RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 RBM26Q5T8P6 1007 aaKnown RBP4.95□□□□□ -1.62
USP46-205ENST00000504078 CIAPIN1Q6FI81 312 aa4.95□□□□□ -1.62
USP46-205ENST00000504078 STYK1Q6J9G0 422 aa4.95□□□□□ -1.62
USP46-205ENST00000504078 NBPF5PQ86XG9 351 aaPredicted RBP4.95□□□□□ -1.62
USP46-205ENST00000504078 DZIP3Q86Y13 1208 aaKnown RBP4.95□□□□□ -1.62
USP46-205ENST00000504078 TTC5Q8N0Z6 440 aa4.95□□□□□ -1.62
USP46-205ENST00000504078 NLRP7Q8WX94 980 aa4.95□□□□□ -1.62
USP46-205ENST00000504078 CNKSR1Q969H4 720 aa4.95□□□□□ -1.62
USP46-205ENST00000504078 SCARF2Q96GP6 870 aaPredicted RBP4.95□□□□□ -1.62
USP46-205ENST00000504078 ZNF496Q96IT1 587 aaPredicted RBP4.95□□□□□ -1.62
USP46-205ENST00000504078 CNTNAP3BQ96NU0 1288 aa4.95□□□□□ -1.62
USP46-205ENST00000504078 GPR101Q96P66 508 aaPredicted RBP4.95□□□□□ -1.62
USP46-205ENST00000504078 ZIC5Q96T25 663 aa4.95□□□□□ -1.62
USP46-205ENST00000504078 BRIP1Q9BX63 1249 aa4.95□□□□□ -1.62
USP46-205ENST00000504078 CNTNAP3Q9BZ76 1288 aa4.95□□□□□ -1.62
USP46-205ENST00000504078 GLIS2Q9BZE0 524 aaPredicted RBP4.95□□□□□ -1.62
USP46-205ENST00000504078 LAMB4A4D0S4 1761 aa4.95□□□□□ -1.62
USP46-205ENST00000504078 SNED1Q8TER0 1413 aa4.95□□□□□ -1.62
USP46-205ENST00000504078 SHTN1A0MZ66 631 aa4.94□□□□□ -1.62
USP46-205ENST00000504078 CELF2O95319 508 aaKnown RBP4.94□□□□□ -1.62
USP46-205ENST00000504078 TIMP2P16035 220 aa4.94□□□□□ -1.62
USP46-205ENST00000504078 LMOD1P29536 600 aaPredicted RBP4.94□□□□□ -1.62
USP46-205ENST00000504078 IL13P35225 146 aa4.94□□□□□ -1.62
USP46-205ENST00000504078 SCNN1DP51172 638 aa4.94□□□□□ -1.62
USP46-205ENST00000504078 EIF5P55010 431 aaKnown RBP4.94□□□□□ -1.62
USP46-205ENST00000504078 MARSP56192 900 aaKnown RBP4.94□□□□□ -1.62
USP46-205ENST00000504078 USP46P62068 366 aa4.94□□□□□ -1.62
USP46-205ENST00000504078 SH3BP2P78314 561 aa4.94□□□□□ -1.62
USP46-205ENST00000504078 KRT76Q01546 638 aa4.94□□□□□ -1.62
USP46-205ENST00000504078 NNTQ13423 1086 aa4.94□□□□□ -1.62
USP46-205ENST00000504078 MTHFSDQ2M296 383 aaKnown RBP4.94□□□□□ -1.62
USP46-205ENST00000504078 CDCA8Q53HL2 280 aa4.94□□□□□ -1.62
USP46-205ENST00000504078 ZNF385CQ66K41 422 aaPredicted RBP4.94□□□□□ -1.62
USP46-205ENST00000504078 MORC1Q86VD1 984 aa4.94□□□□□ -1.62
USP46-205ENST00000504078 NUTM1Q86Y26 1132 aa4.94□□□□□ -1.62
USP46-205ENST00000504078 SYNE4Q8N205 404 aa4.94□□□□□ -1.62
USP46-205ENST00000504078 SVOPQ8N4V2 548 aa4.94□□□□□ -1.62
USP46-205ENST00000504078 MASTLQ96GX5 879 aa4.94□□□□□ -1.62
USP46-205ENST00000504078 PSMG3-AS1Q96PY0 264 aa4.94□□□□□ -1.62
USP46-205ENST00000504078 SETDB2Q96T68 719 aa4.94□□□□□ -1.62
USP46-205ENST00000504078 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.93□□□□□ -1.62
USP46-205ENST00000504078 KDM4AO75164 1064 aa4.93□□□□□ -1.62
USP46-205ENST00000504078 STARD3NLO95772 234 aa4.93□□□□□ -1.62
USP46-205ENST00000504078 VARSP26640 1264 aaKnown RBP4.93□□□□□ -1.62
USP46-205ENST00000504078 ECE1P42892 770 aa4.93□□□□□ -1.62
USP46-205ENST00000504078 WDR4P57081 412 aaKnown RBP4.93□□□□□ -1.62
USP46-205ENST00000504078 SOGA3Q5TF21 947 aa4.93□□□□□ -1.62
USP46-205ENST00000504078 CST9Q5W186 159 aa4.93□□□□□ -1.62
USP46-205ENST00000504078 PTCRAQ6ISU1 281 aaPredicted RBP4.93□□□□□ -1.62
USP46-205ENST00000504078 TRPM4Q8TD43 1214 aa4.93□□□□□ -1.62
USP46-205ENST00000504078 ZNF428Q96B54 188 aa4.93□□□□□ -1.62
USP46-205ENST00000504078 NUDT12Q9BQG2 462 aa4.93□□□□□ -1.62
USP46-205ENST00000504078 KLF16Q9BXK1 252 aaPredicted RBP4.93□□□□□ -1.62
USP46-205ENST00000504078 PANK3Q9H999 370 aa4.93□□□□□ -1.62
USP46-205ENST00000504078 TLL2Q9Y6L7 1015 aa4.93□□□□□ -1.62
USP46-205ENST00000504078 COL3A1P02461 1466 aaPredicted RBP4.93□□□□□ -1.62
USP46-205ENST00000504078 A0A087WZG4 1122 aa4.92□□□□□ -1.62
USP46-205ENST00000504078 TESPA1A2RU30 521 aaPredicted RBP4.92□□□□□ -1.62
USP46-205ENST00000504078 FZD9O00144 591 aa4.92□□□□□ -1.62
USP46-205ENST00000504078 MSTNO14793 375 aa4.92□□□□□ -1.62
USP46-205ENST00000504078 ARHGEF15O94989 841 aa4.92□□□□□ -1.62
USP46-205ENST00000504078 NPR1P16066 1061 aa4.92□□□□□ -1.62
USP46-205ENST00000504078 RGS19P49795 217 aa4.92□□□□□ -1.62
USP46-205ENST00000504078 EIF6P56537 245 aaKnown RBP4.92□□□□□ -1.62
USP46-205ENST00000504078 TEFQ10587 303 aa4.92□□□□□ -1.62
USP46-205ENST00000504078 AOC3Q16853 763 aa4.92□□□□□ -1.62
USP46-205ENST00000504078 NPM2Q86SE8 214 aaKnown RBP4.92□□□□□ -1.62
USP46-205ENST00000504078 PNMA8AQ86V59 439 aaPredicted RBP4.92□□□□□ -1.62
USP46-205ENST00000504078 NIM1KQ8IY84 436 aa4.92□□□□□ -1.62
USP46-205ENST00000504078 GPC2Q8N158 579 aa4.92□□□□□ -1.62
USP46-205ENST00000504078 LARGE2Q8N3Y3 721 aa4.92□□□□□ -1.62
USP46-205ENST00000504078 NGEFQ8N5V2 710 aa4.92□□□□□ -1.62
USP46-205ENST00000504078 GPR161Q8N6U8 529 aaKnown RBP4.92□□□□□ -1.62
USP46-205ENST00000504078 C7orf43Q8WVR3 580 aa4.92□□□□□ -1.62
USP46-205ENST00000504078 KRTAP9-2Q9BYQ4 174 aa4.92□□□□□ -1.62
USP46-205ENST00000504078 NIP7Q9Y221 180 aaKnown RBP eCLIP4.92□□□□□ -1.62
USP46-205ENST00000504078 COL4A1P02462 1669 aa4.92□□□□□ -1.62
USP46-205ENST00000504078 DUOX1Q9NRD9 1551 aa4.91□□□□□ -1.62
USP46-205ENST00000504078 LAMB2P55268 1798 aa4.91□□□□□ -1.62
USP46-205ENST00000504078 ADM5C9JUS6 153 aa4.91□□□□□ -1.62
USP46-205ENST00000504078 U2SURPO15042 1029 aaKnown RBP4.91□□□□□ -1.62
USP46-205ENST00000504078 PPIP5K2O43314 1243 aa4.91□□□□□ -1.62
USP46-205ENST00000504078 SLURP2P0DP57 97 aa4.91□□□□□ -1.62
USP46-205ENST00000504078 CD46P15529 392 aa4.91□□□□□ -1.62
USP46-205ENST00000504078 GPTP24298 496 aa4.91□□□□□ -1.62
USP46-205ENST00000504078 IL6STP40189 918 aaPredicted RBP4.91□□□□□ -1.62
USP46-205ENST00000504078 GMPSP49915 693 aaPredicted RBP4.91□□□□□ -1.62
USP46-205ENST00000504078 HLFQ16534 295 aa4.91□□□□□ -1.62
USP46-205ENST00000504078 ZNF790Q6PG37 636 aa4.91□□□□□ -1.62
USP46-205ENST00000504078 SAPCD2Q86UD0 394 aa4.91□□□□□ -1.62
USP46-205ENST00000504078 VSIG10Q8N0Z9 540 aa4.91□□□□□ -1.62
USP46-205ENST00000504078 NANOS1Q8WY41 292 aaKnown RBP4.91□□□□□ -1.62
USP46-205ENST00000504078 JDP2Q8WYK2 163 aa4.91□□□□□ -1.62
USP46-205ENST00000504078 COL25A1Q9BXS0 654 aaPredicted RBP4.91□□□□□ -1.62
USP46-205ENST00000504078 NPC1L1Q9UHC9 1359 aa4.91□□□□□ -1.62
USP46-205ENST00000504078 RIC1Q4ADV7 1423 aa4.9□□□□□ -1.62
USP46-205ENST00000504078 GPR37O15354 613 aa4.9□□□□□ -1.63
USP46-205ENST00000504078 RAD17O75943 681 aa4.9□□□□□ -1.63
USP46-205ENST00000504078 UPP2O95045 317 aa4.9□□□□□ -1.63
USP46-205ENST00000504078 GTF2E1P29083 439 aaPredicted RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms