RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 ZIC5Q96T25 663 aa27.68■■■□□ 2.02
LSM6-203ENST00000503982 AKAP11Q9UKA4 1901 aa27.68■■■□□ 2.02
LSM6-203ENST00000503982 MROH5Q6ZUA9 1318 aa27.67■■■□□ 2.02
LSM6-203ENST00000503982 VPS37DQ86XT2 251 aa27.67■■■□□ 2.02
LSM6-203ENST00000503982 APOBEC3FQ8IUX4 373 aaKnown RBP27.67■■■□□ 2.02
LSM6-203ENST00000503982 ECM29Q5VYK3 1845 aa27.67■■■□□ 2.02
LSM6-203ENST00000503982 HIBADHP31937 336 aaKnown RBP27.66■■■□□ 2.02
LSM6-203ENST00000503982 GYG1P46976 350 aa27.66■■■□□ 2.02
LSM6-203ENST00000503982 RBM5P52756 815 aaKnown RBP eCLIP27.66■■■□□ 2.02
LSM6-203ENST00000503982 FKBP1BP68106 108 aa27.66■■■□□ 2.02
LSM6-203ENST00000503982 KIF23Q02241 960 aaPredicted RBP27.66■■■□□ 2.02
LSM6-203ENST00000503982 CERS5Q8N5B7 392 aa27.66■■■□□ 2.02
LSM6-203ENST00000503982 ANKRD44Q8N8A2 993 aa27.66■■■□□ 2.02
LSM6-203ENST00000503982 RABL6Q3YEC7 729 aaPredicted RBP27.65■■■□□ 2.02
LSM6-203ENST00000503982 MOB2Q70IA6 237 aa27.65■■■□□ 2.02
LSM6-203ENST00000503982 CASP8AP2Q9UKL3 1982 aa27.65■■■□□ 2.02
LSM6-203ENST00000503982 FAM155AB1AL88 458 aaPredicted RBP27.64■■■□□ 2.02
LSM6-203ENST00000503982 UBE2Q2LH0YL09 131 aa27.64■■■□□ 2.02
LSM6-203ENST00000503982 MYO1BO43795 1136 aa27.64■■■□□ 2.02
LSM6-203ENST00000503982 FRAT2O75474 233 aaPredicted RBP27.64■■■□□ 2.02
LSM6-203ENST00000503982 SLC10A3P09131 477 aa27.64■■■□□ 2.02
LSM6-203ENST00000503982 PRKG1Q13976 671 aa27.64■■■□□ 2.02
LSM6-203ENST00000503982 LRRC24Q50LG9 513 aa27.64■■■□□ 2.02
LSM6-203ENST00000503982 USP44Q9H0E7 712 aa27.64■■■□□ 2.02
LSM6-203ENST00000503982 NOB1Q9ULX3 412 aaKnown RBP27.64■■■□□ 2.02
LSM6-203ENST00000503982 CT47B1P0C2W7 299 aaPredicted RBP27.63■■■□□ 2.01
LSM6-203ENST00000503982 CFAP100Q494V2 611 aa27.63■■■□□ 2.01
LSM6-203ENST00000503982 TRMT2AQ8IZ69 625 aaKnown RBP27.63■■■□□ 2.01
LSM6-203ENST00000503982 KLHDC4Q8TBB5 520 aa27.63■■■□□ 2.01
LSM6-203ENST00000503982 RIPOR2Q9Y4F9 1068 aa27.63■■■□□ 2.01
LSM6-203ENST00000503982 FKBP1AP62942 108 aaKnown RBP27.62■■■□□ 2.01
LSM6-203ENST00000503982 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.62■■■□□ 2.01
LSM6-203ENST00000503982 CAVIN4Q5BKX8 364 aa27.61■■■□□ 2.01
LSM6-203ENST00000503982 API5Q9BZZ5 524 aaKnown RBP27.61■■■□□ 2.01
LSM6-203ENST00000503982 VEZTQ9HBM0 779 aa27.61■■■□□ 2.01
LSM6-203ENST00000503982 CLRN2A0PK11 232 aa27.6■■■□□ 2.01
LSM6-203ENST00000503982 UBTFL1P0CB47 393 aaPredicted RBP27.6■■■□□ 2.01
LSM6-203ENST00000503982 CHAF1AQ13111 956 aaPredicted RBP27.6■■■□□ 2.01
LSM6-203ENST00000503982 MFSD14BQ5SR56 506 aa27.6■■■□□ 2.01
LSM6-203ENST00000503982 ARMC9Q7Z3E5 817 aa27.6■■■□□ 2.01
LSM6-203ENST00000503982 RASAL3Q86YV0 1011 aa27.6■■■□□ 2.01
LSM6-203ENST00000503982 FAM84BQ96KN1 310 aaPredicted RBP27.6■■■□□ 2.01
LSM6-203ENST00000503982 IQSEC3Q9UPP2 1182 aaPredicted RBP27.6■■■□□ 2.01
LSM6-203ENST00000503982 TDRD7Q8NHU6 1098 aaKnown RBP27.59■■■□□ 2.01
LSM6-203ENST00000503982 PCDHAC2Q9Y5I4 1007 aa27.59■■■□□ 2.01
LSM6-203ENST00000503982 ZBED3Q96IU2 234 aaPredicted RBP27.58■■■□□ 2.01
LSM6-203ENST00000503982 TTF2Q9UNY4 1162 aaKnown RBP27.58■■■□□ 2.01
LSM6-203ENST00000503982 FAM205AQ6ZU69 1335 aa27.58■■■□□ 2.01
LSM6-203ENST00000503982 ARAP2Q8WZ64 1704 aa27.58■■■□□ 2.01
LSM6-203ENST00000503982 TRPA1O75762 1119 aa27.57■■■□□ 2
LSM6-203ENST00000503982 PDE8BO95263 885 aa27.57■■■□□ 2
LSM6-203ENST00000503982 MTMR14Q8NCE2 650 aa27.57■■■□□ 2
LSM6-203ENST00000503982 DEFB129Q9H1M3 183 aa27.57■■■□□ 2
LSM6-203ENST00000503982 MYH13Q9UKX3 1938 aa27.57■■■□□ 2
LSM6-203ENST00000503982 ANGEL1Q9UNK9 670 aaKnown RBP27.56■■■□□ 2
LSM6-203ENST00000503982 COL1A1P02452 1464 aaPredicted RBP27.56■■■□□ 2
LSM6-203ENST00000503982 SPDYE2BA6NHP3 402 aa27.55■■■□□ 2
LSM6-203ENST00000503982 IFIT1P09914 478 aaKnown RBP27.55■■■□□ 2
LSM6-203ENST00000503982 SPDYE6P0CI01 402 aa27.55■■■□□ 2
LSM6-203ENST00000503982 MKRN3Q13064 507 aaKnown RBP27.55■■■□□ 2
LSM6-203ENST00000503982 ABHD8Q96I13 439 aa27.55■■■□□ 2
LSM6-203ENST00000503982 PRMT6Q96LA8 375 aaPredicted RBP27.55■■■□□ 2
LSM6-203ENST00000503982 CSRNP1Q96S65 589 aa27.55■■■□□ 2
LSM6-203ENST00000503982 HDAC5Q9UQL6 1122 aa27.55■■■□□ 2
LSM6-203ENST00000503982 REM2Q8IYK8 340 aaPredicted RBP27.54■■■□□ 2
LSM6-203ENST00000503982 SIL1Q9H173 461 aa27.54■■■□□ 2
LSM6-203ENST00000503982 RNF186Q9NXI6 227 aa27.54■■■□□ 2
LSM6-203ENST00000503982 KIF16BQ96L93 1317 aa27.53■■■□□ 2
LSM6-203ENST00000503982 EYA2O00167 538 aa27.53■■■□□ 2
LSM6-203ENST00000503982 RARSP54136 660 aaKnown RBP27.53■■■□□ 2
LSM6-203ENST00000503982 PUM3Q15397 648 aaKnown RBP27.53■■■□□ 2
LSM6-203ENST00000503982 SAGE1Q9NXZ1 904 aa27.53■■■□□ 2
LSM6-203ENST00000503982 SLC5A1P13866 664 aa27.52■■■□□ 2
LSM6-203ENST00000503982 FBXO33Q7Z6M2 555 aa27.52■■■□□ 2
LSM6-203ENST00000503982 PPP2R3BQ9Y5P8 575 aa27.52■■■□□ 2
LSM6-203ENST00000503982 BCAMP50895 628 aa27.51■■□□□ 1.99
LSM6-203ENST00000503982 VGLL2Q8N8G2 317 aa27.51■■□□□ 1.99
LSM6-203ENST00000503982 TBC1D22AQ8WUA7 517 aa27.51■■□□□ 1.99
LSM6-203ENST00000503982 FZD1Q9UP38 647 aa27.51■■□□□ 1.99
LSM6-203ENST00000503982 LRRFIP2Q9Y608 721 aaKnown RBP27.51■■□□□ 1.99
LSM6-203ENST00000503982 PPP1R12BO60237 982 aaPredicted RBP27.5■■□□□ 1.99
LSM6-203ENST00000503982 PTPN12Q05209 780 aaKnown RBP27.5■■□□□ 1.99
LSM6-203ENST00000503982 DGKZQ13574 1117 aa27.5■■□□□ 1.99
LSM6-203ENST00000503982 SUPT20HL1Q3ZLR7 823 aa27.5■■□□□ 1.99
LSM6-203ENST00000503982 TDRD3Q9H7E2 651 aaKnown RBP27.5■■□□□ 1.99
LSM6-203ENST00000503982 SERPINA10Q9UK55 444 aa27.5■■□□□ 1.99
LSM6-203ENST00000503982 CCDC85CA6NKD9 419 aa27.49■■□□□ 1.99
LSM6-203ENST00000503982 CRKP46108 304 aa27.49■■□□□ 1.99
LSM6-203ENST00000503982 RFX5P48382 616 aaPredicted RBP27.49■■□□□ 1.99
LSM6-203ENST00000503982 FRAT1Q92837 279 aaPredicted RBP27.49■■□□□ 1.99
LSM6-203ENST00000503982 TNFAIP1Q13829 316 aa27.48■■□□□ 1.99
LSM6-203ENST00000503982 ZNF70Q9UC06 446 aaPredicted RBP27.48■■□□□ 1.99
LSM6-203ENST00000503982 AOX1Q06278 1338 aa27.47■■□□□ 1.99
LSM6-203ENST00000503982 RASA3Q14644 834 aa27.47■■□□□ 1.99
LSM6-203ENST00000503982 DZIP1LQ8IYY4 767 aaKnown RBP27.47■■□□□ 1.99
LSM6-203ENST00000503982 LPIN2Q92539 896 aa27.47■■□□□ 1.99
LSM6-203ENST00000503982 SLC10A4Q96EP9 437 aa27.47■■□□□ 1.99
LSM6-203ENST00000503982 MCOLN1Q9GZU1 580 aa27.47■■□□□ 1.99
LSM6-203ENST00000503982 CEP126Q9P2H0 1117 aa27.47■■□□□ 1.99
LSM6-203ENST00000503982 IPO8O15397 1037 aaKnown RBP27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms