RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 NUTM2GQ5VZR2 741 aa5.46□□□□□ -1.54
NDFIP1-202ENST00000503388 DHX32Q7L7V1 743 aaKnown RBP5.46□□□□□ -1.54
NDFIP1-202ENST00000503388 PLEKHM2Q8IWE5 1019 aa5.46□□□□□ -1.54
NDFIP1-202ENST00000503388 MRPS27Q92552 414 aaKnown RBP5.46□□□□□ -1.54
NDFIP1-202ENST00000503388 CALML4Q96GE6 196 aa5.46□□□□□ -1.54
NDFIP1-202ENST00000503388 MPHOSPH6Q99547 160 aaKnown RBP5.46□□□□□ -1.54
NDFIP1-202ENST00000503388 MTA3Q9BTC8 594 aa5.46□□□□□ -1.54
NDFIP1-202ENST00000503388 USP26Q9BXU7 913 aa5.46□□□□□ -1.54
NDFIP1-202ENST00000503388 PI4KAP2A4QPH2 592 aa5.46□□□□□ -1.54
NDFIP1-202ENST00000503388 GOLGA8AA7E2F4 631 aa5.46□□□□□ -1.54
NDFIP1-202ENST00000503388 GOLGA8BA8MQT2 603 aa5.46□□□□□ -1.54
NDFIP1-202ENST00000503388 KRT18P05783 430 aaKnown RBP5.46□□□□□ -1.54
NDFIP1-202ENST00000503388 HOXC9P31274 260 aa5.46□□□□□ -1.54
NDFIP1-202ENST00000503388 PAFAH1B1P43034 410 aa5.46□□□□□ -1.54
NDFIP1-202ENST00000503388 USP5P45974 858 aa5.46□□□□□ -1.54
NDFIP1-202ENST00000503388 BMS1Q14692 1282 aaKnown RBP5.46□□□□□ -1.54
NDFIP1-202ENST00000503388 C20orf194Q5TEA3 1177 aa5.46□□□□□ -1.54
NDFIP1-202ENST00000503388 FBXO31Q5XUX0 539 aaPredicted RBP5.46□□□□□ -1.54
NDFIP1-202ENST00000503388 CNPY4Q8N129 248 aa5.46□□□□□ -1.54
NDFIP1-202ENST00000503388 PI4KAP1Q8N8J0 262 aa5.46□□□□□ -1.54
NDFIP1-202ENST00000503388 ERMNQ8TAM6 284 aa5.46□□□□□ -1.54
NDFIP1-202ENST00000503388 ALS2CR12Q96Q35 445 aa5.46□□□□□ -1.54
NDFIP1-202ENST00000503388 TAOK3Q9H2K8 898 aa5.46□□□□□ -1.54
NDFIP1-202ENST00000503388 CALCOCO1Q9P1Z2 691 aa5.46□□□□□ -1.54
NDFIP1-202ENST00000503388 ZKSCAN5Q9Y2L8 839 aa5.46□□□□□ -1.54
NDFIP1-202ENST00000503388 BICDL2A1A5D9 508 aa5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 B4DLN1 442 aa5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 MRPL12P52815 198 aaKnown RBP5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 MFSD6Q6ZSS7 791 aa5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 CCAR2Q8N163 923 aaKnown RBP5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 PDILTQ8N807 584 aa5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 CUL5Q93034 780 aa5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 FEZ1Q99689 392 aa5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 V9GYY5 206 aaPredicted RBP5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 MAST3O60307 1309 aa5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 ABCC12Q96J65 1359 aa5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 COL3A1P02461 1466 aaPredicted RBP5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 CCDC194A0A1B0GVG4 234 aa5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 RNMTO43148 476 aaKnown RBP5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 ZPR1O75312 459 aa5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 CHMLP26374 656 aa5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 GJB2P29033 226 aa5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 ZNF165P49910 485 aa5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 ZNF444Q8N0Y2 327 aaPredicted RBP5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 DSCC1Q9BVC3 393 aa5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 IL1RAPL2Q9NP60 686 aa5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 RAI14Q9P0K7 980 aa5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 USP31Q70CQ4 1352 aa5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 RNF113AO15541 343 aaKnown RBP5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 CYLC1P35663 651 aaPredicted RBP5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 FKBP4Q02790 459 aaKnown RBP eCLIP5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 RILPL1Q5EBL4 403 aa5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 SYTL4Q96C24 671 aaPredicted RBP5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 METTL22Q9BUU2 404 aaPredicted RBP5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 TTC12Q9H892 705 aaPredicted RBP5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 ORC3Q9UBD5 711 aaPredicted RBP5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 OVOS2A0A0G2JMS6 1433 aa5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 MAP3K19Q56UN5 1328 aa5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 KIAA0754O94854 1291 aa5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 HLA-DOAP06340 250 aa5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 IL2RBP14784 551 aa5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 METAP2P50579 478 aaKnown RBP eCLIP5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 CFAP100Q494V2 611 aa5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 RUFY3Q7L099 469 aa5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 CEP112Q8N8E3 955 aa5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 CNNM3Q8NE01 707 aa5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 SSH3Q8TE77 659 aa5.45□□□□□ -1.54
NDFIP1-202ENST00000503388 KDRP35968 1356 aa5.44□□□□□ -1.54
NDFIP1-202ENST00000503388 ZNF236Q9UL36 1845 aa5.44□□□□□ -1.54
NDFIP1-202ENST00000503388 USP19O94966 1318 aa5.44□□□□□ -1.54
NDFIP1-202ENST00000503388 GOLGA6L10A0A0M3HER8 536 aa5.44□□□□□ -1.54
NDFIP1-202ENST00000503388 IFIT3O14879 490 aaKnown RBP5.44□□□□□ -1.54
NDFIP1-202ENST00000503388 ZBTB43O43298 467 aa5.44□□□□□ -1.54
NDFIP1-202ENST00000503388 PIP4K2BP78356 416 aa5.44□□□□□ -1.54
NDFIP1-202ENST00000503388 KRT83P78385 493 aa5.44□□□□□ -1.54
NDFIP1-202ENST00000503388 ATP2B3Q16720 1220 aa5.44□□□□□ -1.54
NDFIP1-202ENST00000503388 GALNT17Q6IS24 598 aa5.44□□□□□ -1.54
NDFIP1-202ENST00000503388 LDHAL6AQ6ZMR3 332 aa5.44□□□□□ -1.54
NDFIP1-202ENST00000503388 FCHSD1Q86WN1 690 aa5.44□□□□□ -1.54
NDFIP1-202ENST00000503388 FSIP1Q8NA03 581 aa5.44□□□□□ -1.54
NDFIP1-202ENST00000503388 LMBR1Q8WVP7 490 aa5.44□□□□□ -1.54
NDFIP1-202ENST00000503388 CLIP2Q9UDT6 1046 aa5.44□□□□□ -1.54
NDFIP1-202ENST00000503388 RBM8AQ9Y5S9 174 aaKnown RBP5.44□□□□□ -1.54
NDFIP1-202ENST00000503388 DDX60LQ5H9U9 1706 aaKnown RBP5.44□□□□□ -1.54
NDFIP1-202ENST00000503388 UQCRHLA0A096LP55 91 aa5.44□□□□□ -1.54
NDFIP1-202ENST00000503388 UQCRHP07919 91 aa5.44□□□□□ -1.54
NDFIP1-202ENST00000503388 EIF5P55010 431 aaKnown RBP5.44□□□□□ -1.54
NDFIP1-202ENST00000503388 NAP1L1P55209 391 aaKnown RBP5.44□□□□□ -1.54
NDFIP1-202ENST00000503388 ZSCAN23Q3MJ62 389 aa5.44□□□□□ -1.54
NDFIP1-202ENST00000503388 RNF214Q8ND24 703 aa5.44□□□□□ -1.54
NDFIP1-202ENST00000503388 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.44□□□□□ -1.54
NDFIP1-202ENST00000503388 CCDC51Q96ER9 411 aa5.44□□□□□ -1.54
NDFIP1-202ENST00000503388 RPGRIP1Q96KN7 1286 aa5.44□□□□□ -1.54
NDFIP1-202ENST00000503388 NUCKS1Q9H1E3 243 aaKnown RBP5.44□□□□□ -1.54
NDFIP1-202ENST00000503388 TRMT112Q9UI30 125 aaKnown RBP5.44□□□□□ -1.54
NDFIP1-202ENST00000503388 USP16Q9Y5T5 823 aa5.44□□□□□ -1.54
NDFIP1-202ENST00000503388 RGS12O14924 1447 aa5.44□□□□□ -1.54
NDFIP1-202ENST00000503388 SYCE3A1L190 88 aa5.44□□□□□ -1.54
NDFIP1-202ENST00000503388 IDH1O75874 414 aaKnown RBP5.44□□□□□ -1.54
NDFIP1-202ENST00000503388 GNA11P29992 359 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms