RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 SHTN1A0MZ66 631 aa30.94■■■□□ 2.54
LSM6-202ENST00000502781 FBXW7Q969H0 707 aa30.94■■■□□ 2.54
LSM6-202ENST00000502781 EAF2Q96CJ1 260 aaPredicted RBP30.94■■■□□ 2.54
LSM6-202ENST00000502781 KIF1BPQ96EK5 621 aa30.94■■■□□ 2.54
LSM6-202ENST00000502781 ZNF280AP59817 542 aaPredicted RBP30.93■■■□□ 2.54
LSM6-202ENST00000502781 ADARB2Q9NS39 739 aaKnown RBP30.93■■■□□ 2.54
LSM6-202ENST00000502781 TOMM70O94826 608 aa30.92■■■□□ 2.54
LSM6-202ENST00000502781 PNMA8AQ86V59 439 aaPredicted RBP30.92■■■□□ 2.54
LSM6-202ENST00000502781 GNL3LQ9NVN8 582 aaKnown RBP30.92■■■□□ 2.54
LSM6-202ENST00000502781 SEMA3EO15041 775 aa30.92■■■□□ 2.54
LSM6-202ENST00000502781 USP50Q70EL3 339 aaPredicted RBP30.92■■■□□ 2.54
LSM6-202ENST00000502781 JAG2Q9Y219 1238 aa30.92■■■□□ 2.54
LSM6-202ENST00000502781 COL1A1P02452 1464 aaPredicted RBP30.91■■■□□ 2.54
LSM6-202ENST00000502781 H7C1D1 291 aa30.91■■■□□ 2.54
LSM6-202ENST00000502781 USP17L8P0C7I0 530 aa30.91■■■□□ 2.54
LSM6-202ENST00000502781 HDAC1Q13547 482 aaPredicted RBP30.91■■■□□ 2.54
LSM6-202ENST00000502781 C16orf71Q8IYS4 520 aaPredicted RBP30.91■■■□□ 2.54
LSM6-202ENST00000502781 DBNDD2Q9BQY9 259 aa30.91■■■□□ 2.54
LSM6-202ENST00000502781 DBNLQ9UJU6 430 aaKnown RBP30.91■■■□□ 2.54
LSM6-202ENST00000502781 FRAT2O75474 233 aaPredicted RBP30.9■■■□□ 2.54
LSM6-202ENST00000502781 POTEIP0CG38 1075 aa30.9■■■□□ 2.54
LSM6-202ENST00000502781 POTEJP0CG39 1038 aa30.9■■■□□ 2.54
LSM6-202ENST00000502781 MMP14P50281 582 aa30.9■■■□□ 2.54
LSM6-202ENST00000502781 IRX6P78412 446 aaPredicted RBP30.9■■■□□ 2.54
LSM6-202ENST00000502781 MFSD14BQ5SR56 506 aa30.9■■■□□ 2.54
LSM6-202ENST00000502781 RBM46Q8TBY0 533 aaKnown RBP30.9■■■□□ 2.54
LSM6-202ENST00000502781 IL1RAPL2Q9NP60 686 aa30.9■■■□□ 2.54
LSM6-202ENST00000502781 TBC1D22AQ8WUA7 517 aa30.89■■■□□ 2.54
LSM6-202ENST00000502781 PDS5AQ29RF7 1337 aaKnown RBP30.88■■■□□ 2.53
LSM6-202ENST00000502781 ADAMTSL1Q8N6G6 1762 aa30.88■■■□□ 2.53
LSM6-202ENST00000502781 APBB1O00213 710 aa30.88■■■□□ 2.53
LSM6-202ENST00000502781 ARID4AP29374 1257 aaPredicted RBP30.88■■■□□ 2.53
LSM6-202ENST00000502781 CHAF1AQ13111 956 aaPredicted RBP30.88■■■□□ 2.53
LSM6-202ENST00000502781 TRPM4Q8TD43 1214 aa30.88■■■□□ 2.53
LSM6-202ENST00000502781 DENND2AQ9ULE3 1009 aa30.88■■■□□ 2.53
LSM6-202ENST00000502781 HIRAP54198 1017 aaPredicted RBP30.87■■■□□ 2.53
LSM6-202ENST00000502781 RASGRF1Q13972 1273 aa30.87■■■□□ 2.53
LSM6-202ENST00000502781 GORABQ5T7V8 394 aa30.87■■■□□ 2.53
LSM6-202ENST00000502781 SAMD7Q7Z3H4 446 aa30.87■■■□□ 2.53
LSM6-202ENST00000502781 LDHDQ86WU2 507 aa30.87■■■□□ 2.53
LSM6-202ENST00000502781 CLASRPQ8N2M8 674 aaKnown RBP30.87■■■□□ 2.53
LSM6-202ENST00000502781 CCDC8Q9H0W5 538 aaPredicted RBP30.87■■■□□ 2.53
LSM6-202ENST00000502781 TLR7Q9NYK1 1049 aaKnown RBP30.87■■■□□ 2.53
LSM6-202ENST00000502781 EGFRP00533 1210 aa30.86■■■□□ 2.53
LSM6-202ENST00000502781 EAPPQ56P03 285 aaPredicted RBP30.86■■■□□ 2.53
LSM6-202ENST00000502781 AACSQ86V21 672 aa30.86■■■□□ 2.53
LSM6-202ENST00000502781 KIAA0825Q8IV33 1275 aa30.86■■■□□ 2.53
LSM6-202ENST00000502781 WDR66Q8TBY9 1149 aa30.86■■■□□ 2.53
LSM6-202ENST00000502781 ZNF512BQ96KM6 892 aaPredicted RBP30.86■■■□□ 2.53
LSM6-202ENST00000502781 LRRCC1Q9C099 1032 aa30.86■■■□□ 2.53
LSM6-202ENST00000502781 OGFOD1Q8N543 542 aa30.85■■■□□ 2.53
LSM6-202ENST00000502781 SALL1Q9NSC2 1324 aa30.84■■■□□ 2.53
LSM6-202ENST00000502781 UQCRFS1P1P0C7P4 283 aa30.83■■■□□ 2.53
LSM6-202ENST00000502781 TBC1D10BQ4KMP7 808 aaPredicted RBP30.83■■■□□ 2.53
LSM6-202ENST00000502781 CCDC158Q5M9N0 1113 aa30.83■■■□□ 2.53
LSM6-202ENST00000502781 MYOZ2Q9NPC6 264 aa30.83■■■□□ 2.53
LSM6-202ENST00000502781 PGAP2Q9UHJ9 254 aa30.83■■■□□ 2.53
LSM6-202ENST00000502781 SUGT1Q9Y2Z0 365 aa30.83■■■□□ 2.53
LSM6-202ENST00000502781 GRIK5Q16478 980 aa30.82■■■□□ 2.52
LSM6-202ENST00000502781 KIF4BQ2VIQ3 1234 aa30.82■■■□□ 2.52
LSM6-202ENST00000502781 SMC1BQ8NDV3 1235 aa30.82■■■□□ 2.52
LSM6-202ENST00000502781 ZC3H15Q8WU90 426 aaKnown RBP30.82■■■□□ 2.52
LSM6-202ENST00000502781 HMG20BQ9P0W2 317 aa30.82■■■□□ 2.52
LSM6-202ENST00000502781 HDAC9Q9UKV0 1011 aa30.82■■■□□ 2.52
LSM6-202ENST00000502781 SCARF1Q14162 830 aa30.81■■■□□ 2.52
LSM6-202ENST00000502781 CHADLQ6NUI6 762 aa30.81■■■□□ 2.52
LSM6-202ENST00000502781 CENPBP07199 599 aaPredicted RBP30.8■■■□□ 2.52
LSM6-202ENST00000502781 MCAMP43121 646 aa30.8■■■□□ 2.52
LSM6-202ENST00000502781 FSTL1Q12841 308 aa30.8■■■□□ 2.52
LSM6-202ENST00000502781 SMARCA5O60264 1052 aaPredicted RBP30.79■■■□□ 2.52
LSM6-202ENST00000502781 TTC39AQ5SRH9 613 aa30.79■■■□□ 2.52
LSM6-202ENST00000502781 RBM26Q5T8P6 1007 aaKnown RBP30.79■■■□□ 2.52
LSM6-202ENST00000502781 SPATA5Q8NB90 893 aa30.79■■■□□ 2.52
LSM6-202ENST00000502781 ZBED3Q96IU2 234 aaPredicted RBP30.79■■■□□ 2.52
LSM6-202ENST00000502781 F8W031 263 aaPredicted RBP30.79■■■□□ 2.52
LSM6-202ENST00000502781 PI16Q6UXB8 463 aa30.79■■■□□ 2.52
LSM6-202ENST00000502781 MTMR14Q8NCE2 650 aa30.79■■■□□ 2.52
LSM6-202ENST00000502781 GCC1Q96CN9 775 aa30.79■■■□□ 2.52
LSM6-202ENST00000502781 RWDD1Q9H446 243 aaPredicted RBP30.79■■■□□ 2.52
LSM6-202ENST00000502781 TTF2Q9UNY4 1162 aaKnown RBP30.79■■■□□ 2.52
LSM6-202ENST00000502781 MYH13Q9UKX3 1938 aa30.78■■■□□ 2.52
LSM6-202ENST00000502781 IFIT2P09913 472 aaKnown RBP30.78■■■□□ 2.52
LSM6-202ENST00000502781 CLEC11AQ9Y240 323 aa30.78■■■□□ 2.52
LSM6-202ENST00000502781 IGHDP01880 384 aa30.77■■■□□ 2.52
LSM6-202ENST00000502781 C1QTNF8P60827 252 aa30.77■■■□□ 2.52
LSM6-202ENST00000502781 MRIQ9BWK5 157 aa30.77■■■□□ 2.52
LSM6-202ENST00000502781 WNT10BO00744 389 aa30.76■■■□□ 2.51
LSM6-202ENST00000502781 HDLBPQ00341 1268 aaKnown RBP30.76■■■□□ 2.51
LSM6-202ENST00000502781 SMC5Q8IY18 1101 aa30.76■■■□□ 2.51
LSM6-202ENST00000502781 SERPINA10Q9UK55 444 aa30.76■■■□□ 2.51
LSM6-202ENST00000502781 PRDX5P30044 214 aa30.75■■■□□ 2.51
LSM6-202ENST00000502781 MAP1SQ66K74 1059 aaPredicted RBP30.75■■■□□ 2.51
LSM6-202ENST00000502781 ZGPATQ8N5A5 531 aaKnown RBP30.75■■■□□ 2.51
LSM6-202ENST00000502781 MAST3O60307 1309 aa30.74■■■□□ 2.51
LSM6-202ENST00000502781 NBPF9Q3BBW0 867 aa30.74■■■□□ 2.51
LSM6-202ENST00000502781 AKAP11Q9UKA4 1901 aa30.73■■■□□ 2.51
LSM6-202ENST00000502781 ITGBL1O95965 494 aaPredicted RBP30.73■■■□□ 2.51
LSM6-202ENST00000502781 CFAP100Q494V2 611 aa30.73■■■□□ 2.51
LSM6-202ENST00000502781 ASTN2O75129 1339 aaPredicted RBP30.72■■■□□ 2.51
LSM6-202ENST00000502781 SPDYE2BA6NHP3 402 aa30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms