RNA–Protein interactions for RNA: ENST00000502690.5

UBE2D3-213, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-213ENST00000502690 NBPF7P0C2Y1 421 aaPredicted RBP21.59■■□□□ 1.05
UBE2D3-213ENST00000502690 PRKG1Q13976 671 aa21.59■■□□□ 1.05
UBE2D3-213ENST00000502690 TTLL12Q14166 644 aaPredicted RBP21.59■■□□□ 1.05
UBE2D3-213ENST00000502690 SRCIN1Q9C0H9 1055 aa21.59■■□□□ 1.05
UBE2D3-213ENST00000502690 C9orf78Q9NZ63 289 aaPredicted RBP21.59■■□□□ 1.05
UBE2D3-213ENST00000502690 MKRN3Q13064 507 aaKnown RBP21.58■■□□□ 1.05
UBE2D3-213ENST00000502690 CCDC57Q2TAC2 916 aa21.58■■□□□ 1.05
UBE2D3-213ENST00000502690 LDHAL6AQ6ZMR3 332 aa21.58■■□□□ 1.05
UBE2D3-213ENST00000502690 HDAC9Q9UKV0 1011 aa21.58■■□□□ 1.05
UBE2D3-213ENST00000502690 PTPN12Q05209 780 aaKnown RBP21.57■■□□□ 1.04
UBE2D3-213ENST00000502690 TAF7LQ5H9L4 462 aa21.57■■□□□ 1.04
UBE2D3-213ENST00000502690 ZNF804AQ7Z570 1209 aa21.57■■□□□ 1.04
UBE2D3-213ENST00000502690 APOBEC3FQ8IUX4 373 aaKnown RBP21.57■■□□□ 1.04
UBE2D3-213ENST00000502690 CNNM1Q9NRU3 951 aa21.57■■□□□ 1.04
UBE2D3-213ENST00000502690 CLRN2A0PK11 232 aa21.56■■□□□ 1.04
UBE2D3-213ENST00000502690 MRPL50Q8N5N7 158 aaKnown RBP21.56■■□□□ 1.04
UBE2D3-213ENST00000502690 UTYO14607 1347 aa21.55■■□□□ 1.04
UBE2D3-213ENST00000502690 GYG1P46976 350 aa21.55■■□□□ 1.04
UBE2D3-213ENST00000502690 DLGAP5Q15398 846 aa21.55■■□□□ 1.04
UBE2D3-213ENST00000502690 CFAP100Q494V2 611 aa21.55■■□□□ 1.04
UBE2D3-213ENST00000502690 ANKRD44Q8N8A2 993 aa21.55■■□□□ 1.04
UBE2D3-213ENST00000502690 MTMR14Q8NCE2 650 aa21.55■■□□□ 1.04
UBE2D3-213ENST00000502690 PRMT6Q96LA8 375 aaPredicted RBP21.55■■□□□ 1.04
UBE2D3-213ENST00000502690 COL1A1P02452 1464 aaPredicted RBP21.55■■□□□ 1.04
UBE2D3-213ENST00000502690 MMP14P50281 582 aa21.54■■□□□ 1.04
UBE2D3-213ENST00000502690 DEFB129Q9H1M3 183 aa21.54■■□□□ 1.04
UBE2D3-213ENST00000502690 BICC1Q9H694 974 aaKnown RBP21.54■■□□□ 1.04
UBE2D3-213ENST00000502690 SPDYE2BA6NHP3 402 aa21.53■■□□□ 1.04
UBE2D3-213ENST00000502690 SPDYE6P0CI01 402 aa21.53■■□□□ 1.04
UBE2D3-213ENST00000502690 NF2P35240 595 aa21.53■■□□□ 1.04
UBE2D3-213ENST00000502690 RGS19P49795 217 aa21.53■■□□□ 1.04
UBE2D3-213ENST00000502690 ANGEL1Q9UNK9 670 aaKnown RBP21.53■■□□□ 1.04
UBE2D3-213ENST00000502690 TNRC18O15417 2968 aaPredicted RBP21.53■■□□□ 1.04
UBE2D3-213ENST00000502690 TBC1D8O95759 1140 aa21.52■■□□□ 1.04
UBE2D3-213ENST00000502690 FKBP1AP62942 108 aaKnown RBP21.52■■□□□ 1.04
UBE2D3-213ENST00000502690 LDLRAD1Q5T700 205 aa21.52■■□□□ 1.04
UBE2D3-213ENST00000502690 TDRD7Q8NHU6 1098 aaKnown RBP21.52■■□□□ 1.04
UBE2D3-213ENST00000502690 SSH1Q8WYL5 1049 aa21.52■■□□□ 1.04
UBE2D3-213ENST00000502690 RIPOR2Q9Y4F9 1068 aa21.52■■□□□ 1.04
UBE2D3-213ENST00000502690 MYH13Q9UKX3 1938 aa21.52■■□□□ 1.04
UBE2D3-213ENST00000502690 FAM205AQ6ZU69 1335 aa21.52■■□□□ 1.03
UBE2D3-213ENST00000502690 GRIK5Q16478 980 aa21.51■■□□□ 1.03
UBE2D3-213ENST00000502690 RABL6Q3YEC7 729 aaPredicted RBP21.51■■□□□ 1.03
UBE2D3-213ENST00000502690 LRRC24Q50LG9 513 aa21.51■■□□□ 1.03
UBE2D3-213ENST00000502690 REM2Q8IYK8 340 aaPredicted RBP21.51■■□□□ 1.03
UBE2D3-213ENST00000502690 KLHDC4Q8TBB5 520 aa21.51■■□□□ 1.03
UBE2D3-213ENST00000502690 CLMNQ96JQ2 1002 aa21.51■■□□□ 1.03
UBE2D3-213ENST00000502690 FAM84BQ96KN1 310 aaPredicted RBP21.51■■□□□ 1.03
UBE2D3-213ENST00000502690 R3HDMLQ9H3Y0 253 aa21.51■■□□□ 1.03
UBE2D3-213ENST00000502690 TM4SF4P48230 202 aa21.5■■□□□ 1.03
UBE2D3-213ENST00000502690 UBE4AQ14139 1066 aa21.5■■□□□ 1.03
UBE2D3-213ENST00000502690 ARMC9Q7Z3E5 817 aa21.5■■□□□ 1.03
UBE2D3-213ENST00000502690 MLLT1Q03111 559 aaPredicted RBP21.49■■□□□ 1.03
UBE2D3-213ENST00000502690 MFSD14BQ5SR56 506 aa21.49■■□□□ 1.03
UBE2D3-213ENST00000502690 NBPF12Q5TAG4 269 aaPredicted RBP21.49■■□□□ 1.03
UBE2D3-213ENST00000502690 CTU1Q7Z7A3 348 aaKnown RBP21.49■■□□□ 1.03
UBE2D3-213ENST00000502690 CDAN1Q8IWY9 1227 aa21.49■■□□□ 1.03
UBE2D3-213ENST00000502690 CDCA7LQ96GN5 454 aa21.49■■□□□ 1.03
UBE2D3-213ENST00000502690 VEZTQ9HBM0 779 aa21.49■■□□□ 1.03
UBE2D3-213ENST00000502690 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.49■■□□□ 1.03
UBE2D3-213ENST00000502690 IQSEC3Q9UPP2 1182 aaPredicted RBP21.49■■□□□ 1.03
UBE2D3-213ENST00000502690 HIBADHP31937 336 aaKnown RBP21.48■■□□□ 1.03
UBE2D3-213ENST00000502690 SLFN5Q08AF3 891 aa21.48■■□□□ 1.03
UBE2D3-213ENST00000502690 SPRYD7Q5W111 196 aa21.48■■□□□ 1.03
UBE2D3-213ENST00000502690 VGLL2Q8N8G2 317 aa21.48■■□□□ 1.03
UBE2D3-213ENST00000502690 ZNF296Q8WUU4 475 aaPredicted RBP21.48■■□□□ 1.03
UBE2D3-213ENST00000502690 RBM5P52756 815 aaKnown RBP eCLIP21.47■■□□□ 1.03
UBE2D3-213ENST00000502690 MAP3K11Q16584 847 aa21.47■■□□□ 1.03
UBE2D3-213ENST00000502690 USP44Q9H0E7 712 aa21.47■■□□□ 1.03
UBE2D3-213ENST00000502690 TTF2Q9UNY4 1162 aaKnown RBP21.47■■□□□ 1.03
UBE2D3-213ENST00000502690 E9PSI1 815 aa21.46■■□□□ 1.03
UBE2D3-213ENST00000502690 SOX10P56693 466 aa21.46■■□□□ 1.03
UBE2D3-213ENST00000502690 PPP2R3BQ9Y5P8 575 aa21.46■■□□□ 1.03
UBE2D3-213ENST00000502690 PTPRCP08575 1304 aa21.46■■□□□ 1.03
UBE2D3-213ENST00000502690 MROH5Q6ZUA9 1318 aa21.46■■□□□ 1.03
UBE2D3-213ENST00000502690 GJA5P36382 358 aa21.45■■□□□ 1.02
UBE2D3-213ENST00000502690 RASA3Q14644 834 aa21.45■■□□□ 1.02
UBE2D3-213ENST00000502690 FBXO33Q7Z6M2 555 aa21.45■■□□□ 1.02
UBE2D3-213ENST00000502690 TDRD3Q9H7E2 651 aaKnown RBP21.45■■□□□ 1.02
UBE2D3-213ENST00000502690 GPR25O00155 361 aa21.44■■□□□ 1.02
UBE2D3-213ENST00000502690 MYO1BO43795 1136 aa21.44■■□□□ 1.02
UBE2D3-213ENST00000502690 SPDYE2Q495Y8 402 aa21.44■■□□□ 1.02
UBE2D3-213ENST00000502690 METTL24Q5JXM2 366 aa21.44■■□□□ 1.02
UBE2D3-213ENST00000502690 WNK4Q96J92 1243 aa21.44■■□□□ 1.02
UBE2D3-213ENST00000502690 ZNF70Q9UC06 446 aaPredicted RBP21.44■■□□□ 1.02
UBE2D3-213ENST00000502690 SREBF2Q12772 1141 aa21.43■■□□□ 1.02
UBE2D3-213ENST00000502690 CHAF1AQ13111 956 aaPredicted RBP21.43■■□□□ 1.02
UBE2D3-213ENST00000502690 TEPSINQ96N21 525 aa21.43■■□□□ 1.02
UBE2D3-213ENST00000502690 IGF2BP3O00425 579 aaKnown RBP eCLIP21.42■■□□□ 1.02
UBE2D3-213ENST00000502690 USP2O75604 605 aaPredicted RBP21.42■■□□□ 1.02
UBE2D3-213ENST00000502690 CRKP46108 304 aa21.42■■□□□ 1.02
UBE2D3-213ENST00000502690 RFX5P48382 616 aaPredicted RBP21.42■■□□□ 1.02
UBE2D3-213ENST00000502690 DZIP1LQ8IYY4 767 aaKnown RBP21.42■■□□□ 1.02
UBE2D3-213ENST00000502690 SERPINA10Q9UK55 444 aa21.42■■□□□ 1.02
UBE2D3-213ENST00000502690 HPS5Q9UPZ3 1129 aa21.42■■□□□ 1.02
UBE2D3-213ENST00000502690 PDE4DIPQ5VU43 2346 aa21.41■■□□□ 1.02
UBE2D3-213ENST00000502690 PDE8BO95263 885 aa21.41■■□□□ 1.02
UBE2D3-213ENST00000502690 BCAMP50895 628 aa21.41■■□□□ 1.02
UBE2D3-213ENST00000502690 SLC10A4Q96EP9 437 aa21.41■■□□□ 1.02
UBE2D3-213ENST00000502690 CFHR5Q9BXR6 569 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms