RNA–Protein interactions for RNA: ENST00000498698.1

HMGCL-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-207ENST00000498698 KLHDC4Q8TBB5 520 aa11.89□□□□□ -0.51
HMGCL-207ENST00000498698 API5Q9BZZ5 524 aaKnown RBP11.89□□□□□ -0.51
HMGCL-207ENST00000498698 FAM205AQ6ZU69 1335 aa11.88□□□□□ -0.51
HMGCL-207ENST00000498698 PDE8BO95263 885 aa11.88□□□□□ -0.51
HMGCL-207ENST00000498698 METTL24Q5JXM2 366 aa11.88□□□□□ -0.51
HMGCL-207ENST00000498698 PRAMEF18Q5VWM3 479 aa11.88□□□□□ -0.51
HMGCL-207ENST00000498698 DIEXFQ68CQ4 756 aaKnown RBP11.88□□□□□ -0.51
HMGCL-207ENST00000498698 FBXO33Q7Z6M2 555 aa11.88□□□□□ -0.51
HMGCL-207ENST00000498698 ARHGAP45Q92619 1136 aa11.88□□□□□ -0.51
HMGCL-207ENST00000498698 CCDC102AQ96A19 550 aa11.88□□□□□ -0.51
HMGCL-207ENST00000498698 BEGAINQ9BUH8 593 aa11.88□□□□□ -0.51
HMGCL-207ENST00000498698 JAG2Q9Y219 1238 aa11.88□□□□□ -0.51
HMGCL-207ENST00000498698 MYH3P11055 1940 aa11.88□□□□□ -0.51
HMGCL-207ENST00000498698 CA12O43570 354 aa11.87□□□□□ -0.51
HMGCL-207ENST00000498698 UBTFL1P0CB47 393 aaPredicted RBP11.87□□□□□ -0.51
HMGCL-207ENST00000498698 ZNF157P51786 506 aaPredicted RBP11.87□□□□□ -0.51
HMGCL-207ENST00000498698 PTPN12Q05209 780 aaKnown RBP11.87□□□□□ -0.51
HMGCL-207ENST00000498698 DLGAP5Q15398 846 aa11.87□□□□□ -0.51
HMGCL-207ENST00000498698 MOB2Q70IA6 237 aa11.87□□□□□ -0.51
HMGCL-207ENST00000498698 PCDHAC2Q9Y5I4 1007 aa11.87□□□□□ -0.51
HMGCL-207ENST00000498698 SPDYE2BA6NHP3 402 aa11.86□□□□□ -0.51
HMGCL-207ENST00000498698 F8W031 263 aaPredicted RBP11.86□□□□□ -0.51
HMGCL-207ENST00000498698 EYA2O00167 538 aa11.86□□□□□ -0.51
HMGCL-207ENST00000498698 SLC10A3P09131 477 aa11.86□□□□□ -0.51
HMGCL-207ENST00000498698 SPDYE6P0CI01 402 aa11.86□□□□□ -0.51
HMGCL-207ENST00000498698 FGFR2P21802 821 aa11.86□□□□□ -0.51
HMGCL-207ENST00000498698 CFAP100Q494V2 611 aa11.86□□□□□ -0.51
HMGCL-207ENST00000498698 MFSD14BQ5SR56 506 aa11.86□□□□□ -0.51
HMGCL-207ENST00000498698 INTS3Q68E01 1043 aaKnown RBP11.86□□□□□ -0.51
HMGCL-207ENST00000498698 APOBEC3FQ8IUX4 373 aaKnown RBP11.86□□□□□ -0.51
HMGCL-207ENST00000498698 PRMT6Q96LA8 375 aaPredicted RBP11.86□□□□□ -0.51
HMGCL-207ENST00000498698 KIF16BQ96L93 1317 aa11.86□□□□□ -0.51
HMGCL-207ENST00000498698 UBE2Q2LH0YL09 131 aa11.85□□□□□ -0.51
HMGCL-207ENST00000498698 KIF23Q02241 960 aaPredicted RBP11.85□□□□□ -0.51
HMGCL-207ENST00000498698 ATG9AQ7Z3C6 839 aa11.85□□□□□ -0.51
HMGCL-207ENST00000498698 MEIS3Q99687 375 aa11.85□□□□□ -0.51
HMGCL-207ENST00000498698 TSKSQ9UJT2 592 aa11.85□□□□□ -0.51
HMGCL-207ENST00000498698 THSD7BQ9C0I4 1608 aa11.85□□□□□ -0.51
HMGCL-207ENST00000498698 AOX1Q06278 1338 aa11.85□□□□□ -0.51
HMGCL-207ENST00000498698 BCAMP50895 628 aa11.84□□□□□ -0.51
HMGCL-207ENST00000498698 PUM3Q15397 648 aaKnown RBP11.84□□□□□ -0.51
HMGCL-207ENST00000498698 GRIK5Q16478 980 aa11.84□□□□□ -0.51
HMGCL-207ENST00000498698 CAVIN4Q5BKX8 364 aa11.84□□□□□ -0.51
HMGCL-207ENST00000498698 VPS37DQ86XT2 251 aa11.84□□□□□ -0.51
HMGCL-207ENST00000498698 RASAL3Q86YV0 1011 aa11.84□□□□□ -0.51
HMGCL-207ENST00000498698 DEFB129Q9H1M3 183 aa11.84□□□□□ -0.51
HMGCL-207ENST00000498698 FBXO3Q9UK99 471 aa11.84□□□□□ -0.51
HMGCL-207ENST00000498698 IQSEC3Q9UPP2 1182 aaPredicted RBP11.84□□□□□ -0.51
HMGCL-207ENST00000498698 HDAC5Q9UQL6 1122 aa11.84□□□□□ -0.51
HMGCL-207ENST00000498698 LRRFIP2Q9Y608 721 aaKnown RBP11.84□□□□□ -0.51
HMGCL-207ENST00000498698 TRPM7Q96QT4 1865 aa11.84□□□□□ -0.51
HMGCL-207ENST00000498698 CLRN2A0PK11 232 aa11.83□□□□□ -0.52
HMGCL-207ENST00000498698 IPO8O15397 1037 aaKnown RBP11.83□□□□□ -0.52
HMGCL-207ENST00000498698 BCAR3O75815 825 aa11.83□□□□□ -0.52
HMGCL-207ENST00000498698 CIAO1O76071 339 aa11.83□□□□□ -0.52
HMGCL-207ENST00000498698 IFIT1P09914 478 aaKnown RBP11.83□□□□□ -0.52
HMGCL-207ENST00000498698 TRIM27P14373 513 aa11.83□□□□□ -0.52
HMGCL-207ENST00000498698 NF2P35240 595 aa11.83□□□□□ -0.52
HMGCL-207ENST00000498698 HNRNPUQ00839 825 aaKnown RBP eCLIP11.83□□□□□ -0.52
HMGCL-207ENST00000498698 CSRNP1Q96S65 589 aa11.83□□□□□ -0.52
HMGCL-207ENST00000498698 SERPINA10Q9UK55 444 aa11.83□□□□□ -0.52
HMGCL-207ENST00000498698 TTF2Q9UNY4 1162 aaKnown RBP11.83□□□□□ -0.52
HMGCL-207ENST00000498698 PSME4Q14997 1843 aa11.83□□□□□ -0.52
HMGCL-207ENST00000498698 SPEF2Q9C093 1822 aa11.83□□□□□ -0.52
HMGCL-207ENST00000498698 MYO1BO43795 1136 aa11.82□□□□□ -0.52
HMGCL-207ENST00000498698 CAPN15O75808 1086 aa11.82□□□□□ -0.52
HMGCL-207ENST00000498698 RBM5P52756 815 aaKnown RBP eCLIP11.82□□□□□ -0.52
HMGCL-207ENST00000498698 CHAF1AQ13111 956 aaPredicted RBP11.82□□□□□ -0.52
HMGCL-207ENST00000498698 TTLL12Q14166 644 aaPredicted RBP11.82□□□□□ -0.52
HMGCL-207ENST00000498698 LDLRAD1Q5T700 205 aa11.82□□□□□ -0.52
HMGCL-207ENST00000498698 ATF7IPQ6VMQ6 1270 aa11.82□□□□□ -0.52
HMGCL-207ENST00000498698 TBC1D22AQ8WUA7 517 aa11.82□□□□□ -0.52
HMGCL-207ENST00000498698 LPIN2Q92539 896 aa11.82□□□□□ -0.52
HMGCL-207ENST00000498698 SIL1Q9H173 461 aa11.82□□□□□ -0.52
HMGCL-207ENST00000498698 COPRSQ9NQ92 184 aa11.82□□□□□ -0.52
HMGCL-207ENST00000498698 TNNQ9UQP3 1299 aa11.82□□□□□ -0.52
HMGCL-207ENST00000498698 PPP2R3BQ9Y5P8 575 aa11.82□□□□□ -0.52
HMGCL-207ENST00000498698 ZNF646O15015 1829 aaPredicted RBP11.81□□□□□ -0.52
HMGCL-207ENST00000498698 FRAT2O75474 233 aaPredicted RBP11.81□□□□□ -0.52
HMGCL-207ENST00000498698 GNAI3P08754 354 aa11.81□□□□□ -0.52
HMGCL-207ENST00000498698 SLC5A1P13866 664 aa11.81□□□□□ -0.52
HMGCL-207ENST00000498698 CRKP46108 304 aa11.81□□□□□ -0.52
HMGCL-207ENST00000498698 HDLBPQ00341 1268 aaKnown RBP11.81□□□□□ -0.52
HMGCL-207ENST00000498698 MTX1Q13505 466 aa11.81□□□□□ -0.52
HMGCL-207ENST00000498698 RASA3Q14644 834 aa11.81□□□□□ -0.52
HMGCL-207ENST00000498698 SPDYE2Q495Y8 402 aa11.81□□□□□ -0.52
HMGCL-207ENST00000498698 ARMC9Q7Z3E5 817 aa11.81□□□□□ -0.52
HMGCL-207ENST00000498698 REM2Q8IYK8 340 aaPredicted RBP11.81□□□□□ -0.52
HMGCL-207ENST00000498698 DZIP1LQ8IYY4 767 aaKnown RBP11.81□□□□□ -0.52
HMGCL-207ENST00000498698 FRAT1Q92837 279 aaPredicted RBP11.81□□□□□ -0.52
HMGCL-207ENST00000498698 VEZTQ9HBM0 779 aa11.81□□□□□ -0.52
HMGCL-207ENST00000498698 RNF186Q9NXI6 227 aa11.81□□□□□ -0.52
HMGCL-207ENST00000498698 SAGE1Q9NXZ1 904 aa11.81□□□□□ -0.52
HMGCL-207ENST00000498698 CEP126Q9P2H0 1117 aa11.81□□□□□ -0.52
HMGCL-207ENST00000498698 ZNF70Q9UC06 446 aaPredicted RBP11.81□□□□□ -0.52
HMGCL-207ENST00000498698 PA2G4Q9UQ80 394 aaKnown RBP11.81□□□□□ -0.52
HMGCL-207ENST00000498698 IL15P40933 162 aaPredicted RBP11.8□□□□□ -0.52
HMGCL-207ENST00000498698 PRKG1Q13976 671 aa11.8□□□□□ -0.52
HMGCL-207ENST00000498698 MAP3K11Q16584 847 aa11.8□□□□□ -0.52
HMGCL-207ENST00000498698 ATP2B3Q16720 1220 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms