RNA–Protein interactions for RNA: ENST00000498645.1

LSAMP-206, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-206ENST00000498645 CERS5Q8N5B7 392 aa13.95□□□□□ -0.18
LSAMP-206ENST00000498645 SUCLG2Q96I99 432 aa13.95□□□□□ -0.18
LSAMP-206ENST00000498645 NBPF7P0C2Y1 421 aaPredicted RBP13.94□□□□□ -0.18
LSAMP-206ENST00000498645 MMP14P50281 582 aa13.94□□□□□ -0.18
LSAMP-206ENST00000498645 C15orf52Q6ZUT6 534 aaKnown RBP13.94□□□□□ -0.18
LSAMP-206ENST00000498645 PCDHAC2Q9Y5I4 1007 aa13.94□□□□□ -0.18
LSAMP-206ENST00000498645 ZNF521Q96K83 1311 aa13.93□□□□□ -0.18
LSAMP-206ENST00000498645 IL1R1P14778 569 aa13.93□□□□□ -0.18
LSAMP-206ENST00000498645 RBM5P52756 815 aaKnown RBP eCLIP13.93□□□□□ -0.18
LSAMP-206ENST00000498645 CLRN2A0PK11 232 aa13.92□□□□□ -0.18
LSAMP-206ENST00000498645 GYG1P46976 350 aa13.92□□□□□ -0.18
LSAMP-206ENST00000498645 CFAP100Q494V2 611 aa13.92□□□□□ -0.18
LSAMP-206ENST00000498645 ARMC9Q7Z3E5 817 aa13.92□□□□□ -0.18
LSAMP-206ENST00000498645 REM2Q8IYK8 340 aaPredicted RBP13.92□□□□□ -0.18
LSAMP-206ENST00000498645 ZBED3Q96IU2 234 aaPredicted RBP13.92□□□□□ -0.18
LSAMP-206ENST00000498645 PUS3Q9BZE2 481 aaKnown RBP13.92□□□□□ -0.18
LSAMP-206ENST00000498645 VEZTQ9HBM0 779 aa13.92□□□□□ -0.18
LSAMP-206ENST00000498645 ANGEL1Q9UNK9 670 aaKnown RBP13.92□□□□□ -0.18
LSAMP-206ENST00000498645 FZD1Q9UP38 647 aa13.92□□□□□ -0.18
LSAMP-206ENST00000498645 ARAP2Q8WZ64 1704 aa13.92□□□□□ -0.18
LSAMP-206ENST00000498645 MYO1BO43795 1136 aa13.91□□□□□ -0.18
LSAMP-206ENST00000498645 PTPN12Q05209 780 aaKnown RBP13.91□□□□□ -0.18
LSAMP-206ENST00000498645 MRPL50Q8N5N7 158 aaKnown RBP13.91□□□□□ -0.18
LSAMP-206ENST00000498645 KAZALD1Q96I82 304 aa13.91□□□□□ -0.18
LSAMP-206ENST00000498645 DEFB129Q9H1M3 183 aa13.91□□□□□ -0.18
LSAMP-206ENST00000498645 BICC1Q9H694 974 aaKnown RBP13.91□□□□□ -0.18
LSAMP-206ENST00000498645 COL1A1P02452 1464 aaPredicted RBP13.91□□□□□ -0.18
LSAMP-206ENST00000498645 SPDYE2BA6NHP3 402 aa13.9□□□□□ -0.18
LSAMP-206ENST00000498645 E9PSI1 815 aa13.9□□□□□ -0.18
LSAMP-206ENST00000498645 SPDYE6P0CI01 402 aa13.9□□□□□ -0.18
LSAMP-206ENST00000498645 HIBADHP31937 336 aaKnown RBP13.9□□□□□ -0.18
LSAMP-206ENST00000498645 PTPRCP08575 1304 aa13.9□□□□□ -0.19
LSAMP-206ENST00000498645 AOX1Q06278 1338 aa13.9□□□□□ -0.19
LSAMP-206ENST00000498645 TBC1D8O95759 1140 aa13.89□□□□□ -0.19
LSAMP-206ENST00000498645 FKBP1AP62942 108 aaKnown RBP13.89□□□□□ -0.19
LSAMP-206ENST00000498645 UBE4AQ14139 1066 aa13.89□□□□□ -0.19
LSAMP-206ENST00000498645 METTL24Q5JXM2 366 aa13.89□□□□□ -0.19
LSAMP-206ENST00000498645 MFSD14BQ5SR56 506 aa13.89□□□□□ -0.19
LSAMP-206ENST00000498645 VPS37DQ86XT2 251 aa13.89□□□□□ -0.19
LSAMP-206ENST00000498645 MTMR14Q8NCE2 650 aa13.89□□□□□ -0.19
LSAMP-206ENST00000498645 SSH1Q8WYL5 1049 aa13.89□□□□□ -0.19
LSAMP-206ENST00000498645 PRMT6Q96LA8 375 aaPredicted RBP13.89□□□□□ -0.19
LSAMP-206ENST00000498645 IQSEC3Q9UPP2 1182 aaPredicted RBP13.89□□□□□ -0.19
LSAMP-206ENST00000498645 UTYO14607 1347 aa13.89□□□□□ -0.19
LSAMP-206ENST00000498645 MROH5Q6ZUA9 1318 aa13.89□□□□□ -0.19
LSAMP-206ENST00000498645 SSC5DA1L4H1 1573 aa13.88□□□□□ -0.19
LSAMP-206ENST00000498645 FRAT2O75474 233 aaPredicted RBP13.88□□□□□ -0.19
LSAMP-206ENST00000498645 MLLT1Q03111 559 aaPredicted RBP13.88□□□□□ -0.19
LSAMP-206ENST00000498645 SREBF2Q12772 1141 aa13.88□□□□□ -0.19
LSAMP-206ENST00000498645 LRRC24Q50LG9 513 aa13.88□□□□□ -0.19
LSAMP-206ENST00000498645 ANKRD44Q8N8A2 993 aa13.88□□□□□ -0.19
LSAMP-206ENST00000498645 TDRD7Q8NHU6 1098 aaKnown RBP13.88□□□□□ -0.19
LSAMP-206ENST00000498645 KLHDC4Q8TBB5 520 aa13.88□□□□□ -0.19
LSAMP-206ENST00000498645 FAM84BQ96KN1 310 aaPredicted RBP13.88□□□□□ -0.19
LSAMP-206ENST00000498645 TTF2Q9UNY4 1162 aaKnown RBP13.88□□□□□ -0.19
LSAMP-206ENST00000498645 FAM205AQ6ZU69 1335 aa13.88□□□□□ -0.19
LSAMP-206ENST00000498645 PPP1R12BO60237 982 aaPredicted RBP13.87□□□□□ -0.19
LSAMP-206ENST00000498645 CHAF1AQ13111 956 aaPredicted RBP13.87□□□□□ -0.19
LSAMP-206ENST00000498645 RABL6Q3YEC7 729 aaPredicted RBP13.87□□□□□ -0.19
LSAMP-206ENST00000498645 CTU1Q7Z7A3 348 aaKnown RBP13.87□□□□□ -0.19
LSAMP-206ENST00000498645 CDCA7LQ96GN5 454 aa13.87□□□□□ -0.19
LSAMP-206ENST00000498645 SMC4Q9NTJ3 1288 aa13.87□□□□□ -0.19
LSAMP-206ENST00000498645 RIPOR2Q9Y4F9 1068 aa13.87□□□□□ -0.19
LSAMP-206ENST00000498645 PPP2R3BQ9Y5P8 575 aa13.87□□□□□ -0.19
LSAMP-206ENST00000498645 MYH13Q9UKX3 1938 aa13.87□□□□□ -0.19
LSAMP-206ENST00000498645 OTOFQ9HC10 1997 aa13.87□□□□□ -0.19
LSAMP-206ENST00000498645 SLFN5Q08AF3 891 aa13.86□□□□□ -0.19
LSAMP-206ENST00000498645 LDLRAD1Q5T700 205 aa13.86□□□□□ -0.19
LSAMP-206ENST00000498645 NBPF12Q5TAG4 269 aaPredicted RBP13.86□□□□□ -0.19
LSAMP-206ENST00000498645 SPRYD7Q5W111 196 aa13.86□□□□□ -0.19
LSAMP-206ENST00000498645 ZNF296Q8WUU4 475 aaPredicted RBP13.86□□□□□ -0.19
LSAMP-206ENST00000498645 SLC10A4Q96EP9 437 aa13.86□□□□□ -0.19
LSAMP-206ENST00000498645 CLMNQ96JQ2 1002 aa13.86□□□□□ -0.19
LSAMP-206ENST00000498645 TDRD3Q9H7E2 651 aaKnown RBP13.86□□□□□ -0.19
LSAMP-206ENST00000498645 TM4SF4P48230 202 aa13.85□□□□□ -0.19
LSAMP-206ENST00000498645 SOX10P56693 466 aa13.85□□□□□ -0.19
LSAMP-206ENST00000498645 RASA3Q14644 834 aa13.85□□□□□ -0.19
LSAMP-206ENST00000498645 SUPT20HL1Q3ZLR7 823 aa13.85□□□□□ -0.19
LSAMP-206ENST00000498645 CAVIN4Q5BKX8 364 aa13.85□□□□□ -0.19
LSAMP-206ENST00000498645 USP44Q9H0E7 712 aa13.85□□□□□ -0.19
LSAMP-206ENST00000498645 ZNF70Q9UC06 446 aaPredicted RBP13.85□□□□□ -0.19
LSAMP-206ENST00000498645 TNRC18O15417 2968 aaPredicted RBP13.84□□□□□ -0.19
LSAMP-206ENST00000498645 TCP10L2B9ZVM9 353 aa13.84□□□□□ -0.19
LSAMP-206ENST00000498645 PDE8BO95263 885 aa13.84□□□□□ -0.19
LSAMP-206ENST00000498645 CRKP46108 304 aa13.84□□□□□ -0.19
LSAMP-206ENST00000498645 IREB2P48200 963 aaKnown RBP13.84□□□□□ -0.19
LSAMP-206ENST00000498645 TNFAIP1Q13829 316 aa13.84□□□□□ -0.19
LSAMP-206ENST00000498645 SPDYE2Q495Y8 402 aa13.84□□□□□ -0.19
LSAMP-206ENST00000498645 WNK4Q96J92 1243 aa13.84□□□□□ -0.19
LSAMP-206ENST00000498645 SERPINA10Q9UK55 444 aa13.84□□□□□ -0.19
LSAMP-206ENST00000498645 GPR25O00155 361 aa13.83□□□□□ -0.2
LSAMP-206ENST00000498645 RGS19P49795 217 aa13.83□□□□□ -0.2
LSAMP-206ENST00000498645 BCAMP50895 628 aa13.83□□□□□ -0.2
LSAMP-206ENST00000498645 GRIK5Q16478 980 aa13.83□□□□□ -0.2
LSAMP-206ENST00000498645 MAP3K11Q16584 847 aa13.83□□□□□ -0.2
LSAMP-206ENST00000498645 ALDH1L2Q3SY69 923 aa13.83□□□□□ -0.2
LSAMP-206ENST00000498645 FBXO33Q7Z6M2 555 aa13.83□□□□□ -0.2
LSAMP-206ENST00000498645 DZIP1LQ8IYY4 767 aaKnown RBP13.83□□□□□ -0.2
LSAMP-206ENST00000498645 LAMB1P07942 1786 aa13.82□□□□□ -0.2
LSAMP-206ENST00000498645 MANSC4A6NHS7 340 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms