RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 MEIS3Q99687 375 aa20.19■□□□□ 0.82
NR1H3-227ENST00000498548 IQSEC3Q9UPP2 1182 aaPredicted RBP20.18■□□□□ 0.82
NR1H3-227ENST00000498548 LRRFIP2Q9Y608 721 aaKnown RBP20.18■□□□□ 0.82
NR1H3-227ENST00000498548 PDE8BO95263 885 aa20.17■□□□□ 0.82
NR1H3-227ENST00000498548 PTPN12Q05209 780 aaKnown RBP20.17■□□□□ 0.82
NR1H3-227ENST00000498548 VGLL2Q8N8G2 317 aa20.17■□□□□ 0.82
NR1H3-227ENST00000498548 TDRD7Q8NHU6 1098 aaKnown RBP20.17■□□□□ 0.82
NR1H3-227ENST00000498548 KIF16BQ96L93 1317 aa20.17■□□□□ 0.82
NR1H3-227ENST00000498548 MAP2K1Q02750 393 aaPredicted RBP20.16■□□□□ 0.82
NR1H3-227ENST00000498548 ARHGAP45Q92619 1136 aa20.16■□□□□ 0.82
NR1H3-227ENST00000498548 HHIPL1Q96JK4 782 aa20.16■□□□□ 0.82
NR1H3-227ENST00000498548 ZIC5Q96T25 663 aa20.16■□□□□ 0.82
NR1H3-227ENST00000498548 SIL1Q9H173 461 aa20.16■□□□□ 0.82
NR1H3-227ENST00000498548 PITPNM2Q9BZ72 1349 aa20.16■□□□□ 0.82
NR1H3-227ENST00000498548 EYA2O00167 538 aa20.15■□□□□ 0.82
NR1H3-227ENST00000498548 DLGAP5Q15398 846 aa20.15■□□□□ 0.82
NR1H3-227ENST00000498548 INTS3Q68E01 1043 aaKnown RBP20.15■□□□□ 0.82
NR1H3-227ENST00000498548 MOB2Q70IA6 237 aa20.15■□□□□ 0.82
NR1H3-227ENST00000498548 FBXO33Q7Z6M2 555 aa20.15■□□□□ 0.82
NR1H3-227ENST00000498548 CLUAP1Q96AJ1 413 aa20.15■□□□□ 0.82
NR1H3-227ENST00000498548 ZBED3Q96IU2 234 aaPredicted RBP20.15■□□□□ 0.82
NR1H3-227ENST00000498548 FAM205AQ6ZU69 1335 aa20.14■□□□□ 0.81
NR1H3-227ENST00000498548 TRIM27P14373 513 aa20.14■□□□□ 0.81
NR1H3-227ENST00000498548 CTCFP49711 727 aaPredicted RBP20.14■□□□□ 0.81
NR1H3-227ENST00000498548 BCAMP50895 628 aa20.14■□□□□ 0.81
NR1H3-227ENST00000498548 LBX1P52954 281 aa20.14■□□□□ 0.81
NR1H3-227ENST00000498548 CHAF1AQ13111 956 aaPredicted RBP20.14■□□□□ 0.81
NR1H3-227ENST00000498548 CFAP100Q494V2 611 aa20.14■□□□□ 0.81
NR1H3-227ENST00000498548 RGMBQ6NW40 437 aa20.14■□□□□ 0.81
NR1H3-227ENST00000498548 ATG9AQ7Z3C6 839 aa20.14■□□□□ 0.81
NR1H3-227ENST00000498548 VPS37DQ86XT2 251 aa20.14■□□□□ 0.81
NR1H3-227ENST00000498548 PA2G4Q9UQ80 394 aaKnown RBP20.14■□□□□ 0.81
NR1H3-227ENST00000498548 THSD7BQ9C0I4 1608 aa20.13■□□□□ 0.81
NR1H3-227ENST00000498548 AOX1Q06278 1338 aa20.13■□□□□ 0.81
NR1H3-227ENST00000498548 IPO8O15397 1037 aaKnown RBP20.13■□□□□ 0.81
NR1H3-227ENST00000498548 MAP2K2P36507 400 aa20.13■□□□□ 0.81
NR1H3-227ENST00000498548 MMP14P50281 582 aa20.13■□□□□ 0.81
NR1H3-227ENST00000498548 FKBP1AP62942 108 aaKnown RBP20.13■□□□□ 0.81
NR1H3-227ENST00000498548 HSPA8P11142 646 aaKnown RBP20.12■□□□□ 0.81
NR1H3-227ENST00000498548 FGFR2P21802 821 aa20.12■□□□□ 0.81
NR1H3-227ENST00000498548 ZNF157P51786 506 aaPredicted RBP20.12■□□□□ 0.81
NR1H3-227ENST00000498548 RBM5P52756 815 aaKnown RBP eCLIP20.12■□□□□ 0.81
NR1H3-227ENST00000498548 GRIK5Q16478 980 aa20.12■□□□□ 0.81
NR1H3-227ENST00000498548 CAVIN4Q5BKX8 364 aa20.12■□□□□ 0.81
NR1H3-227ENST00000498548 MFSD14BQ5SR56 506 aa20.12■□□□□ 0.81
NR1H3-227ENST00000498548 ATF7IPQ6VMQ6 1270 aa20.12■□□□□ 0.81
NR1H3-227ENST00000498548 TNS4Q8IZW8 715 aa20.12■□□□□ 0.81
NR1H3-227ENST00000498548 PRMT6Q96LA8 375 aaPredicted RBP20.12■□□□□ 0.81
NR1H3-227ENST00000498548 TSKSQ9UJT2 592 aa20.12■□□□□ 0.81
NR1H3-227ENST00000498548 CLRN2A0PK11 232 aa20.11■□□□□ 0.81
NR1H3-227ENST00000498548 FAM155AB1AL88 458 aaPredicted RBP20.11■□□□□ 0.81
NR1H3-227ENST00000498548 UBE2Q2LH0YL09 131 aa20.11■□□□□ 0.81
NR1H3-227ENST00000498548 FRAT2O75474 233 aaPredicted RBP20.11■□□□□ 0.81
NR1H3-227ENST00000498548 PRKG1Q13976 671 aa20.11■□□□□ 0.81
NR1H3-227ENST00000498548 PUM3Q15397 648 aaKnown RBP20.11■□□□□ 0.81
NR1H3-227ENST00000498548 TTF2Q9UNY4 1162 aaKnown RBP20.11■□□□□ 0.81
NR1H3-227ENST00000498548 IFIT1P09914 478 aaKnown RBP20.1■□□□□ 0.81
NR1H3-227ENST00000498548 TTLL12Q14166 644 aaPredicted RBP20.1■□□□□ 0.81
NR1H3-227ENST00000498548 APOBEC3FQ8IUX4 373 aaKnown RBP20.1■□□□□ 0.81
NR1H3-227ENST00000498548 MTMR14Q8NCE2 650 aa20.1■□□□□ 0.81
NR1H3-227ENST00000498548 BEGAINQ9BUH8 593 aa20.1■□□□□ 0.81
NR1H3-227ENST00000498548 ECM29Q5VYK3 1845 aa20.09■□□□□ 0.81
NR1H3-227ENST00000498548 GNAI3P08754 354 aa20.09■□□□□ 0.81
NR1H3-227ENST00000498548 TMEM57Q8N5G2 664 aa20.09■□□□□ 0.81
NR1H3-227ENST00000498548 FZD1Q9UP38 647 aa20.09■□□□□ 0.81
NR1H3-227ENST00000498548 HDAC5Q9UQL6 1122 aa20.09■□□□□ 0.81
NR1H3-227ENST00000498548 SPDYE2BA6NHP3 402 aa20.08■□□□□ 0.81
NR1H3-227ENST00000498548 SPDYE6P0CI01 402 aa20.08■□□□□ 0.81
NR1H3-227ENST00000498548 SLC5A1P13866 664 aa20.08■□□□□ 0.81
NR1H3-227ENST00000498548 KIF23Q02241 960 aaPredicted RBP20.08■□□□□ 0.81
NR1H3-227ENST00000498548 NOGQ13253 232 aa20.08■□□□□ 0.81
NR1H3-227ENST00000498548 ZKSCAN2Q63HK3 967 aa20.08■□□□□ 0.81
NR1H3-227ENST00000498548 VEZTQ9HBM0 779 aa20.08■□□□□ 0.81
NR1H3-227ENST00000498548 PRDM10Q9NQV6 1147 aa20.08■□□□□ 0.81
NR1H3-227ENST00000498548 CEP126Q9P2H0 1117 aa20.08■□□□□ 0.81
NR1H3-227ENST00000498548 CIAO1O76071 339 aa20.07■□□□□ 0.8
NR1H3-227ENST00000498548 LPIN2Q92539 896 aa20.07■□□□□ 0.8
NR1H3-227ENST00000498548 CCDC102AQ96A19 550 aa20.07■□□□□ 0.8
NR1H3-227ENST00000498548 DEFB129Q9H1M3 183 aa20.07■□□□□ 0.8
NR1H3-227ENST00000498548 PAPPA2Q9BXP8 1791 aa20.07■□□□□ 0.8
NR1H3-227ENST00000498548 ZBED9Q6R2W3 1325 aa20.06■□□□□ 0.8
NR1H3-227ENST00000498548 SRGAP3O43295 1099 aa20.06■□□□□ 0.8
NR1H3-227ENST00000498548 CAPN15O75808 1086 aa20.06■□□□□ 0.8
NR1H3-227ENST00000498548 SLC10A3P09131 477 aa20.06■□□□□ 0.8
NR1H3-227ENST00000498548 NF2P35240 595 aa20.06■□□□□ 0.8
NR1H3-227ENST00000498548 ATP2B3Q16720 1220 aa20.06■□□□□ 0.8
NR1H3-227ENST00000498548 RASAL3Q86YV0 1011 aa20.06■□□□□ 0.8
NR1H3-227ENST00000498548 TDRD3Q9H7E2 651 aaKnown RBP20.06■□□□□ 0.8
NR1H3-227ENST00000498548 COPRSQ9NQ92 184 aa20.06■□□□□ 0.8
NR1H3-227ENST00000498548 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.06■□□□□ 0.8
NR1H3-227ENST00000498548 ARAP2Q8WZ64 1704 aa20.05■□□□□ 0.8
NR1H3-227ENST00000498548 MYO1BO43795 1136 aa20.05■□□□□ 0.8
NR1H3-227ENST00000498548 IL15P40933 162 aaPredicted RBP20.05■□□□□ 0.8
NR1H3-227ENST00000498548 CRKP46108 304 aa20.05■□□□□ 0.8
NR1H3-227ENST00000498548 FKBP1BP68106 108 aa20.05■□□□□ 0.8
NR1H3-227ENST00000498548 FBXO3Q9UK99 471 aa20.05■□□□□ 0.8
NR1H3-227ENST00000498548 MYH13Q9UKX3 1938 aa20.05■□□□□ 0.8
NR1H3-227ENST00000498548 GNAI2P04899 355 aa20.04■□□□□ 0.8
NR1H3-227ENST00000498548 ZNF70Q9UC06 446 aaPredicted RBP20.04■□□□□ 0.8
NR1H3-227ENST00000498548 SERPINA10Q9UK55 444 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms