RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 ECM29Q5VYK3 1845 aa23.49■■□□□ 1.35
PRKCB-209ENST00000498058 F8W031 263 aaPredicted RBP23.49■■□□□ 1.35
PRKCB-209ENST00000498058 NBPF7P0C2Y1 421 aaPredicted RBP23.49■■□□□ 1.35
PRKCB-209ENST00000498058 PTPN12Q05209 780 aaKnown RBP23.49■■□□□ 1.35
PRKCB-209ENST00000498058 TTLL12Q14166 644 aaPredicted RBP23.49■■□□□ 1.35
PRKCB-209ENST00000498058 CCDC57Q2TAC2 916 aa23.49■■□□□ 1.35
PRKCB-209ENST00000498058 SRCIN1Q9C0H9 1055 aa23.49■■□□□ 1.35
PRKCB-209ENST00000498058 C9orf78Q9NZ63 289 aaPredicted RBP23.49■■□□□ 1.35
PRKCB-209ENST00000498058 MKRN3Q13064 507 aaKnown RBP23.48■■□□□ 1.35
PRKCB-209ENST00000498058 APOBEC3FQ8IUX4 373 aaKnown RBP23.48■■□□□ 1.35
PRKCB-209ENST00000498058 CNNM1Q9NRU3 951 aa23.48■■□□□ 1.35
PRKCB-209ENST00000498058 DLGAP5Q15398 846 aa23.47■■□□□ 1.35
PRKCB-209ENST00000498058 ZNF804AQ7Z570 1209 aa23.47■■□□□ 1.35
PRKCB-209ENST00000498058 MRPL50Q8N5N7 158 aaKnown RBP23.47■■□□□ 1.35
PRKCB-209ENST00000498058 MTMR14Q8NCE2 650 aa23.47■■□□□ 1.35
PRKCB-209ENST00000498058 SSC5DA1L4H1 1573 aa23.47■■□□□ 1.35
PRKCB-209ENST00000498058 TAF7LQ5H9L4 462 aa23.46■■□□□ 1.35
PRKCB-209ENST00000498058 REM2Q8IYK8 340 aaPredicted RBP23.46■■□□□ 1.35
PRKCB-209ENST00000498058 PRMT6Q96LA8 375 aaPredicted RBP23.46■■□□□ 1.35
PRKCB-209ENST00000498058 UTYO14607 1347 aa23.45■■□□□ 1.34
PRKCB-209ENST00000498058 CFAP100Q494V2 611 aa23.45■■□□□ 1.34
PRKCB-209ENST00000498058 LDLRAD1Q5T700 205 aa23.45■■□□□ 1.34
PRKCB-209ENST00000498058 DEFB129Q9H1M3 183 aa23.45■■□□□ 1.34
PRKCB-209ENST00000498058 CLRN2A0PK11 232 aa23.44■■□□□ 1.34
PRKCB-209ENST00000498058 TBC1D8O95759 1140 aa23.44■■□□□ 1.34
PRKCB-209ENST00000498058 NF2P35240 595 aa23.44■■□□□ 1.34
PRKCB-209ENST00000498058 GYG1P46976 350 aa23.44■■□□□ 1.34
PRKCB-209ENST00000498058 TM4SF4P48230 202 aa23.44■■□□□ 1.34
PRKCB-209ENST00000498058 FKBP1AP62942 108 aaKnown RBP23.44■■□□□ 1.34
PRKCB-209ENST00000498058 RIPOR2Q9Y4F9 1068 aa23.44■■□□□ 1.34
PRKCB-209ENST00000498058 SPDYE2BA6NHP3 402 aa23.43■■□□□ 1.34
PRKCB-209ENST00000498058 SPDYE6P0CI01 402 aa23.43■■□□□ 1.34
PRKCB-209ENST00000498058 ARMC9Q7Z3E5 817 aa23.43■■□□□ 1.34
PRKCB-209ENST00000498058 ANKRD44Q8N8A2 993 aa23.43■■□□□ 1.34
PRKCB-209ENST00000498058 TDRD7Q8NHU6 1098 aaKnown RBP23.43■■□□□ 1.34
PRKCB-209ENST00000498058 FAM84BQ96KN1 310 aaPredicted RBP23.43■■□□□ 1.34
PRKCB-209ENST00000498058 BICC1Q9H694 974 aaKnown RBP23.43■■□□□ 1.34
PRKCB-209ENST00000498058 ANGEL1Q9UNK9 670 aaKnown RBP23.43■■□□□ 1.34
PRKCB-209ENST00000498058 COL1A1P02452 1464 aaPredicted RBP23.43■■□□□ 1.34
PRKCB-209ENST00000498058 FAM205AQ6ZU69 1335 aa23.42■■□□□ 1.34
PRKCB-209ENST00000498058 MLLT1Q03111 559 aaPredicted RBP23.42■■□□□ 1.34
PRKCB-209ENST00000498058 UBE4AQ14139 1066 aa23.42■■□□□ 1.34
PRKCB-209ENST00000498058 R3HDMLQ9H3Y0 253 aa23.42■■□□□ 1.34
PRKCB-209ENST00000498058 RABL6Q3YEC7 729 aaPredicted RBP23.41■■□□□ 1.34
PRKCB-209ENST00000498058 LRRC24Q50LG9 513 aa23.41■■□□□ 1.34
PRKCB-209ENST00000498058 CCER2I3L3R5 266 aa23.4■■□□□ 1.34
PRKCB-209ENST00000498058 GRIK5Q16478 980 aa23.4■■□□□ 1.34
PRKCB-209ENST00000498058 MAP3K11Q16584 847 aa23.4■■□□□ 1.34
PRKCB-209ENST00000498058 SPRYD7Q5W111 196 aa23.4■■□□□ 1.34
PRKCB-209ENST00000498058 CTU1Q7Z7A3 348 aaKnown RBP23.4■■□□□ 1.34
PRKCB-209ENST00000498058 MIER1Q8N108 512 aa23.4■■□□□ 1.34
PRKCB-209ENST00000498058 ZNF296Q8WUU4 475 aaPredicted RBP23.4■■□□□ 1.34
PRKCB-209ENST00000498058 SSH1Q8WYL5 1049 aa23.4■■□□□ 1.34
PRKCB-209ENST00000498058 CLMNQ96JQ2 1002 aa23.4■■□□□ 1.34
PRKCB-209ENST00000498058 ARAP2Q8WZ64 1704 aa23.39■■□□□ 1.34
PRKCB-209ENST00000498058 HIBADHP31937 336 aaKnown RBP23.39■■□□□ 1.33
PRKCB-209ENST00000498058 NBPF12Q5TAG4 269 aaPredicted RBP23.39■■□□□ 1.33
PRKCB-209ENST00000498058 MFSD14BQ5SR56 506 aa23.38■■□□□ 1.33
PRKCB-209ENST00000498058 KLHDC4Q8TBB5 520 aa23.38■■□□□ 1.33
PRKCB-209ENST00000498058 VEZTQ9HBM0 779 aa23.38■■□□□ 1.33
PRKCB-209ENST00000498058 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.38■■□□□ 1.33
PRKCB-209ENST00000498058 SLFN5Q08AF3 891 aa23.37■■□□□ 1.33
PRKCB-209ENST00000498058 FBXO33Q7Z6M2 555 aa23.37■■□□□ 1.33
PRKCB-209ENST00000498058 VGLL2Q8N8G2 317 aa23.37■■□□□ 1.33
PRKCB-209ENST00000498058 CDCA7LQ96GN5 454 aa23.37■■□□□ 1.33
PRKCB-209ENST00000498058 USP44Q9H0E7 712 aa23.37■■□□□ 1.33
PRKCB-209ENST00000498058 IQSEC3Q9UPP2 1182 aaPredicted RBP23.37■■□□□ 1.33
PRKCB-209ENST00000498058 TNRC18O15417 2968 aaPredicted RBP23.37■■□□□ 1.33
PRKCB-209ENST00000498058 GPR25O00155 361 aa23.36■■□□□ 1.33
PRKCB-209ENST00000498058 RBM5P52756 815 aaKnown RBP eCLIP23.36■■□□□ 1.33
PRKCB-209ENST00000498058 RASA3Q14644 834 aa23.36■■□□□ 1.33
PRKCB-209ENST00000498058 CDAN1Q8IWY9 1227 aa23.36■■□□□ 1.33
PRKCB-209ENST00000498058 TTF2Q9UNY4 1162 aaKnown RBP23.36■■□□□ 1.33
PRKCB-209ENST00000498058 PPP2R3BQ9Y5P8 575 aa23.36■■□□□ 1.33
PRKCB-209ENST00000498058 LAMB1P07942 1786 aa23.36■■□□□ 1.33
PRKCB-209ENST00000498058 MROH5Q6ZUA9 1318 aa23.35■■□□□ 1.33
PRKCB-209ENST00000498058 USP2O75604 605 aaPredicted RBP23.35■■□□□ 1.33
PRKCB-209ENST00000498058 SOX10P56693 466 aa23.35■■□□□ 1.33
PRKCB-209ENST00000498058 TDRD3Q9H7E2 651 aaKnown RBP23.35■■□□□ 1.33
PRKCB-209ENST00000498058 ZNF70Q9UC06 446 aaPredicted RBP23.35■■□□□ 1.33
PRKCB-209ENST00000498058 PTPRCP08575 1304 aa23.34■■□□□ 1.33
PRKCB-209ENST00000498058 OTOFQ9HC10 1997 aa23.34■■□□□ 1.33
PRKCB-209ENST00000498058 E9PSI1 815 aa23.34■■□□□ 1.33
PRKCB-209ENST00000498058 MYO1BO43795 1136 aa23.34■■□□□ 1.33
PRKCB-209ENST00000498058 GJA5P36382 358 aa23.34■■□□□ 1.33
PRKCB-209ENST00000498058 SREBF2Q12772 1141 aa23.34■■□□□ 1.33
PRKCB-209ENST00000498058 SPDYE2Q495Y8 402 aa23.34■■□□□ 1.33
PRKCB-209ENST00000498058 SLC10A4Q96EP9 437 aa23.34■■□□□ 1.33
PRKCB-209ENST00000498058 WNK4Q96J92 1243 aa23.34■■□□□ 1.33
PRKCB-209ENST00000498058 CFHR5Q9BXR6 569 aa23.33■■□□□ 1.33
PRKCB-209ENST00000498058 HPS5Q9UPZ3 1129 aa23.33■■□□□ 1.33
PRKCB-209ENST00000498058 PPP1R12BO60237 982 aaPredicted RBP23.32■■□□□ 1.32
PRKCB-209ENST00000498058 RFX5P48382 616 aaPredicted RBP23.32■■□□□ 1.32
PRKCB-209ENST00000498058 NOM1Q5C9Z4 860 aaKnown RBP23.32■■□□□ 1.32
PRKCB-209ENST00000498058 METTL24Q5JXM2 366 aa23.32■■□□□ 1.32
PRKCB-209ENST00000498058 DZIP1LQ8IYY4 767 aaKnown RBP23.32■■□□□ 1.32
PRKCB-209ENST00000498058 TEPSINQ96N21 525 aa23.32■■□□□ 1.32
PRKCB-209ENST00000498058 SERPINA10Q9UK55 444 aa23.32■■□□□ 1.32
PRKCB-209ENST00000498058 IGF2BP3O00425 579 aaKnown RBP eCLIP23.31■■□□□ 1.32
PRKCB-209ENST00000498058 PDE8BO95263 885 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms