RNA–Protein interactions for RNA: ENST00000497816.1

IVD-209, Transcript of isovaleryl-CoA dehydrogenase, human

TSL 1 (best)

Gene IVD, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IVD-209	ENST00000497816	SASH1	O94885	1247 aa		18.29	■□□□□ 0.52
IVD-209	ENST00000497816	PDE8B	O95263	885 aa		18.29	■□□□□ 0.52
IVD-209	ENST00000497816	MEIS3	Q99687	375 aa		18.29	■□□□□ 0.52
IVD-209	ENST00000497816	HDAC9	Q9UKV0	1011 aa		18.29	■□□□□ 0.52
IVD-209	ENST00000497816	TRIM27	P14373	513 aa		18.28	■□□□□ 0.52
IVD-209	ENST00000497816	HIBADH	P31937	336 aa	Known RBP	18.28	■□□□□ 0.52
IVD-209	ENST00000497816	HUNK	P57058	714 aa		18.28	■□□□□ 0.52
IVD-209	ENST00000497816	PTPN12	Q05209	780 aa	Known RBP	18.28	■□□□□ 0.52
IVD-209	ENST00000497816	GRM1	Q13255	1194 aa		18.28	■□□□□ 0.52
IVD-209	ENST00000497816	SCAF8	Q9UPN6	1271 aa	Known RBP	18.28	■□□□□ 0.52
IVD-209	ENST00000497816	JAG2	Q9Y219	1238 aa		18.28	■□□□□ 0.52
IVD-209	ENST00000497816	LRRFIP2	Q9Y608	721 aa	Known RBP	18.28	■□□□□ 0.52
IVD-209	ENST00000497816	AOC2	O75106	756 aa		18.28	■□□□□ 0.52
IVD-209	ENST00000497816	IFFO2	Q5TF58	517 aa		18.28	■□□□□ 0.52
IVD-209	ENST00000497816	FBXO33	Q7Z6M2	555 aa		18.28	■□□□□ 0.52
IVD-209	ENST00000497816	C2orf69	Q8N8R5	385 aa		18.28	■□□□□ 0.52
IVD-209	ENST00000497816	EYA2	O00167	538 aa		18.27	■□□□□ 0.51
IVD-209	ENST00000497816	MAP2K1	Q02750	393 aa	Predicted RBP	18.27	■□□□□ 0.51
IVD-209	ENST00000497816	TNN	Q9UQP3	1299 aa		18.27	■□□□□ 0.51
IVD-209	ENST00000497816	ZBED9	Q6R2W3	1325 aa		18.26	■□□□□ 0.51
IVD-209	ENST00000497816	IPO8	O15397	1037 aa	Known RBP	18.26	■□□□□ 0.51
IVD-209	ENST00000497816	FGFR2	P21802	821 aa		18.26	■□□□□ 0.51
IVD-209	ENST00000497816	MAP2K2	P36507	400 aa		18.26	■□□□□ 0.51
IVD-209	ENST00000497816	ATF7IP	Q6VMQ6	1270 aa		18.26	■□□□□ 0.51
IVD-209	ENST00000497816	ATG9A	Q7Z3C6	839 aa		18.26	■□□□□ 0.51
IVD-209	ENST00000497816	MTMR14	Q8NCE2	650 aa		18.26	■□□□□ 0.51
IVD-209	ENST00000497816	AIDA	Q96BJ3	306 aa		18.26	■□□□□ 0.51
IVD-209	ENST00000497816	HDAC5	Q9UQL6	1122 aa		18.26	■□□□□ 0.51
IVD-209	ENST00000497816		F8W031	263 aa	Predicted RBP	18.25	■□□□□ 0.51
IVD-209	ENST00000497816	PCDHAC2	Q9Y5I4	1007 aa		18.25	■□□□□ 0.51
IVD-209	ENST00000497816	CTCF	P49711	727 aa	Predicted RBP	18.24	■□□□□ 0.51
IVD-209	ENST00000497816	PUM3	Q15397	648 aa	Known RBP	18.24	■□□□□ 0.51
IVD-209	ENST00000497816	DLGAP5	Q15398	846 aa		18.24	■□□□□ 0.51
IVD-209	ENST00000497816	MFSD14B	Q5SR56	506 aa		18.24	■□□□□ 0.51
IVD-209	ENST00000497816	FRAT1	Q92837	279 aa	Predicted RBP	18.24	■□□□□ 0.51
IVD-209	ENST00000497816	FBXO3	Q9UK99	471 aa		18.24	■□□□□ 0.51
IVD-209	ENST00000497816	AKAP11	Q9UKA4	1901 aa		18.24	■□□□□ 0.51
IVD-209	ENST00000497816	CIAO1	O76071	339 aa		18.23	■□□□□ 0.51
IVD-209	ENST00000497816	GNAI3	P08754	354 aa		18.23	■□□□□ 0.51
IVD-209	ENST00000497816	PRAMEF18	Q5VWM3	479 aa		18.23	■□□□□ 0.51
IVD-209	ENST00000497816	RGMB	Q6NW40	437 aa		18.23	■□□□□ 0.51
IVD-209	ENST00000497816	APOBEC3F	Q8IUX4	373 aa	Known RBP	18.23	■□□□□ 0.51
IVD-209	ENST00000497816	COL1A1	P02452	1464 aa	Predicted RBP	18.23	■□□□□ 0.51
IVD-209	ENST00000497816	FAM155A	B1AL88	458 aa	Predicted RBP	18.23	■□□□□ 0.51
IVD-209	ENST00000497816	FKBP1B	P68106	108 aa		18.23	■□□□□ 0.51
IVD-209	ENST00000497816	CFAP100	Q494V2	611 aa		18.23	■□□□□ 0.51
IVD-209	ENST00000497816	CAVIN4	Q5BKX8	364 aa		18.23	■□□□□ 0.51
IVD-209	ENST00000497816	VPS37D	Q86XT2	251 aa		18.23	■□□□□ 0.51
IVD-209	ENST00000497816	SIL1	Q9H173	461 aa		18.23	■□□□□ 0.51
IVD-209	ENST00000497816	PRDM10	Q9NQV6	1147 aa		18.23	■□□□□ 0.51
IVD-209	ENST00000497816	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	18.23	■□□□□ 0.51
IVD-209	ENST00000497816	SPDYE2B	A6NHP3	402 aa		18.22	■□□□□ 0.51
IVD-209	ENST00000497816	IFIT1	P09914	478 aa	Known RBP	18.22	■□□□□ 0.51
IVD-209	ENST00000497816	SPDYE6	P0CI01	402 aa		18.22	■□□□□ 0.51
IVD-209	ENST00000497816	HSPA8	P11142	646 aa	Known RBP	18.22	■□□□□ 0.51
IVD-209	ENST00000497816	BCAM	P50895	628 aa		18.22	■□□□□ 0.51
IVD-209	ENST00000497816	NOG	Q13253	232 aa		18.22	■□□□□ 0.51
IVD-209	ENST00000497816	CLUAP1	Q96AJ1	413 aa		18.22	■□□□□ 0.51
IVD-209	ENST00000497816	ZIC5	Q96T25	663 aa		18.22	■□□□□ 0.51
IVD-209	ENST00000497816	PA2G4	Q9UQ80	394 aa	Known RBP	18.22	■□□□□ 0.51
IVD-209	ENST00000497816	AOX1	Q06278	1338 aa		18.21	■□□□□ 0.51
IVD-209	ENST00000497816	MTX1	Q13505	466 aa		18.21	■□□□□ 0.51
IVD-209	ENST00000497816	ZKSCAN2	Q63HK3	967 aa		18.21	■□□□□ 0.51
IVD-209	ENST00000497816	LPIN2	Q92539	896 aa		18.21	■□□□□ 0.51
IVD-209	ENST00000497816	PRMT6	Q96LA8	375 aa	Predicted RBP	18.21	■□□□□ 0.51
IVD-209	ENST00000497816	COPRS	Q9NQ92	184 aa		18.21	■□□□□ 0.51
IVD-209	ENST00000497816	SLC5A1	P13866	664 aa		18.2	■□□□□ 0.5
IVD-209	ENST00000497816	ZNF157	P51786	506 aa	Predicted RBP	18.2	■□□□□ 0.5
IVD-209	ENST00000497816	LBX1	P52954	281 aa		18.2	■□□□□ 0.5
IVD-209	ENST00000497816	GRIK5	Q16478	980 aa		18.2	■□□□□ 0.5
IVD-209	ENST00000497816	MOB2	Q70IA6	237 aa		18.2	■□□□□ 0.5
IVD-209	ENST00000497816	CCDC102A	Q96A19	550 aa		18.2	■□□□□ 0.5
IVD-209	ENST00000497816	TTF2	Q9UNY4	1162 aa	Known RBP	18.2	■□□□□ 0.5
IVD-209	ENST00000497816	SLC10A3	P09131	477 aa		18.19	■□□□□ 0.5
IVD-209	ENST00000497816	IL15	P40933	162 aa	Predicted RBP	18.19	■□□□□ 0.5
IVD-209	ENST00000497816	CHAF1A	Q13111	956 aa	Predicted RBP	18.19	■□□□□ 0.5
IVD-209	ENST00000497816	TNS4	Q8IZW8	715 aa		18.19	■□□□□ 0.5
IVD-209	ENST00000497816	TMEM57	Q8N5G2	664 aa		18.19	■□□□□ 0.5
IVD-209	ENST00000497816	CEP126	Q9P2H0	1117 aa		18.19	■□□□□ 0.5
IVD-209	ENST00000497816	SERPINA10	Q9UK55	444 aa		18.19	■□□□□ 0.5
IVD-209	ENST00000497816	SSC5D	A1L4H1	1573 aa		18.19	■□□□□ 0.5
IVD-209	ENST00000497816	CLRN2	A0PK11	232 aa		18.18	■□□□□ 0.5
IVD-209	ENST00000497816	TBC1D22A	Q8WUA7	517 aa		18.18	■□□□□ 0.5
IVD-209	ENST00000497816	BEGAIN	Q9BUH8	593 aa		18.18	■□□□□ 0.5
IVD-209	ENST00000497816	LAMB1	P07942	1786 aa		18.18	■□□□□ 0.5
IVD-209	ENST00000497816	CASP8AP2	Q9UKL3	1982 aa		18.18	■□□□□ 0.5
IVD-209	ENST00000497816	SRGAP3	O43295	1099 aa		18.18	■□□□□ 0.5
IVD-209	ENST00000497816	MYO1B	O43795	1136 aa		18.18	■□□□□ 0.5
IVD-209	ENST00000497816	FRAT2	O75474	233 aa	Predicted RBP	18.18	■□□□□ 0.5
IVD-209	ENST00000497816	RBM5	P52756	815 aa	Known RBP eCLIP	18.18	■□□□□ 0.5
IVD-209	ENST00000497816	ATP2B3	Q16720	1220 aa		18.18	■□□□□ 0.5
IVD-209	ENST00000497816	RASAL3	Q86YV0	1011 aa		18.18	■□□□□ 0.5
IVD-209	ENST00000497816	DEFB129	Q9H1M3	183 aa		18.18	■□□□□ 0.5
IVD-209	ENST00000497816	OTOF	Q9HC10	1997 aa		18.17	■□□□□ 0.5
IVD-209	ENST00000497816	UBE2Q2L	H0YL09	131 aa		18.17	■□□□□ 0.5
IVD-209	ENST00000497816	GNAI2	P04899	355 aa		18.17	■□□□□ 0.5
IVD-209	ENST00000497816	NF2	P35240	595 aa		18.17	■□□□□ 0.5
IVD-209	ENST00000497816	PPP2R3B	Q9Y5P8	575 aa		18.17	■□□□□ 0.5
IVD-209	ENST00000497816	CRK	P46108	304 aa		18.16	■□□□□ 0.5
IVD-209	ENST00000497816	SPDYE2	Q495Y8	402 aa		18.16	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms