RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 CERS5Q8N5B7 392 aa21.64■■□□□ 1.05
SMC4-226ENST00000497311 AKAP11Q9UKA4 1901 aa21.64■■□□□ 1.05
SMC4-226ENST00000497311 UTYO14607 1347 aa21.63■■□□□ 1.05
SMC4-226ENST00000497311 FKBP1AP62942 108 aaKnown RBP21.63■■□□□ 1.05
SMC4-226ENST00000497311 KAZALD1Q96I82 304 aa21.63■■□□□ 1.05
SMC4-226ENST00000497311 MCOLN1Q9GZU1 580 aa21.63■■□□□ 1.05
SMC4-226ENST00000497311 PTPRCP08575 1304 aa21.62■■□□□ 1.05
SMC4-226ENST00000497311 CCDC85CA6NKD9 419 aa21.62■■□□□ 1.05
SMC4-226ENST00000497311 F8W031 263 aaPredicted RBP21.62■■□□□ 1.05
SMC4-226ENST00000497311 UBE4AQ14139 1066 aa21.62■■□□□ 1.05
SMC4-226ENST00000497311 MTMR14Q8NCE2 650 aa21.62■■□□□ 1.05
SMC4-226ENST00000497311 DGKZQ13574 1117 aa21.61■■□□□ 1.05
SMC4-226ENST00000497311 PUS3Q9BZE2 481 aaKnown RBP21.61■■□□□ 1.05
SMC4-226ENST00000497311 BICC1Q9H694 974 aaKnown RBP21.61■■□□□ 1.05
SMC4-226ENST00000497311 JAG2Q9Y219 1238 aa21.61■■□□□ 1.05
SMC4-226ENST00000497311 SLFN5Q08AF3 891 aa21.6■■□□□ 1.05
SMC4-226ENST00000497311 CFAP100Q494V2 611 aa21.6■■□□□ 1.05
SMC4-226ENST00000497311 ARMC9Q7Z3E5 817 aa21.6■■□□□ 1.05
SMC4-226ENST00000497311 SSH1Q8WYL5 1049 aa21.6■■□□□ 1.05
SMC4-226ENST00000497311 MYO1BO43795 1136 aa21.59■■□□□ 1.05
SMC4-226ENST00000497311 PRKG1Q13976 671 aa21.59■■□□□ 1.05
SMC4-226ENST00000497311 RABL6Q3YEC7 729 aaPredicted RBP21.59■■□□□ 1.05
SMC4-226ENST00000497311 DEFB129Q9H1M3 183 aa21.59■■□□□ 1.05
SMC4-226ENST00000497311 RIPOR2Q9Y4F9 1068 aa21.59■■□□□ 1.05
SMC4-226ENST00000497311 COL1A1P02452 1464 aaPredicted RBP21.58■■□□□ 1.05
SMC4-226ENST00000497311 MROH5Q6ZUA9 1318 aa21.58■■□□□ 1.05
SMC4-226ENST00000497311 HIBADHP31937 336 aaKnown RBP21.58■■□□□ 1.05
SMC4-226ENST00000497311 FAM205AQ6ZU69 1335 aa21.57■■□□□ 1.04
SMC4-226ENST00000497311 SPDYE2BA6NHP3 402 aa21.57■■□□□ 1.04
SMC4-226ENST00000497311 SPDYE6P0CI01 402 aa21.57■■□□□ 1.04
SMC4-226ENST00000497311 GYG1P46976 350 aa21.57■■□□□ 1.04
SMC4-226ENST00000497311 RBM5P52756 815 aaKnown RBP eCLIP21.57■■□□□ 1.04
SMC4-226ENST00000497311 TDRD7Q8NHU6 1098 aaKnown RBP21.57■■□□□ 1.04
SMC4-226ENST00000497311 FAM84BQ96KN1 310 aaPredicted RBP21.57■■□□□ 1.04
SMC4-226ENST00000497311 PRMT6Q96LA8 375 aaPredicted RBP21.57■■□□□ 1.04
SMC4-226ENST00000497311 PCDHAC2Q9Y5I4 1007 aa21.57■■□□□ 1.04
SMC4-226ENST00000497311 PPP2R3BQ9Y5P8 575 aa21.57■■□□□ 1.04
SMC4-226ENST00000497311 PTPN12Q05209 780 aaKnown RBP21.56■■□□□ 1.04
SMC4-226ENST00000497311 ALDH1L2Q3SY69 923 aa21.56■■□□□ 1.04
SMC4-226ENST00000497311 MFSD14BQ5SR56 506 aa21.56■■□□□ 1.04
SMC4-226ENST00000497311 ANKRD44Q8N8A2 993 aa21.56■■□□□ 1.04
SMC4-226ENST00000497311 ANGEL1Q9UNK9 670 aaKnown RBP21.56■■□□□ 1.04
SMC4-226ENST00000497311 CLRN2A0PK11 232 aa21.55■■□□□ 1.04
SMC4-226ENST00000497311 LDLRAD1Q5T700 205 aa21.55■■□□□ 1.04
SMC4-226ENST00000497311 VEZTQ9HBM0 779 aa21.55■■□□□ 1.04
SMC4-226ENST00000497311 ECM29Q5VYK3 1845 aa21.55■■□□□ 1.04
SMC4-226ENST00000497311 TM4SF4P48230 202 aa21.54■■□□□ 1.04
SMC4-226ENST00000497311 MKRN3Q13064 507 aaKnown RBP21.54■■□□□ 1.04
SMC4-226ENST00000497311 LRRC24Q50LG9 513 aa21.54■■□□□ 1.04
SMC4-226ENST00000497311 METTL24Q5JXM2 366 aa21.54■■□□□ 1.04
SMC4-226ENST00000497311 VPS37DQ86XT2 251 aa21.54■■□□□ 1.04
SMC4-226ENST00000497311 CDCA7LQ96GN5 454 aa21.54■■□□□ 1.04
SMC4-226ENST00000497311 USP44Q9H0E7 712 aa21.54■■□□□ 1.04
SMC4-226ENST00000497311 PPP1R12BO60237 982 aaPredicted RBP21.53■■□□□ 1.04
SMC4-226ENST00000497311 SUPT20HL1Q3ZLR7 823 aa21.53■■□□□ 1.04
SMC4-226ENST00000497311 SMC4Q9NTJ3 1288 aa21.53■■□□□ 1.04
SMC4-226ENST00000497311 TTF2Q9UNY4 1162 aaKnown RBP21.53■■□□□ 1.04
SMC4-226ENST00000497311 FZD1Q9UP38 647 aa21.53■■□□□ 1.04
SMC4-226ENST00000497311 SREBF2Q12772 1141 aa21.52■■□□□ 1.04
SMC4-226ENST00000497311 MAP3K11Q16584 847 aa21.52■■□□□ 1.04
SMC4-226ENST00000497311 CAVIN4Q5BKX8 364 aa21.52■■□□□ 1.04
SMC4-226ENST00000497311 FBXO33Q7Z6M2 555 aa21.52■■□□□ 1.04
SMC4-226ENST00000497311 SERPINA10Q9UK55 444 aa21.52■■□□□ 1.04
SMC4-226ENST00000497311 PDE8BO95263 885 aa21.51■■□□□ 1.03
SMC4-226ENST00000497311 TBC1D8O95759 1140 aa21.51■■□□□ 1.03
SMC4-226ENST00000497311 SPRYD7Q5W111 196 aa21.51■■□□□ 1.03
SMC4-226ENST00000497311 KLHDC4Q8TBB5 520 aa21.51■■□□□ 1.03
SMC4-226ENST00000497311 SLC10A4Q96EP9 437 aa21.51■■□□□ 1.03
SMC4-226ENST00000497311 AOX1Q06278 1338 aa21.51■■□□□ 1.03
SMC4-226ENST00000497311 FRAT2O75474 233 aaPredicted RBP21.5■■□□□ 1.03
SMC4-226ENST00000497311 RGS19P49795 217 aa21.5■■□□□ 1.03
SMC4-226ENST00000497311 TRMT2AQ8IZ69 625 aaKnown RBP21.5■■□□□ 1.03
SMC4-226ENST00000497311 VGLL2Q8N8G2 317 aa21.5■■□□□ 1.03
SMC4-226ENST00000497311 IQSEC3Q9UPP2 1182 aaPredicted RBP21.5■■□□□ 1.03
SMC4-226ENST00000497311 TNFAIP1Q13829 316 aa21.49■■□□□ 1.03
SMC4-226ENST00000497311 RASA3Q14644 834 aa21.49■■□□□ 1.03
SMC4-226ENST00000497311 NBPF12Q5TAG4 269 aaPredicted RBP21.49■■□□□ 1.03
SMC4-226ENST00000497311 CTU1Q7Z7A3 348 aaKnown RBP21.49■■□□□ 1.03
SMC4-226ENST00000497311 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.49■■□□□ 1.03
SMC4-226ENST00000497311 ZNF70Q9UC06 446 aaPredicted RBP21.49■■□□□ 1.03
SMC4-226ENST00000497311 SSC5DA1L4H1 1573 aa21.48■■□□□ 1.03
SMC4-226ENST00000497311 UNCXA6NJT0 531 aa21.48■■□□□ 1.03
SMC4-226ENST00000497311 CT47B1P0C2W7 299 aaPredicted RBP21.48■■□□□ 1.03
SMC4-226ENST00000497311 MLLT1Q03111 559 aaPredicted RBP21.48■■□□□ 1.03
SMC4-226ENST00000497311 CHAF1AQ13111 956 aaPredicted RBP21.48■■□□□ 1.03
SMC4-226ENST00000497311 SPDYE2Q495Y8 402 aa21.48■■□□□ 1.03
SMC4-226ENST00000497311 DZIP1LQ8IYY4 767 aaKnown RBP21.48■■□□□ 1.03
SMC4-226ENST00000497311 TBC1D22AQ8WUA7 517 aa21.48■■□□□ 1.03
SMC4-226ENST00000497311 TDRD3Q9H7E2 651 aaKnown RBP21.48■■□□□ 1.03
SMC4-226ENST00000497311 CRKP46108 304 aa21.47■■□□□ 1.03
SMC4-226ENST00000497311 IREB2P48200 963 aaKnown RBP21.47■■□□□ 1.03
SMC4-226ENST00000497311 ZNF296Q8WUU4 475 aaPredicted RBP21.47■■□□□ 1.03
SMC4-226ENST00000497311 ARAP2Q8WZ64 1704 aa21.46■■□□□ 1.03
SMC4-226ENST00000497311 MANSC4A6NHS7 340 aaPredicted RBP21.46■■□□□ 1.03
SMC4-226ENST00000497311 IFIT1P09914 478 aaKnown RBP21.46■■□□□ 1.03
SMC4-226ENST00000497311 ZBTB48P10074 688 aaPredicted RBP21.46■■□□□ 1.03
SMC4-226ENST00000497311 BCAMP50895 628 aa21.46■■□□□ 1.03
SMC4-226ENST00000497311 INHBEP58166 350 aa21.46■■□□□ 1.03
SMC4-226ENST00000497311 PUM3Q15397 648 aaKnown RBP21.46■■□□□ 1.03
SMC4-226ENST00000497311 CLMNQ96JQ2 1002 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms