RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 NF2P35240 595 aa18.17■□□□□ 0.5
CXCL12-208ENST00000496375 DGKZQ13574 1117 aa18.17■□□□□ 0.5
CXCL12-208ENST00000496375 TTLL12Q14166 644 aaPredicted RBP18.17■□□□□ 0.5
CXCL12-208ENST00000496375 ZNF804AQ7Z570 1209 aa18.17■□□□□ 0.5
CXCL12-208ENST00000496375 CERS5Q8N5B7 392 aa18.17■□□□□ 0.5
CXCL12-208ENST00000496375 CNNM1Q9NRU3 951 aa18.17■□□□□ 0.5
CXCL12-208ENST00000496375 IL1R1P14778 569 aa18.16■□□□□ 0.5
CXCL12-208ENST00000496375 APOBEC3FQ8IUX4 373 aaKnown RBP18.16■□□□□ 0.5
CXCL12-208ENST00000496375 REM2Q8IYK8 340 aaPredicted RBP18.16■□□□□ 0.5
CXCL12-208ENST00000496375 ZBED3Q96IU2 234 aaPredicted RBP18.16■□□□□ 0.5
CXCL12-208ENST00000496375 SUCLG2Q96I99 432 aa18.15■□□□□ 0.5
CXCL12-208ENST00000496375 F8W031 263 aaPredicted RBP18.14■□□□□ 0.49
CXCL12-208ENST00000496375 DLGAP5Q15398 846 aa18.14■□□□□ 0.49
CXCL12-208ENST00000496375 KAZALD1Q96I82 304 aa18.14■□□□□ 0.49
CXCL12-208ENST00000496375 JAG2Q9Y219 1238 aa18.14■□□□□ 0.49
CXCL12-208ENST00000496375 NBPF7P0C2Y1 421 aaPredicted RBP18.13■□□□□ 0.49
CXCL12-208ENST00000496375 PRKG1Q13976 671 aa18.13■□□□□ 0.49
CXCL12-208ENST00000496375 MRPL50Q8N5N7 158 aaKnown RBP18.13■□□□□ 0.49
CXCL12-208ENST00000496375 ECM29Q5VYK3 1845 aa18.12■□□□□ 0.49
CXCL12-208ENST00000496375 FKBP1AP62942 108 aaKnown RBP18.12■□□□□ 0.49
CXCL12-208ENST00000496375 CFAP100Q494V2 611 aa18.12■□□□□ 0.49
CXCL12-208ENST00000496375 ARMC9Q7Z3E5 817 aa18.12■□□□□ 0.49
CXCL12-208ENST00000496375 MTMR14Q8NCE2 650 aa18.12■□□□□ 0.49
CXCL12-208ENST00000496375 PUS3Q9BZE2 481 aaKnown RBP18.12■□□□□ 0.49
CXCL12-208ENST00000496375 PCDHAC2Q9Y5I4 1007 aa18.12■□□□□ 0.49
CXCL12-208ENST00000496375 COL1A1P02452 1464 aaPredicted RBP18.12■□□□□ 0.49
CXCL12-208ENST00000496375 DEFB129Q9H1M3 183 aa18.11■□□□□ 0.49
CXCL12-208ENST00000496375 UTYO14607 1347 aa18.11■□□□□ 0.49
CXCL12-208ENST00000496375 PTPN12Q05209 780 aaKnown RBP18.1■□□□□ 0.49
CXCL12-208ENST00000496375 MKRN3Q13064 507 aaKnown RBP18.1■□□□□ 0.49
CXCL12-208ENST00000496375 UBE4AQ14139 1066 aa18.1■□□□□ 0.49
CXCL12-208ENST00000496375 ALDH1L2Q3SY69 923 aa18.1■□□□□ 0.49
CXCL12-208ENST00000496375 BICC1Q9H694 974 aaKnown RBP18.1■□□□□ 0.49
CXCL12-208ENST00000496375 ANGEL1Q9UNK9 670 aaKnown RBP18.1■□□□□ 0.49
CXCL12-208ENST00000496375 FAM205AQ6ZU69 1335 aa18.09■□□□□ 0.49
CXCL12-208ENST00000496375 CLRN2A0PK11 232 aa18.09■□□□□ 0.49
CXCL12-208ENST00000496375 SPDYE2BA6NHP3 402 aa18.09■□□□□ 0.49
CXCL12-208ENST00000496375 MYO1BO43795 1136 aa18.09■□□□□ 0.49
CXCL12-208ENST00000496375 SPDYE6P0CI01 402 aa18.09■□□□□ 0.49
CXCL12-208ENST00000496375 GYG1P46976 350 aa18.09■□□□□ 0.49
CXCL12-208ENST00000496375 RABL6Q3YEC7 729 aaPredicted RBP18.09■□□□□ 0.49
CXCL12-208ENST00000496375 PRMT6Q96LA8 375 aaPredicted RBP18.09■□□□□ 0.49
CXCL12-208ENST00000496375 FZD1Q9UP38 647 aa18.09■□□□□ 0.49
CXCL12-208ENST00000496375 PTPRCP08575 1304 aa18.08■□□□□ 0.49
CXCL12-208ENST00000496375 HIBADHP31937 336 aaKnown RBP18.08■□□□□ 0.48
CXCL12-208ENST00000496375 RGS19P49795 217 aa18.08■□□□□ 0.48
CXCL12-208ENST00000496375 RBM5P52756 815 aaKnown RBP eCLIP18.08■□□□□ 0.48
CXCL12-208ENST00000496375 LDLRAD1Q5T700 205 aa18.08■□□□□ 0.48
CXCL12-208ENST00000496375 ANKRD44Q8N8A2 993 aa18.08■□□□□ 0.48
CXCL12-208ENST00000496375 TDRD7Q8NHU6 1098 aaKnown RBP18.08■□□□□ 0.48
CXCL12-208ENST00000496375 SSH1Q8WYL5 1049 aa18.08■□□□□ 0.48
CXCL12-208ENST00000496375 FAM84BQ96KN1 310 aaPredicted RBP18.08■□□□□ 0.48
CXCL12-208ENST00000496375 VEZTQ9HBM0 779 aa18.08■□□□□ 0.48
CXCL12-208ENST00000496375 RIPOR2Q9Y4F9 1068 aa18.08■□□□□ 0.48
CXCL12-208ENST00000496375 PPP2R3BQ9Y5P8 575 aa18.08■□□□□ 0.48
CXCL12-208ENST00000496375 AOX1Q06278 1338 aa18.07■□□□□ 0.48
CXCL12-208ENST00000496375 MROH5Q6ZUA9 1318 aa18.07■□□□□ 0.48
CXCL12-208ENST00000496375 TBC1D8O95759 1140 aa18.07■□□□□ 0.48
CXCL12-208ENST00000496375 TM4SF4P48230 202 aa18.07■□□□□ 0.48
CXCL12-208ENST00000496375 MFSD14BQ5SR56 506 aa18.07■□□□□ 0.48
CXCL12-208ENST00000496375 SSC5DA1L4H1 1573 aa18.07■□□□□ 0.48
CXCL12-208ENST00000496375 MLLT1Q03111 559 aaPredicted RBP18.06■□□□□ 0.48
CXCL12-208ENST00000496375 SREBF2Q12772 1141 aa18.06■□□□□ 0.48
CXCL12-208ENST00000496375 LRRC24Q50LG9 513 aa18.06■□□□□ 0.48
CXCL12-208ENST00000496375 METTL24Q5JXM2 366 aa18.06■□□□□ 0.48
CXCL12-208ENST00000496375 CTU1Q7Z7A3 348 aaKnown RBP18.06■□□□□ 0.48
CXCL12-208ENST00000496375 MAP3K11Q16584 847 aa18.05■□□□□ 0.48
CXCL12-208ENST00000496375 SPRYD7Q5W111 196 aa18.05■□□□□ 0.48
CXCL12-208ENST00000496375 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.05■□□□□ 0.48
CXCL12-208ENST00000496375 TTF2Q9UNY4 1162 aaKnown RBP18.05■□□□□ 0.48
CXCL12-208ENST00000496375 ARAP2Q8WZ64 1704 aa18.05■□□□□ 0.48
CXCL12-208ENST00000496375 PPP1R12BO60237 982 aaPredicted RBP18.04■□□□□ 0.48
CXCL12-208ENST00000496375 SUPT20HL1Q3ZLR7 823 aa18.04■□□□□ 0.48
CXCL12-208ENST00000496375 NBPF12Q5TAG4 269 aaPredicted RBP18.04■□□□□ 0.48
CXCL12-208ENST00000496375 VPS37DQ86XT2 251 aa18.04■□□□□ 0.48
CXCL12-208ENST00000496375 KLHDC4Q8TBB5 520 aa18.04■□□□□ 0.48
CXCL12-208ENST00000496375 ZNF296Q8WUU4 475 aaPredicted RBP18.04■□□□□ 0.48
CXCL12-208ENST00000496375 SLC10A4Q96EP9 437 aa18.04■□□□□ 0.48
CXCL12-208ENST00000496375 USP44Q9H0E7 712 aa18.04■□□□□ 0.48
CXCL12-208ENST00000496375 SERPINA10Q9UK55 444 aa18.04■□□□□ 0.48
CXCL12-208ENST00000496375 IQSEC3Q9UPP2 1182 aaPredicted RBP18.04■□□□□ 0.48
CXCL12-208ENST00000496375 RARSP54136 660 aaKnown RBP18.03■□□□□ 0.48
CXCL12-208ENST00000496375 RASA3Q14644 834 aa18.03■□□□□ 0.48
CXCL12-208ENST00000496375 FBXO33Q7Z6M2 555 aa18.03■□□□□ 0.48
CXCL12-208ENST00000496375 CLMNQ96JQ2 1002 aa18.03■□□□□ 0.48
CXCL12-208ENST00000496375 PDE8BO95263 885 aa18.02■□□□□ 0.48
CXCL12-208ENST00000496375 CHAF1AQ13111 956 aaPredicted RBP18.02■□□□□ 0.48
CXCL12-208ENST00000496375 SPDYE2Q495Y8 402 aa18.02■□□□□ 0.48
CXCL12-208ENST00000496375 VGLL2Q8N8G2 317 aa18.02■□□□□ 0.48
CXCL12-208ENST00000496375 TDRD3Q9H7E2 651 aaKnown RBP18.02■□□□□ 0.48
CXCL12-208ENST00000496375 ZNF70Q9UC06 446 aaPredicted RBP18.02■□□□□ 0.48
CXCL12-208ENST00000496375 MANSC4A6NHS7 340 aaPredicted RBP18.01■□□□□ 0.47
CXCL12-208ENST00000496375 GPR25O00155 361 aa18.01■□□□□ 0.47
CXCL12-208ENST00000496375 FRAT2O75474 233 aaPredicted RBP18.01■□□□□ 0.47
CXCL12-208ENST00000496375 TNFAIP1Q13829 316 aa18.01■□□□□ 0.47
CXCL12-208ENST00000496375 GRIK5Q16478 980 aa18.01■□□□□ 0.47
CXCL12-208ENST00000496375 CAVIN4Q5BKX8 364 aa18.01■□□□□ 0.47
CXCL12-208ENST00000496375 DZIP1LQ8IYY4 767 aaKnown RBP18.01■□□□□ 0.47
CXCL12-208ENST00000496375 WNK4Q96J92 1243 aa18.01■□□□□ 0.47
CXCL12-208ENST00000496375 SMC4Q9NTJ3 1288 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms