RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 GGA1Q9UJY5 639 aa18.3■□□□□ 0.52
GAPDH-210ENST00000496049 TRPM7Q96QT4 1865 aa18.3■□□□□ 0.52
GAPDH-210ENST00000496049 ZNF804BA4D1E1 1349 aa18.29■□□□□ 0.52
GAPDH-210ENST00000496049 GLRX3O76003 335 aaKnown RBP18.29■□□□□ 0.52
GAPDH-210ENST00000496049 FGFR2P21802 821 aa18.29■□□□□ 0.52
GAPDH-210ENST00000496049 TIMM10P62072 90 aa18.29■□□□□ 0.52
GAPDH-210ENST00000496049 XAGE2Q96GT9 111 aa18.29■□□□□ 0.52
GAPDH-210ENST00000496049 L3MBTL3Q96JM7 780 aaPredicted RBP18.29■□□□□ 0.52
GAPDH-210ENST00000496049 DBNDD2Q9BQY9 259 aa18.29■□□□□ 0.52
GAPDH-210ENST00000496049 TLR7Q9NYK1 1049 aaKnown RBP18.29■□□□□ 0.52
GAPDH-210ENST00000496049 PODXL2Q9NZ53 605 aa18.29■□□□□ 0.52
GAPDH-210ENST00000496049 NSFL1CQ9UNZ2 370 aaKnown RBP18.29■□□□□ 0.52
GAPDH-210ENST00000496049 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.29■□□□□ 0.52
GAPDH-210ENST00000496049 AOC2O75106 756 aa18.28■□□□□ 0.52
GAPDH-210ENST00000496049 UFL1O94874 794 aa18.28■□□□□ 0.52
GAPDH-210ENST00000496049 ECE1P42892 770 aa18.28■□□□□ 0.52
GAPDH-210ENST00000496049 GPSM2P81274 684 aa18.28■□□□□ 0.52
GAPDH-210ENST00000496049 CAVIN4Q5BKX8 364 aa18.28■□□□□ 0.52
GAPDH-210ENST00000496049 TTC39AQ5SRH9 613 aa18.28■□□□□ 0.52
GAPDH-210ENST00000496049 DPP8Q6V1X1 898 aaPredicted RBP18.28■□□□□ 0.52
GAPDH-210ENST00000496049 TTC22Q5TAA0 569 aa18.27■□□□□ 0.52
GAPDH-210ENST00000496049 VPS37DQ86XT2 251 aa18.27■□□□□ 0.52
GAPDH-210ENST00000496049 MPNDQ8N594 471 aa18.27■□□□□ 0.52
GAPDH-210ENST00000496049 GNL3LQ9NVN8 582 aaKnown RBP18.27■□□□□ 0.52
GAPDH-210ENST00000496049 UQCRFS1P1P0C7P4 283 aa18.26■□□□□ 0.51
GAPDH-210ENST00000496049 ADORA1P30542 326 aa18.26■□□□□ 0.51
GAPDH-210ENST00000496049 EPHX2P34913 555 aa18.26■□□□□ 0.51
GAPDH-210ENST00000496049 FMR1Q06787 632 aaKnown RBP eCLIP18.26■□□□□ 0.51
GAPDH-210ENST00000496049 CCDC93Q567U6 631 aa18.26■□□□□ 0.51
GAPDH-210ENST00000496049 BMP2KLQ5H9B9 411 aa18.26■□□□□ 0.51
GAPDH-210ENST00000496049 EYA3Q99504 573 aa18.26■□□□□ 0.51
GAPDH-210ENST00000496049 HACL1Q9UJ83 578 aa18.26■□□□□ 0.51
GAPDH-210ENST00000496049 ZNF541Q9H0D2 1346 aa18.25■□□□□ 0.51
GAPDH-210ENST00000496049 LTBP3Q9NS15 1303 aa18.25■□□□□ 0.51
GAPDH-210ENST00000496049 AK9Q5TCS8 1911 aa18.25■□□□□ 0.51
GAPDH-210ENST00000496049 C6orf229H3BNL8 230 aa18.25■□□□□ 0.51
GAPDH-210ENST00000496049 ATP5JP18859 108 aa18.25■□□□□ 0.51
GAPDH-210ENST00000496049 TSHZ3Q63HK5 1081 aa18.25■□□□□ 0.51
GAPDH-210ENST00000496049 SUPT20HQ8NEM7 779 aa18.25■□□□□ 0.51
GAPDH-210ENST00000496049 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.25■□□□□ 0.51
GAPDH-210ENST00000496049 MED23Q9ULK4 1368 aa18.25■□□□□ 0.51
GAPDH-210ENST00000496049 MYH13Q9UKX3 1938 aa18.25■□□□□ 0.51
GAPDH-210ENST00000496049 DUOX1Q9NRD9 1551 aa18.25■□□□□ 0.51
GAPDH-210ENST00000496049 ZNF804AQ7Z570 1209 aa18.24■□□□□ 0.51
GAPDH-210ENST00000496049 RTKN2Q8IZC4 609 aa18.24■□□□□ 0.51
GAPDH-210ENST00000496049 TBC1D16Q8TBP0 767 aa18.24■□□□□ 0.51
GAPDH-210ENST00000496049 PI4K2BQ8TCG2 481 aa18.24■□□□□ 0.51
GAPDH-210ENST00000496049 CCDC102BQ68D86 513 aa18.23■□□□□ 0.51
GAPDH-210ENST00000496049 C15orf52Q6ZUT6 534 aaKnown RBP18.23■□□□□ 0.51
GAPDH-210ENST00000496049 ZNF512BQ96KM6 892 aaPredicted RBP18.23■□□□□ 0.51
GAPDH-210ENST00000496049 TRIM6-TRIM34B2RNG4 842 aa18.22■□□□□ 0.51
GAPDH-210ENST00000496049 ARID4AP29374 1257 aaPredicted RBP18.22■□□□□ 0.51
GAPDH-210ENST00000496049 C7orf43Q8WVR3 580 aa18.22■□□□□ 0.51
GAPDH-210ENST00000496049 SNAP23O00161 211 aa18.21■□□□□ 0.51
GAPDH-210ENST00000496049 SEMA3EO15041 775 aa18.21■□□□□ 0.51
GAPDH-210ENST00000496049 HIBADHP31937 336 aaKnown RBP18.21■□□□□ 0.51
GAPDH-210ENST00000496049 HAUS7Q99871 368 aa18.21■□□□□ 0.51
GAPDH-210ENST00000496049 BOLA2Q9H3K6 86 aa18.21■□□□□ 0.51
GAPDH-210ENST00000496049 G3V3G9 751 aa18.2■□□□□ 0.5
GAPDH-210ENST00000496049 CA12O43570 354 aa18.2■□□□□ 0.5
GAPDH-210ENST00000496049 FRAT2O75474 233 aaPredicted RBP18.2■□□□□ 0.5
GAPDH-210ENST00000496049 GSPT1P15170 499 aaKnown RBP18.2■□□□□ 0.5
GAPDH-210ENST00000496049 PHKA1P46020 1223 aa18.2■□□□□ 0.5
GAPDH-210ENST00000496049 GYG1P46976 350 aa18.2■□□□□ 0.5
GAPDH-210ENST00000496049 DCAF8Q5TAQ9 597 aa18.2■□□□□ 0.5
GAPDH-210ENST00000496049 CASC1Q6TDU7 716 aa18.2■□□□□ 0.5
GAPDH-210ENST00000496049 OLFM4Q6UX06 510 aa18.2■□□□□ 0.5
GAPDH-210ENST00000496049 PNMA8AQ86V59 439 aaPredicted RBP18.2■□□□□ 0.5
GAPDH-210ENST00000496049 DNAJC2Q99543 621 aaKnown RBP18.2■□□□□ 0.5
GAPDH-210ENST00000496049 ZC3H12CQ9C0D7 883 aaKnown RBP18.2■□□□□ 0.5
GAPDH-210ENST00000496049 POLLQ9UGP5 575 aa18.2■□□□□ 0.5
GAPDH-210ENST00000496049 BCAMP50895 628 aa18.19■□□□□ 0.5
GAPDH-210ENST00000496049 WASHC4Q2M389 1173 aa18.19■□□□□ 0.5
GAPDH-210ENST00000496049 SLC51AQ86UW1 340 aa18.19■□□□□ 0.5
GAPDH-210ENST00000496049 SNED1Q8TER0 1413 aa18.19■□□□□ 0.5
GAPDH-210ENST00000496049 RILPL2Q969X0 211 aa18.19■□□□□ 0.5
GAPDH-210ENST00000496049 EVI5LQ96CN4 794 aa18.19■□□□□ 0.5
GAPDH-210ENST00000496049 PSMD1Q99460 953 aa18.19■□□□□ 0.5
GAPDH-210ENST00000496049 RTFDC1Q9BY42 306 aaPredicted RBP18.19■□□□□ 0.5
GAPDH-210ENST00000496049 KLRK1P26718 216 aa18.18■□□□□ 0.5
GAPDH-210ENST00000496049 MAP2K2P36507 400 aa18.18■□□□□ 0.5
GAPDH-210ENST00000496049 FKBP4Q02790 459 aaKnown RBP eCLIP18.18■□□□□ 0.5
GAPDH-210ENST00000496049 TTF1Q15361 905 aaPredicted RBP18.18■□□□□ 0.5
GAPDH-210ENST00000496049 LRRFIP1Q32MZ4 808 aaKnown RBP18.18■□□□□ 0.5
GAPDH-210ENST00000496049 FBXO33Q7Z6M2 555 aa18.18■□□□□ 0.5
GAPDH-210ENST00000496049 FAM84BQ96KN1 310 aaPredicted RBP18.18■□□□□ 0.5
GAPDH-210ENST00000496049 DENND2AQ9ULE3 1009 aa18.18■□□□□ 0.5
GAPDH-210ENST00000496049 PDS5AQ29RF7 1337 aaKnown RBP18.18■□□□□ 0.5
GAPDH-210ENST00000496049 IRS2Q9Y4H2 1338 aa18.18■□□□□ 0.5
GAPDH-210ENST00000496049 RFX7Q2KHR2 1363 aa18.17■□□□□ 0.5
GAPDH-210ENST00000496049 SDSP20132 328 aa18.17■□□□□ 0.5
GAPDH-210ENST00000496049 SPATA5Q8NB90 893 aa18.17■□□□□ 0.5
GAPDH-210ENST00000496049 COA1Q9GZY4 146 aa18.17■□□□□ 0.5
GAPDH-210ENST00000496049 PAG1Q9NWQ8 432 aa18.17■□□□□ 0.5
GAPDH-210ENST00000496049 AKAP11Q9UKA4 1901 aa18.16■□□□□ 0.5
GAPDH-210ENST00000496049 TRAF5O00463 557 aa18.16■□□□□ 0.5
GAPDH-210ENST00000496049 ZBTB22O15209 634 aa18.16■□□□□ 0.5
GAPDH-210ENST00000496049 CDC45O75419 566 aa18.16■□□□□ 0.5
GAPDH-210ENST00000496049 MAP4K4O95819 1239 aaPredicted RBP18.16■□□□□ 0.5
GAPDH-210ENST00000496049 MCAMP43121 646 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms