RNA–Protein interactions for RNA: ENST00000495546.1

C2orf88-209, Transcript of chromosome 2 open reading frame 88, humanhuman

TSL 4

Gene C2orf88, Length 387 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-209ENST00000495546 MXD3Q9BW11 206 aa19■□□□□ 0.63
C2orf88-209ENST00000495546 TAF1DQ9H5J8 278 aaPredicted RBP19■□□□□ 0.63
C2orf88-209ENST00000495546 DBNLQ9UJU6 430 aaKnown RBP19■□□□□ 0.63
C2orf88-209ENST00000495546 IQSEC3Q9UPP2 1182 aaPredicted RBP19■□□□□ 0.63
C2orf88-209ENST00000495546 SEMA3EO15041 775 aa18.99■□□□□ 0.63
C2orf88-209ENST00000495546 IL1RAPL2Q9NP60 686 aa18.99■□□□□ 0.63
C2orf88-209ENST00000495546 TLR7Q9NYK1 1049 aaKnown RBP18.99■□□□□ 0.63
C2orf88-209ENST00000495546 SHTN1A0MZ66 631 aa18.98■□□□□ 0.63
C2orf88-209ENST00000495546 ARID4AP29374 1257 aaPredicted RBP18.98■□□□□ 0.63
C2orf88-209ENST00000495546 LMOD1P29536 600 aaPredicted RBP18.98■□□□□ 0.63
C2orf88-209ENST00000495546 GNL3LQ9NVN8 582 aaKnown RBP18.98■□□□□ 0.63
C2orf88-209ENST00000495546 CNOT7Q9UIV1 285 aaKnown RBP18.98■□□□□ 0.63
C2orf88-209ENST00000495546 PDS5AQ29RF7 1337 aaKnown RBP18.98■□□□□ 0.63
C2orf88-209ENST00000495546 APBB1O00213 710 aa18.97■□□□□ 0.63
C2orf88-209ENST00000495546 EPHX2P34913 555 aa18.97■□□□□ 0.63
C2orf88-209ENST00000495546 ZNF280AP59817 542 aaPredicted RBP18.97■□□□□ 0.63
C2orf88-209ENST00000495546 MICALL2Q8IY33 904 aa18.97■□□□□ 0.63
C2orf88-209ENST00000495546 CLASRPQ8N2M8 674 aaKnown RBP18.97■□□□□ 0.63
C2orf88-209ENST00000495546 FBXW7Q969H0 707 aa18.97■□□□□ 0.63
C2orf88-209ENST00000495546 LRRCC1Q9C099 1032 aa18.97■□□□□ 0.63
C2orf88-209ENST00000495546 CCDC8Q9H0W5 538 aaPredicted RBP18.97■□□□□ 0.63
C2orf88-209ENST00000495546 JAG2Q9Y219 1238 aa18.97■□□□□ 0.63
C2orf88-209ENST00000495546 ADAMTSL1Q8N6G6 1762 aa18.96■□□□□ 0.63
C2orf88-209ENST00000495546 RASGRF1Q13972 1273 aa18.96■□□□□ 0.63
C2orf88-209ENST00000495546 AACSQ86V21 672 aa18.96■□□□□ 0.63
C2orf88-209ENST00000495546 ZNF512BQ96KM6 892 aaPredicted RBP18.96■□□□□ 0.63
C2orf88-209ENST00000495546 ADARB2Q9NS39 739 aaKnown RBP18.96■□□□□ 0.63
C2orf88-209ENST00000495546 DENND2AQ9ULE3 1009 aa18.96■□□□□ 0.63
C2orf88-209ENST00000495546 FRAT2O75474 233 aaPredicted RBP18.95■□□□□ 0.62
C2orf88-209ENST00000495546 IGHDP01880 384 aa18.95■□□□□ 0.62
C2orf88-209ENST00000495546 USP17L8P0C7I0 530 aa18.95■□□□□ 0.62
C2orf88-209ENST00000495546 MMP14P50281 582 aa18.95■□□□□ 0.62
C2orf88-209ENST00000495546 CHAF1AQ13111 956 aaPredicted RBP18.95■□□□□ 0.62
C2orf88-209ENST00000495546 MFSD14BQ5SR56 506 aa18.95■□□□□ 0.62
C2orf88-209ENST00000495546 TBC1D22AQ8WUA7 517 aa18.95■□□□□ 0.62
C2orf88-209ENST00000495546 GCC1Q96CN9 775 aa18.95■□□□□ 0.62
C2orf88-209ENST00000495546 RWDD1Q9H446 243 aaPredicted RBP18.95■□□□□ 0.62
C2orf88-209ENST00000495546 SALL1Q9NSC2 1324 aa18.95■□□□□ 0.62
C2orf88-209ENST00000495546 H7C1D1 291 aa18.94■□□□□ 0.62
C2orf88-209ENST00000495546 SMARCA5O60264 1052 aaPredicted RBP18.94■□□□□ 0.62
C2orf88-209ENST00000495546 EGFRP00533 1210 aa18.94■□□□□ 0.62
C2orf88-209ENST00000495546 UQCRFS1P1P0C7P4 283 aa18.94■□□□□ 0.62
C2orf88-209ENST00000495546 GORABQ5T7V8 394 aa18.94■□□□□ 0.62
C2orf88-209ENST00000495546 USP50Q70EL3 339 aaPredicted RBP18.94■□□□□ 0.62
C2orf88-209ENST00000495546 PNMA8AQ86V59 439 aaPredicted RBP18.94■□□□□ 0.62
C2orf88-209ENST00000495546 SMC5Q8IY18 1101 aa18.94■□□□□ 0.62
C2orf88-209ENST00000495546 HMG20BQ9P0W2 317 aa18.94■□□□□ 0.62
C2orf88-209ENST00000495546 MYH13Q9UKX3 1938 aa18.94■□□□□ 0.62
C2orf88-209ENST00000495546 POTEIP0CG38 1075 aa18.93■□□□□ 0.62
C2orf88-209ENST00000495546 POTEJP0CG39 1038 aa18.93■□□□□ 0.62
C2orf88-209ENST00000495546 MCAMP43121 646 aa18.93■□□□□ 0.62
C2orf88-209ENST00000495546 HIRAP54198 1017 aaPredicted RBP18.93■□□□□ 0.62
C2orf88-209ENST00000495546 SCARF1Q14162 830 aa18.93■□□□□ 0.62
C2orf88-209ENST00000495546 GRIK5Q16478 980 aa18.93■□□□□ 0.62
C2orf88-209ENST00000495546 CCDC158Q5M9N0 1113 aa18.93■□□□□ 0.62
C2orf88-209ENST00000495546 KIAA0825Q8IV33 1275 aa18.93■□□□□ 0.62
C2orf88-209ENST00000495546 WDR66Q8TBY9 1149 aa18.93■□□□□ 0.62
C2orf88-209ENST00000495546 TRPM4Q8TD43 1214 aa18.93■□□□□ 0.62
C2orf88-209ENST00000495546 TOMM70O94826 608 aa18.92■□□□□ 0.62
C2orf88-209ENST00000495546 SAMD7Q7Z3H4 446 aa18.92■□□□□ 0.62
C2orf88-209ENST00000495546 SUGT1Q9Y2Z0 365 aa18.92■□□□□ 0.62
C2orf88-209ENST00000495546 IFIT2P09913 472 aaKnown RBP18.91■□□□□ 0.62
C2orf88-209ENST00000495546 TTC39AQ5SRH9 613 aa18.91■□□□□ 0.62
C2orf88-209ENST00000495546 PI16Q6UXB8 463 aa18.91■□□□□ 0.62
C2orf88-209ENST00000495546 SPATA5Q8NB90 893 aa18.91■□□□□ 0.62
C2orf88-209ENST00000495546 RBM46Q8TBY0 533 aaKnown RBP18.91■□□□□ 0.62
C2orf88-209ENST00000495546 ZBED3Q96IU2 234 aaPredicted RBP18.91■□□□□ 0.62
C2orf88-209ENST00000495546 MYOZ2Q9NPC6 264 aa18.91■□□□□ 0.62
C2orf88-209ENST00000495546 PGAP2Q9UHJ9 254 aa18.91■□□□□ 0.62
C2orf88-209ENST00000495546 AKAP11Q9UKA4 1901 aa18.91■□□□□ 0.62
C2orf88-209ENST00000495546 KIF4BQ2VIQ3 1234 aa18.9■□□□□ 0.62
C2orf88-209ENST00000495546 TBC1D10BQ4KMP7 808 aaPredicted RBP18.9■□□□□ 0.62
C2orf88-209ENST00000495546 LDHDQ86WU2 507 aa18.9■□□□□ 0.62
C2orf88-209ENST00000495546 OGFOD1Q8N543 542 aa18.9■□□□□ 0.62
C2orf88-209ENST00000495546 EAPPQ56P03 285 aaPredicted RBP18.89■□□□□ 0.61
C2orf88-209ENST00000495546 C16orf71Q8IYS4 520 aaPredicted RBP18.89■□□□□ 0.61
C2orf88-209ENST00000495546 MTMR14Q8NCE2 650 aa18.89■□□□□ 0.61
C2orf88-209ENST00000495546 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.89■□□□□ 0.61
C2orf88-209ENST00000495546 HDAC9Q9UKV0 1011 aa18.89■□□□□ 0.61
C2orf88-209ENST00000495546 TTF2Q9UNY4 1162 aaKnown RBP18.89■□□□□ 0.61
C2orf88-209ENST00000495546 F8W031 263 aaPredicted RBP18.88■□□□□ 0.61
C2orf88-209ENST00000495546 PRDX5P30044 214 aa18.88■□□□□ 0.61
C2orf88-209ENST00000495546 HDLBPQ00341 1268 aaKnown RBP18.88■□□□□ 0.61
C2orf88-209ENST00000495546 ZC3H15Q8WU90 426 aaKnown RBP18.88■□□□□ 0.61
C2orf88-209ENST00000495546 MRIQ9BWK5 157 aa18.88■□□□□ 0.61
C2orf88-209ENST00000495546 CHADLQ6NUI6 762 aa18.87■□□□□ 0.61
C2orf88-209ENST00000495546 ZGPATQ8N5A5 531 aaKnown RBP18.87■□□□□ 0.61
C2orf88-209ENST00000495546 SALL3Q9BXA9 1300 aa18.87■□□□□ 0.61
C2orf88-209ENST00000495546 SNRKQ9NRH2 765 aa18.87■□□□□ 0.61
C2orf88-209ENST00000495546 SERPINA10Q9UK55 444 aa18.87■□□□□ 0.61
C2orf88-209ENST00000495546 MAST3O60307 1309 aa18.86■□□□□ 0.61
C2orf88-209ENST00000495546 WNT10BO00744 389 aa18.86■□□□□ 0.61
C2orf88-209ENST00000495546 CYP2E1P05181 493 aaPredicted RBP18.86■□□□□ 0.61
C2orf88-209ENST00000495546 ATP5JP18859 108 aa18.86■□□□□ 0.61
C2orf88-209ENST00000495546 ZAP70P43403 619 aa18.86■□□□□ 0.61
C2orf88-209ENST00000495546 RBM26Q5T8P6 1007 aaKnown RBP18.86■□□□□ 0.61
C2orf88-209ENST00000495546 ANKRD45Q5TZF3 282 aa18.86■□□□□ 0.61
C2orf88-209ENST00000495546 SMC1BQ8NDV3 1235 aa18.86■□□□□ 0.61
C2orf88-209ENST00000495546 PCDHAC2Q9Y5I4 1007 aa18.86■□□□□ 0.61
C2orf88-209ENST00000495546 ASTN2O75129 1339 aaPredicted RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms