RNA–Protein interactions for RNA: ENST00000494891.5

NEPRO-222, Transcript of nucleolus and neural progenitor protein, human

TSL 4

Gene NEPRO, Length 547 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-222	ENST00000494891	MAP2K1	Q02750	393 aa	Predicted RBP	12.85	□□□□□ -0.35
NEPRO-222	ENST00000494891	PUM3	Q15397	648 aa	Known RBP	12.85	□□□□□ -0.35
NEPRO-222	ENST00000494891	NBPF9	Q3BBW0	867 aa		12.85	□□□□□ -0.35
NEPRO-222	ENST00000494891	METTL24	Q5JXM2	366 aa		12.85	□□□□□ -0.35
NEPRO-222	ENST00000494891	ATG9A	Q7Z3C6	839 aa		12.85	□□□□□ -0.35
NEPRO-222	ENST00000494891	CAPNS2	Q96L46	248 aa		12.85	□□□□□ -0.35
NEPRO-222	ENST00000494891	MEIS3	Q99687	375 aa		12.85	□□□□□ -0.35
NEPRO-222	ENST00000494891	MXD3	Q9BW11	206 aa		12.85	□□□□□ -0.35
NEPRO-222	ENST00000494891	COPRS	Q9NQ92	184 aa		12.85	□□□□□ -0.35
NEPRO-222	ENST00000494891	ECM29	Q5VYK3	1845 aa		12.85	□□□□□ -0.35
NEPRO-222	ENST00000494891	ASTN2	O75129	1339 aa	Predicted RBP	12.85	□□□□□ -0.35
NEPRO-222	ENST00000494891	ADM5	C9JUS6	153 aa		12.84	□□□□□ -0.35
NEPRO-222	ENST00000494891	PLIN1	O60240	522 aa		12.84	□□□□□ -0.35
NEPRO-222	ENST00000494891	CAVIN4	Q5BKX8	364 aa		12.84	□□□□□ -0.35
NEPRO-222	ENST00000494891	KIAA0825	Q8IV33	1275 aa		12.84	□□□□□ -0.35
NEPRO-222	ENST00000494891	C2orf69	Q8N8R5	385 aa		12.84	□□□□□ -0.35
NEPRO-222	ENST00000494891	KLHDC4	Q8TBB5	520 aa		12.84	□□□□□ -0.35
NEPRO-222	ENST00000494891	CDCA5	Q96FF9	252 aa		12.84	□□□□□ -0.35
NEPRO-222	ENST00000494891	GBA2	Q9HCG7	927 aa	Predicted RBP	12.84	□□□□□ -0.35
NEPRO-222	ENST00000494891	LRRFIP2	Q9Y608	721 aa	Known RBP	12.84	□□□□□ -0.35
NEPRO-222	ENST00000494891	GYG1	P46976	350 aa		12.83	□□□□□ -0.36
NEPRO-222	ENST00000494891	ZKSCAN2	Q63HK3	967 aa		12.83	□□□□□ -0.36
NEPRO-222	ENST00000494891	CYP4F22	Q6NT55	531 aa		12.83	□□□□□ -0.36
NEPRO-222	ENST00000494891	APOBEC3F	Q8IUX4	373 aa	Known RBP	12.83	□□□□□ -0.36
NEPRO-222	ENST00000494891	TBC1D22A	Q8WUA7	517 aa		12.83	□□□□□ -0.36
NEPRO-222	ENST00000494891	LPIN2	Q92539	896 aa		12.83	□□□□□ -0.36
NEPRO-222	ENST00000494891	FBXW7	Q969H0	707 aa		12.83	□□□□□ -0.36
NEPRO-222	ENST00000494891	MRI	Q9BWK5	157 aa		12.83	□□□□□ -0.36
NEPRO-222	ENST00000494891	SUGT1	Q9Y2Z0	365 aa		12.83	□□□□□ -0.36
NEPRO-222	ENST00000494891	PAPPA2	Q9BXP8	1791 aa		12.83	□□□□□ -0.36
NEPRO-222	ENST00000494891	SPDYE2B	A6NHP3	402 aa		12.82	□□□□□ -0.36
NEPRO-222	ENST00000494891	IFIT1	P09914	478 aa	Known RBP	12.82	□□□□□ -0.36
NEPRO-222	ENST00000494891	SPDYE6	P0CI01	402 aa		12.82	□□□□□ -0.36
NEPRO-222	ENST00000494891	IL15	P40933	162 aa	Predicted RBP	12.82	□□□□□ -0.36
NEPRO-222	ENST00000494891	HUNK	P57058	714 aa		12.82	□□□□□ -0.36
NEPRO-222	ENST00000494891	HDLBP	Q00341	1268 aa	Known RBP	12.82	□□□□□ -0.36
NEPRO-222	ENST00000494891	NOG	Q13253	232 aa		12.82	□□□□□ -0.36
NEPRO-222	ENST00000494891	PRDM10	Q9NQV6	1147 aa		12.82	□□□□□ -0.36
NEPRO-222	ENST00000494891	SERPINA10	Q9UK55	444 aa		12.82	□□□□□ -0.36
NEPRO-222	ENST00000494891	PPP2R3B	Q9Y5P8	575 aa		12.82	□□□□□ -0.36
NEPRO-222	ENST00000494891	DLGAP5	Q15398	846 aa		12.81	□□□□□ -0.36
NEPRO-222	ENST00000494891	MFSD14B	Q5SR56	506 aa		12.81	□□□□□ -0.36
NEPRO-222	ENST00000494891	RGMB	Q6NW40	437 aa		12.81	□□□□□ -0.36
NEPRO-222	ENST00000494891	DLK2	Q6UY11	383 aa		12.81	□□□□□ -0.36
NEPRO-222	ENST00000494891	CCDC102A	Q96A19	550 aa		12.81	□□□□□ -0.36
NEPRO-222	ENST00000494891	ZNF408	Q9H9D4	720 aa		12.81	□□□□□ -0.36
NEPRO-222	ENST00000494891	FAM155A	B1AL88	458 aa	Predicted RBP	12.8	□□□□□ -0.36
NEPRO-222	ENST00000494891	FOXN1	O15353	648 aa		12.8	□□□□□ -0.36
NEPRO-222	ENST00000494891	CA12	O43570	354 aa		12.8	□□□□□ -0.36
NEPRO-222	ENST00000494891	GNAI2	P04899	355 aa		12.8	□□□□□ -0.36
NEPRO-222	ENST00000494891	SLC5A1	P13866	664 aa		12.8	□□□□□ -0.36
NEPRO-222	ENST00000494891	CTCF	P49711	727 aa	Predicted RBP	12.8	□□□□□ -0.36
NEPRO-222	ENST00000494891	CFAP100	Q494V2	611 aa		12.8	□□□□□ -0.36
NEPRO-222	ENST00000494891	VPS37D	Q86XT2	251 aa		12.8	□□□□□ -0.36
NEPRO-222	ENST00000494891	PIAS4	Q8N2W9	510 aa	Predicted RBP	12.8	□□□□□ -0.36
NEPRO-222	ENST00000494891	FRAT1	Q92837	279 aa	Predicted RBP	12.8	□□□□□ -0.36
NEPRO-222	ENST00000494891	CEP126	Q9P2H0	1117 aa		12.8	□□□□□ -0.36
NEPRO-222	ENST00000494891	UNCX	A6NJT0	531 aa		12.79	□□□□□ -0.36
NEPRO-222	ENST00000494891	SEMA3E	O15041	775 aa		12.79	□□□□□ -0.36
NEPRO-222	ENST00000494891	MYO1B	O43795	1136 aa		12.79	□□□□□ -0.36
NEPRO-222	ENST00000494891	BCAM	P50895	628 aa		12.79	□□□□□ -0.36
NEPRO-222	ENST00000494891	COL13A1	Q5TAT6	717 aa	Predicted RBP	12.79	□□□□□ -0.36
NEPRO-222	ENST00000494891	IFFO2	Q5TF58	517 aa		12.79	□□□□□ -0.36
NEPRO-222	ENST00000494891	REM2	Q8IYK8	340 aa	Predicted RBP	12.79	□□□□□ -0.36
NEPRO-222	ENST00000494891	TMEM57	Q8N5G2	664 aa		12.79	□□□□□ -0.36
NEPRO-222	ENST00000494891	AIDA	Q96BJ3	306 aa		12.79	□□□□□ -0.36
NEPRO-222	ENST00000494891	SRGAP3	O43295	1099 aa		12.78	□□□□□ -0.36
NEPRO-222	ENST00000494891	SLC10A3	P09131	477 aa		12.78	□□□□□ -0.36
NEPRO-222	ENST00000494891	NF2	P35240	595 aa		12.78	□□□□□ -0.36
NEPRO-222	ENST00000494891	MAP3K11	Q16584	847 aa		12.78	□□□□□ -0.36
NEPRO-222	ENST00000494891	ATP2B3	Q16720	1220 aa		12.78	□□□□□ -0.36
NEPRO-222	ENST00000494891	DZIP1L	Q8IYY4	767 aa	Known RBP	12.78	□□□□□ -0.36
NEPRO-222	ENST00000494891	PRMT6	Q96LA8	375 aa	Predicted RBP	12.78	□□□□□ -0.36
NEPRO-222	ENST00000494891	DEFB129	Q9H1M3	183 aa		12.78	□□□□□ -0.36
NEPRO-222	ENST00000494891	TTF2	Q9UNY4	1162 aa	Known RBP	12.78	□□□□□ -0.36
NEPRO-222	ENST00000494891	TNN	Q9UQP3	1299 aa		12.78	□□□□□ -0.36
NEPRO-222	ENST00000494891	MAST3	O60307	1309 aa		12.78	□□□□□ -0.36
NEPRO-222	ENST00000494891	PDS5A	Q29RF7	1337 aa	Known RBP	12.78	□□□□□ -0.36
NEPRO-222	ENST00000494891	SALL1	Q9NSC2	1324 aa		12.78	□□□□□ -0.36
NEPRO-222	ENST00000494891	MYH13	Q9UKX3	1938 aa		12.78	□□□□□ -0.36
NEPRO-222	ENST00000494891	ZBTB7B	O15156	539 aa	Predicted RBP	12.77	□□□□□ -0.37
NEPRO-222	ENST00000494891	AOC2	O75106	756 aa		12.77	□□□□□ -0.37
NEPRO-222	ENST00000494891	SPDYE2	Q495Y8	402 aa		12.77	□□□□□ -0.37
NEPRO-222	ENST00000494891	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	12.77	□□□□□ -0.37
NEPRO-222	ENST00000494891	WDR66	Q8TBY9	1149 aa		12.77	□□□□□ -0.37
NEPRO-222	ENST00000494891	CLUAP1	Q96AJ1	413 aa		12.77	□□□□□ -0.37
NEPRO-222	ENST00000494891	SIL1	Q9H173	461 aa		12.77	□□□□□ -0.37
NEPRO-222	ENST00000494891	PA2G4	Q9UQ80	394 aa	Known RBP	12.77	□□□□□ -0.37
NEPRO-222	ENST00000494891	AKAP2	Q9Y2D5	859 aa		12.77	□□□□□ -0.37
NEPRO-222	ENST00000494891	HSPA8	P11142	646 aa	Known RBP	12.76	□□□□□ -0.37
NEPRO-222	ENST00000494891	CRK	P46108	304 aa		12.76	□□□□□ -0.37
NEPRO-222	ENST00000494891	ZNF157	P51786	506 aa	Predicted RBP	12.76	□□□□□ -0.37
NEPRO-222	ENST00000494891	TNFAIP1	Q13829	316 aa		12.76	□□□□□ -0.37
NEPRO-222	ENST00000494891	POLA2	Q14181	598 aa		12.76	□□□□□ -0.37
NEPRO-222	ENST00000494891	LDLRAD1	Q5T700	205 aa		12.76	□□□□□ -0.37
NEPRO-222	ENST00000494891	FKBP1C	Q5VVH2	108 aa		12.76	□□□□□ -0.37
NEPRO-222	ENST00000494891	HHIPL2	Q6UWX4	724 aa		12.76	□□□□□ -0.37
NEPRO-222	ENST00000494891	SSH3	Q8TE77	659 aa		12.76	□□□□□ -0.37
NEPRO-222	ENST00000494891	ZDHHC15	Q96MV8	337 aa		12.76	□□□□□ -0.37
NEPRO-222	ENST00000494891	BEGAIN	Q9BUH8	593 aa		12.76	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms