RNA–Protein interactions for RNA: ENST00000494872.5

TRIM2-209, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 2,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-209ENST00000494872 DDX46Q7L014 1031 aaKnown RBP13.84□□□□□ -0.19
TRIM2-209ENST00000494872 NBPF15Q8N660 670 aa13.84□□□□□ -0.19
TRIM2-209ENST00000494872 NDUFB9Q9Y6M9 179 aa13.84□□□□□ -0.19
TRIM2-209ENST00000494872 PARP4Q9UKK3 1724 aaKnown RBP13.84□□□□□ -0.19
TRIM2-209ENST00000494872 PSDA5PKW4 1024 aaPredicted RBP13.84□□□□□ -0.19
TRIM2-209ENST00000494872 PDIA3P30101 505 aaKnown RBP13.84□□□□□ -0.19
TRIM2-209ENST00000494872 FAM193AP78312 1265 aa13.84□□□□□ -0.19
TRIM2-209ENST00000494872 KMT5BQ4FZB7 885 aa13.84□□□□□ -0.19
TRIM2-209ENST00000494872 ZMYM1Q5SVZ6 1142 aa13.84□□□□□ -0.19
TRIM2-209ENST00000494872 ILDR1Q86SU0 546 aaPredicted RBP13.84□□□□□ -0.19
TRIM2-209ENST00000494872 NBPF11Q86T75 865 aa13.84□□□□□ -0.19
TRIM2-209ENST00000494872 PCDHA7Q9UN72 937 aa13.84□□□□□ -0.19
TRIM2-209ENST00000494872 GLI3P10071 1580 aa13.84□□□□□ -0.19
TRIM2-209ENST00000494872 CARMIL3Q8ND23 1372 aa13.84□□□□□ -0.19
TRIM2-209ENST00000494872 NRDCO43847 1150 aa13.83□□□□□ -0.2
TRIM2-209ENST00000494872 IL15P40933 162 aaPredicted RBP13.83□□□□□ -0.2
TRIM2-209ENST00000494872 EVCP57679 992 aa13.83□□□□□ -0.2
TRIM2-209ENST00000494872 TPM4P67936 248 aa13.83□□□□□ -0.2
TRIM2-209ENST00000494872 ZRSR1Q15695 479 aaKnown RBP13.83□□□□□ -0.2
TRIM2-209ENST00000494872 ZNF771Q7L3S4 317 aaPredicted RBP13.83□□□□□ -0.2
TRIM2-209ENST00000494872 ATG9AQ7Z3C6 839 aa13.83□□□□□ -0.2
TRIM2-209ENST00000494872 KCNG4Q8TDN1 519 aa13.83□□□□□ -0.2
TRIM2-209ENST00000494872 SDF4Q9BRK5 362 aa13.83□□□□□ -0.2
TRIM2-209ENST00000494872 KIAA1468Q9P260 1216 aa13.83□□□□□ -0.2
TRIM2-209ENST00000494872 ERVV-2B6SEH9 535 aa13.83□□□□□ -0.2
TRIM2-209ENST00000494872 E7EWF7 191 aa13.83□□□□□ -0.2
TRIM2-209ENST00000494872 YEATS4O95619 227 aa13.83□□□□□ -0.2
TRIM2-209ENST00000494872 ZCRB1Q8TBF4 217 aaKnown RBP13.83□□□□□ -0.2
TRIM2-209ENST00000494872 NEUROD6Q96NK8 337 aa13.83□□□□□ -0.2
TRIM2-209ENST00000494872 L2HGDHQ9H9P8 463 aa13.83□□□□□ -0.2
TRIM2-209ENST00000494872 PAG1Q9NWQ8 432 aa13.83□□□□□ -0.2
TRIM2-209ENST00000494872 TRMT1Q9NXH9 659 aaKnown RBP13.83□□□□□ -0.2
TRIM2-209ENST00000494872 PCDH11XQ9BZA7 1347 aa13.82□□□□□ -0.2
TRIM2-209ENST00000494872 PCDH11YQ9BZA8 1340 aa13.82□□□□□ -0.2
TRIM2-209ENST00000494872 CHGBP05060 677 aa13.82□□□□□ -0.2
TRIM2-209ENST00000494872 SLFN14P0C7P3 912 aa13.82□□□□□ -0.2
TRIM2-209ENST00000494872 FOSBP53539 338 aa13.82□□□□□ -0.2
TRIM2-209ENST00000494872 CCT2P78371 535 aaKnown RBP13.82□□□□□ -0.2
TRIM2-209ENST00000494872 TTLL7Q6ZT98 887 aa13.82□□□□□ -0.2
TRIM2-209ENST00000494872 LINC00301Q8NCQ3 95 aa13.82□□□□□ -0.2
TRIM2-209ENST00000494872 RGS22Q8NE09 1264 aa13.82□□□□□ -0.2
TRIM2-209ENST00000494872 POLR3EQ9NVU0 708 aa13.82□□□□□ -0.2
TRIM2-209ENST00000494872 HSPD1P10809 573 aaKnown RBP13.82□□□□□ -0.2
TRIM2-209ENST00000494872 CCDC191Q8NCU4 936 aa13.82□□□□□ -0.2
TRIM2-209ENST00000494872 SPEF2Q9C093 1822 aa13.81□□□□□ -0.2
TRIM2-209ENST00000494872 GOLIM4O00461 696 aa13.81□□□□□ -0.2
TRIM2-209ENST00000494872 CCP110O43303 1012 aa13.81□□□□□ -0.2
TRIM2-209ENST00000494872 ELF2Q15723 593 aa13.81□□□□□ -0.2
TRIM2-209ENST00000494872 E4F1Q66K89 784 aaPredicted RBP13.81□□□□□ -0.2
TRIM2-209ENST00000494872 FBXO38Q6PIJ6 1188 aa13.81□□□□□ -0.2
TRIM2-209ENST00000494872 CREBRFQ8IUR6 639 aa13.81□□□□□ -0.2
TRIM2-209ENST00000494872 NCOA5Q9HCD5 579 aaKnown RBP13.81□□□□□ -0.2
TRIM2-209ENST00000494872 ATG3Q9NT62 314 aa13.81□□□□□ -0.2
TRIM2-209ENST00000494872 EYA2O00167 538 aa13.8□□□□□ -0.2
TRIM2-209ENST00000494872 CIAO1O76071 339 aa13.8□□□□□ -0.2
TRIM2-209ENST00000494872 SFPQP23246 707 aaKnown RBP eCLIP13.8□□□□□ -0.2
TRIM2-209ENST00000494872 STK38Q15208 465 aa13.8□□□□□ -0.2
TRIM2-209ENST00000494872 TERF2Q15554 542 aa13.8□□□□□ -0.2
TRIM2-209ENST00000494872 BRAPQ7Z569 592 aa13.8□□□□□ -0.2
TRIM2-209ENST00000494872 WDR17Q8IZU2 1322 aa13.8□□□□□ -0.2
TRIM2-209ENST00000494872 A0A1B0GVL5 298 aa13.8□□□□□ -0.2
TRIM2-209ENST00000494872 KDM4FA0A1W2PPD8 638 aa13.8□□□□□ -0.2
TRIM2-209ENST00000494872 DHX16O60231 1041 aaKnown RBP13.8□□□□□ -0.2
TRIM2-209ENST00000494872 FDPSP14324 419 aaKnown RBP13.8□□□□□ -0.2
TRIM2-209ENST00000494872 NDUFA8P51970 172 aa13.8□□□□□ -0.2
TRIM2-209ENST00000494872 NLRP12P59046 1061 aa13.8□□□□□ -0.2
TRIM2-209ENST00000494872 TIMM10P62072 90 aa13.8□□□□□ -0.2
TRIM2-209ENST00000494872 NKX1-1Q15270 411 aaPredicted RBP13.8□□□□□ -0.2
TRIM2-209ENST00000494872 SF3A1Q15459 793 aaKnown RBP13.8□□□□□ -0.2
TRIM2-209ENST00000494872 PPP1R13BQ96KQ4 1090 aa13.8□□□□□ -0.2
TRIM2-209ENST00000494872 XPO4Q9C0E2 1151 aaKnown RBP13.8□□□□□ -0.2
TRIM2-209ENST00000494872 CCDC9Q9Y3X0 531 aaKnown RBP13.8□□□□□ -0.2
TRIM2-209ENST00000494872 RNF113AO15541 343 aaKnown RBP13.79□□□□□ -0.2
TRIM2-209ENST00000494872 A1BGP04217 495 aa13.79□□□□□ -0.2
TRIM2-209ENST00000494872 GUCY1B3Q02153 619 aa13.79□□□□□ -0.2
TRIM2-209ENST00000494872 DPCR1Q3MIW9 517 aa13.79□□□□□ -0.2
TRIM2-209ENST00000494872 CCDC93Q567U6 631 aa13.79□□□□□ -0.2
TRIM2-209ENST00000494872 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.79□□□□□ -0.2
TRIM2-209ENST00000494872 STRCP1A6NGW2 1772 aa13.79□□□□□ -0.2
TRIM2-209ENST00000494872 A0A087WWV3 80 aa13.79□□□□□ -0.2
TRIM2-209ENST00000494872 IKBKBO14920 756 aa13.79□□□□□ -0.2
TRIM2-209ENST00000494872 SPTLC2O15270 562 aa13.79□□□□□ -0.2
TRIM2-209ENST00000494872 IGSF3O75054 1194 aa13.79□□□□□ -0.2
TRIM2-209ENST00000494872 SMC2O95347 1197 aa13.79□□□□□ -0.2
TRIM2-209ENST00000494872 SLC3A2P08195 630 aaKnown RBP13.79□□□□□ -0.2
TRIM2-209ENST00000494872 IFIT1P09914 478 aaKnown RBP13.79□□□□□ -0.2
TRIM2-209ENST00000494872 LRRFIP1Q32MZ4 808 aaKnown RBP13.79□□□□□ -0.2
TRIM2-209ENST00000494872 ARMCX5Q6P1M9 558 aa13.79□□□□□ -0.2
TRIM2-209ENST00000494872 TOM1L2Q6ZVM7 507 aa13.79□□□□□ -0.2
TRIM2-209ENST00000494872 TMC6Q7Z403 805 aa13.79□□□□□ -0.2
TRIM2-209ENST00000494872 C8orf76Q96K31 380 aa13.79□□□□□ -0.2
TRIM2-209ENST00000494872 IFNKQ9P0W0 207 aa13.79□□□□□ -0.2
TRIM2-209ENST00000494872 NAP1L2Q9ULW6 460 aaPredicted RBP13.79□□□□□ -0.2
TRIM2-209ENST00000494872 NUP188Q5SRE5 1749 aa13.79□□□□□ -0.2
TRIM2-209ENST00000494872 MAST3O60307 1309 aa13.79□□□□□ -0.2
TRIM2-209ENST00000494872 NEDD4P46934 1319 aa13.79□□□□□ -0.2
TRIM2-209ENST00000494872 H2AFXP16104 143 aaPredicted RBP13.78□□□□□ -0.2
TRIM2-209ENST00000494872 BMS1Q14692 1282 aaKnown RBP13.78□□□□□ -0.2
TRIM2-209ENST00000494872 LRRC24Q50LG9 513 aa13.78□□□□□ -0.2
TRIM2-209ENST00000494872 ZBTB3Q9H5J0 574 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms