RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 FRAT2O75474 233 aaPredicted RBP27.26■■□□□ 1.95
HPS3-207ENST00000494327 CIAO1O76071 339 aa27.26■■□□□ 1.95
HPS3-207ENST00000494327 FBXO33Q7Z6M2 555 aa27.26■■□□□ 1.95
HPS3-207ENST00000494327 IL15P40933 162 aaPredicted RBP27.25■■□□□ 1.95
HPS3-207ENST00000494327 BCAMP50895 628 aa27.25■■□□□ 1.95
HPS3-207ENST00000494327 DEFB115Q30KQ5 88 aa27.25■■□□□ 1.95
HPS3-207ENST00000494327 NBPF9Q3BBW0 867 aa27.25■■□□□ 1.95
HPS3-207ENST00000494327 SULF1Q8IWU6 871 aa27.25■■□□□ 1.95
HPS3-207ENST00000494327 COPRSQ9NQ92 184 aa27.25■■□□□ 1.95
HPS3-207ENST00000494327 SLC5A1P13866 664 aa27.24■■□□□ 1.95
HPS3-207ENST00000494327 FGFR2P21802 821 aa27.24■■□□□ 1.95
HPS3-207ENST00000494327 MTX1Q13505 466 aa27.24■■□□□ 1.95
HPS3-207ENST00000494327 JMYQ8N9B5 988 aa27.24■■□□□ 1.95
HPS3-207ENST00000494327 CNTNAP1P78357 1384 aa27.23■■□□□ 1.95
HPS3-207ENST00000494327 CHAF1AQ13111 956 aaPredicted RBP27.23■■□□□ 1.95
HPS3-207ENST00000494327 PANK1Q8TE04 598 aa27.23■■□□□ 1.95
HPS3-207ENST00000494327 LPIN2Q92539 896 aa27.23■■□□□ 1.95
HPS3-207ENST00000494327 RCAN3Q9UKA8 241 aa27.23■■□□□ 1.95
HPS3-207ENST00000494327 SCAF8Q9UPN6 1271 aaKnown RBP27.23■■□□□ 1.95
HPS3-207ENST00000494327 FAM205AQ6ZU69 1335 aa27.22■■□□□ 1.95
HPS3-207ENST00000494327 WNT10BO00744 389 aa27.22■■□□□ 1.95
HPS3-207ENST00000494327 MMP14P50281 582 aa27.22■■□□□ 1.95
HPS3-207ENST00000494327 FKBP1AP62942 108 aaKnown RBP27.22■■□□□ 1.95
HPS3-207ENST00000494327 ATP2B3Q16720 1220 aa27.22■■□□□ 1.95
HPS3-207ENST00000494327 MFSD14BQ5SR56 506 aa27.22■■□□□ 1.95
HPS3-207ENST00000494327 PAXIP1Q6ZW49 1069 aaPredicted RBP27.22■■□□□ 1.95
HPS3-207ENST00000494327 C1orf115Q9H7X2 142 aa27.22■■□□□ 1.95
HPS3-207ENST00000494327 ZNF646O15015 1829 aaPredicted RBP27.22■■□□□ 1.95
HPS3-207ENST00000494327 PNMA6EA0A0J9YXQ4 647 aa27.21■■□□□ 1.95
HPS3-207ENST00000494327 RASSF10A6NK89 507 aa27.2■■□□□ 1.94
HPS3-207ENST00000494327 ZBTB7BO15156 539 aaPredicted RBP27.2■■□□□ 1.94
HPS3-207ENST00000494327 VEGFBP49765 207 aa27.2■■□□□ 1.94
HPS3-207ENST00000494327 DLGAP5Q15398 846 aa27.2■■□□□ 1.94
HPS3-207ENST00000494327 TLL2Q9Y6L7 1015 aa27.19■■□□□ 1.94
HPS3-207ENST00000494327 MS4A1P11836 297 aa27.18■■□□□ 1.94
HPS3-207ENST00000494327 RBM5P52756 815 aaKnown RBP eCLIP27.18■■□□□ 1.94
HPS3-207ENST00000494327 GRM1Q13255 1194 aa27.18■■□□□ 1.94
HPS3-207ENST00000494327 TFCP2Q12800 502 aa27.17■■□□□ 1.94
HPS3-207ENST00000494327 CFAP100Q494V2 611 aa27.17■■□□□ 1.94
HPS3-207ENST00000494327 CDCA5Q96FF9 252 aa27.17■■□□□ 1.94
HPS3-207ENST00000494327 PCDHAC2Q9Y5I4 1007 aa27.17■■□□□ 1.94
HPS3-207ENST00000494327 PITPNM2Q9BZ72 1349 aa27.16■■□□□ 1.94
HPS3-207ENST00000494327 G3BP1Q13283 466 aaKnown RBP eCLIP27.16■■□□□ 1.94
HPS3-207ENST00000494327 YTHDC1Q96MU7 727 aaKnown RBP27.16■■□□□ 1.94
HPS3-207ENST00000494327 TTF2Q9UNY4 1162 aaKnown RBP27.16■■□□□ 1.94
HPS3-207ENST00000494327 TRPM7Q96QT4 1865 aa27.16■■□□□ 1.94
HPS3-207ENST00000494327 ATP8B2P98198 1209 aa27.15■■□□□ 1.94
HPS3-207ENST00000494327 PRAMEF18Q5VWM3 479 aa27.15■■□□□ 1.94
HPS3-207ENST00000494327 CYP4F22Q6NT55 531 aa27.15■■□□□ 1.94
HPS3-207ENST00000494327 SAPCD2Q86UD0 394 aa27.15■■□□□ 1.94
HPS3-207ENST00000494327 ZBED3Q96IU2 234 aaPredicted RBP27.15■■□□□ 1.94
HPS3-207ENST00000494327 POLR2AP24928 1970 aaKnown RBP27.15■■□□□ 1.94
HPS3-207ENST00000494327 TIMM10P62072 90 aa27.14■■□□□ 1.94
HPS3-207ENST00000494327 C2orf69Q8N8R5 385 aa27.14■■□□□ 1.94
HPS3-207ENST00000494327 TBC1D22AQ8WUA7 517 aa27.14■■□□□ 1.94
HPS3-207ENST00000494327 GBA2Q9HCG7 927 aaPredicted RBP27.14■■□□□ 1.94
HPS3-207ENST00000494327 WDR33Q9C0J8 1336 aaKnown RBP27.14■■□□□ 1.93
HPS3-207ENST00000494327 ADORA1P30542 326 aa27.13■■□□□ 1.93
HPS3-207ENST00000494327 GRIK5Q16478 980 aa27.13■■□□□ 1.93
HPS3-207ENST00000494327 GNL3LQ9NVN8 582 aaKnown RBP27.13■■□□□ 1.93
HPS3-207ENST00000494327 AKAP2Q9Y2D5 859 aa27.13■■□□□ 1.93
HPS3-207ENST00000494327 MTMR14Q8NCE2 650 aa27.12■■□□□ 1.93
HPS3-207ENST00000494327 CAPNS2Q96L46 248 aa27.12■■□□□ 1.93
HPS3-207ENST00000494327 PRMT6Q96LA8 375 aaPredicted RBP27.12■■□□□ 1.93
HPS3-207ENST00000494327 COG6Q9Y2V7 657 aa27.12■■□□□ 1.93
HPS3-207ENST00000494327 CLRN2A0PK11 232 aa27.11■■□□□ 1.93
HPS3-207ENST00000494327 MYO1BO43795 1136 aa27.11■■□□□ 1.93
HPS3-207ENST00000494327 ECE1P42892 770 aa27.11■■□□□ 1.93
HPS3-207ENST00000494327 PHKA1P46020 1223 aa27.11■■□□□ 1.93
HPS3-207ENST00000494327 HUNKP57058 714 aa27.11■■□□□ 1.93
HPS3-207ENST00000494327 POLA2Q14181 598 aa27.11■■□□□ 1.93
HPS3-207ENST00000494327 SSH3Q8TE77 659 aa27.11■■□□□ 1.93
HPS3-207ENST00000494327 NEUROD6Q96NK8 337 aa27.11■■□□□ 1.93
HPS3-207ENST00000494327 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.11■■□□□ 1.93
HPS3-207ENST00000494327 A0A1B0GUL7 405 aa27.1■■□□□ 1.93
HPS3-207ENST00000494327 SPDYE2BA6NHP3 402 aa27.1■■□□□ 1.93
HPS3-207ENST00000494327 SPDYE6P0CI01 402 aa27.1■■□□□ 1.93
HPS3-207ENST00000494327 HSPA1AP0DMV8 641 aaKnown RBP27.1■■□□□ 1.93
HPS3-207ENST00000494327 HSPA1BP0DMV9 641 aaKnown RBP27.1■■□□□ 1.93
HPS3-207ENST00000494327 OS9Q13438 667 aaPredicted RBP27.1■■□□□ 1.93
HPS3-207ENST00000494327 MVPQ14764 893 aaKnown RBP27.1■■□□□ 1.93
HPS3-207ENST00000494327 APOBEC3FQ8IUX4 373 aaKnown RBP27.1■■□□□ 1.93
HPS3-207ENST00000494327 SERPINA10Q9UK55 444 aa27.1■■□□□ 1.93
HPS3-207ENST00000494327 SURF6O75683 361 aaKnown RBP27.09■■□□□ 1.93
HPS3-207ENST00000494327 VEZTQ9HBM0 779 aa27.09■■□□□ 1.93
HPS3-207ENST00000494327 CRKP46108 304 aa27.08■■□□□ 1.93
HPS3-207ENST00000494327 CCDC102BQ68D86 513 aa27.08■■□□□ 1.93
HPS3-207ENST00000494327 WDR66Q8TBY9 1149 aa27.08■■□□□ 1.93
HPS3-207ENST00000494327 XAGE2Q96GT9 111 aa27.08■■□□□ 1.93
HPS3-207ENST00000494327 AOX1Q06278 1338 aa27.08■■□□□ 1.93
HPS3-207ENST00000494327 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.07■■□□□ 1.92
HPS3-207ENST00000494327 HHIPL1Q96JK4 782 aa27.07■■□□□ 1.92
HPS3-207ENST00000494327 CEP85Q6P2H3 762 aa27.06■■□□□ 1.92
HPS3-207ENST00000494327 TDRD3Q9H7E2 651 aaKnown RBP27.06■■□□□ 1.92
HPS3-207ENST00000494327 DENND2AQ9ULE3 1009 aa27.06■■□□□ 1.92
HPS3-207ENST00000494327 DDX19BQ9UMR2 479 aa27.06■■□□□ 1.92
HPS3-207ENST00000494327 AOC2O75106 756 aa27.05■■□□□ 1.92
HPS3-207ENST00000494327 NF2P35240 595 aa27.05■■□□□ 1.92
HPS3-207ENST00000494327 TTLL12Q14166 644 aaPredicted RBP27.05■■□□□ 1.92
HPS3-207ENST00000494327 GORABQ5T7V8 394 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms