RNA–Protein interactions for RNA: ENST00000494187.1

MINDY4-203, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 3,573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-203ENST00000494187 CCDC192P0DO97 292 aa10.87□□□□□ -0.67
MINDY4-203ENST00000494187 MAP3K11Q16584 847 aa10.87□□□□□ -0.67
MINDY4-203ENST00000494187 PTPN21Q16825 1174 aa10.87□□□□□ -0.67
MINDY4-203ENST00000494187 FAM177A1Q8N128 213 aaPredicted RBP10.87□□□□□ -0.67
MINDY4-203ENST00000494187 ZBTB38Q8NAP3 1195 aaPredicted RBP10.87□□□□□ -0.67
MINDY4-203ENST00000494187 TTLL11Q8NHH1 800 aa10.87□□□□□ -0.67
MINDY4-203ENST00000494187 NCOA7Q8NI08 942 aa10.87□□□□□ -0.67
MINDY4-203ENST00000494187 AK7Q96M32 723 aa10.87□□□□□ -0.67
MINDY4-203ENST00000494187 HAUS7Q99871 368 aa10.87□□□□□ -0.67
MINDY4-203ENST00000494187 GNL3LQ9NVN8 582 aaKnown RBP10.87□□□□□ -0.67
MINDY4-203ENST00000494187 ZNF652Q9Y2D9 606 aa10.87□□□□□ -0.67
MINDY4-203ENST00000494187 SLC12A7Q9Y666 1083 aa10.87□□□□□ -0.67
MINDY4-203ENST00000494187 MAST3O60307 1309 aa10.87□□□□□ -0.67
MINDY4-203ENST00000494187 H7C1W4 665 aa10.87□□□□□ -0.67
MINDY4-203ENST00000494187 MCM5P33992 734 aa10.87□□□□□ -0.67
MINDY4-203ENST00000494187 METAP2P50579 478 aaKnown RBP eCLIP10.87□□□□□ -0.67
MINDY4-203ENST00000494187 CCDC173Q0VFZ6 552 aa10.87□□□□□ -0.67
MINDY4-203ENST00000494187 NECTIN1Q15223 517 aa10.87□□□□□ -0.67
MINDY4-203ENST00000494187 CCDC183Q5T5S1 534 aa10.87□□□□□ -0.67
MINDY4-203ENST00000494187 LRSAM1Q6UWE0 723 aa10.87□□□□□ -0.67
MINDY4-203ENST00000494187 DZIP1Q86YF9 867 aaKnown RBP10.87□□□□□ -0.67
MINDY4-203ENST00000494187 MTMR6Q9Y217 621 aa10.87□□□□□ -0.67
MINDY4-203ENST00000494187 MAP3K15Q6ZN16 1313 aa10.87□□□□□ -0.67
MINDY4-203ENST00000494187 PDE8AO60658 829 aa10.86□□□□□ -0.67
MINDY4-203ENST00000494187 USP5P45974 858 aa10.86□□□□□ -0.67
MINDY4-203ENST00000494187 SART3Q15020 963 aaKnown RBP10.86□□□□□ -0.67
MINDY4-203ENST00000494187 SAFBQ15424 915 aaKnown RBP eCLIP10.86□□□□□ -0.67
MINDY4-203ENST00000494187 MSL1Q68DK7 614 aa10.86□□□□□ -0.67
MINDY4-203ENST00000494187 CCAR1Q8IX12 1150 aaKnown RBP10.86□□□□□ -0.67
MINDY4-203ENST00000494187 STX8Q9UNK0 236 aa10.86□□□□□ -0.67
MINDY4-203ENST00000494187 UBE2HP62256 183 aa10.86□□□□□ -0.67
MINDY4-203ENST00000494187 KLHL10Q6JEL2 608 aa10.86□□□□□ -0.67
MINDY4-203ENST00000494187 MFSD6Q6ZSS7 791 aa10.86□□□□□ -0.67
MINDY4-203ENST00000494187 ATG9AQ7Z3C6 839 aa10.86□□□□□ -0.67
MINDY4-203ENST00000494187 TTC6Q86TZ1 520 aa10.86□□□□□ -0.67
MINDY4-203ENST00000494187 NLRP3Q96P20 1036 aa10.86□□□□□ -0.67
MINDY4-203ENST00000494187 NOL10Q9BSC4 688 aaKnown RBP10.86□□□□□ -0.67
MINDY4-203ENST00000494187 TMX4Q9H1E5 349 aaPredicted RBP10.86□□□□□ -0.67
MINDY4-203ENST00000494187 ZSWIM6Q9HCJ5 1215 aa10.86□□□□□ -0.67
MINDY4-203ENST00000494187 USP21Q9UK80 565 aa10.86□□□□□ -0.67
MINDY4-203ENST00000494187 TNS3Q68CZ2 1445 aa10.86□□□□□ -0.67
MINDY4-203ENST00000494187 C3P01024 1663 aa10.86□□□□□ -0.67
MINDY4-203ENST00000494187 DLG5Q8TDM6 1919 aa10.86□□□□□ -0.67
MINDY4-203ENST00000494187 MCAMP43121 646 aa10.86□□□□□ -0.67
MINDY4-203ENST00000494187 SCRN1Q12765 414 aa10.86□□□□□ -0.67
MINDY4-203ENST00000494187 AATFQ9NY61 560 aaKnown RBP eCLIP10.86□□□□□ -0.67
MINDY4-203ENST00000494187 KDM6AO15550 1401 aaPredicted RBP10.86□□□□□ -0.67
MINDY4-203ENST00000494187 ERFEQ4G0M1 354 aa10.85□□□□□ -0.67
MINDY4-203ENST00000494187 HOMER1Q86YM7 354 aa10.85□□□□□ -0.67
MINDY4-203ENST00000494187 RNF216Q9NWF9 866 aaPredicted RBP10.85□□□□□ -0.67
MINDY4-203ENST00000494187 SAP30BPQ9UHR5 308 aaKnown RBP10.85□□□□□ -0.67
MINDY4-203ENST00000494187 CDK11BP21127 795 aaKnown RBP10.85□□□□□ -0.67
MINDY4-203ENST00000494187 ANO6Q4KMQ2 910 aa10.85□□□□□ -0.67
MINDY4-203ENST00000494187 ZSCAN25Q6NSZ9 544 aa10.85□□□□□ -0.67
MINDY4-203ENST00000494187 TRMT1LQ7Z2T5 733 aaKnown RBP10.85□□□□□ -0.67
MINDY4-203ENST00000494187 ALG1Q9BT22 464 aa10.85□□□□□ -0.67
MINDY4-203ENST00000494187 TMX1Q9H3N1 280 aa10.85□□□□□ -0.67
MINDY4-203ENST00000494187 PIH1D3Q9NQM4 214 aaKnown RBP10.85□□□□□ -0.67
MINDY4-203ENST00000494187 KCNJ14Q9UNX9 436 aa10.85□□□□□ -0.67
MINDY4-203ENST00000494187 PEAK1Q9H792 1746 aa10.85□□□□□ -0.67
MINDY4-203ENST00000494187 MARCH6O60337 910 aa10.85□□□□□ -0.67
MINDY4-203ENST00000494187 IARSP41252 1262 aaKnown RBP10.85□□□□□ -0.67
MINDY4-203ENST00000494187 STOX1Q6ZVD7 989 aa10.85□□□□□ -0.67
MINDY4-203ENST00000494187 INTS4Q96HW7 963 aaKnown RBP10.85□□□□□ -0.67
MINDY4-203ENST00000494187 ZFP91Q96JP5 570 aaPredicted RBP10.85□□□□□ -0.67
MINDY4-203ENST00000494187 CDC5LQ99459 802 aaKnown RBP10.85□□□□□ -0.67
MINDY4-203ENST00000494187 HMG20BQ9P0W2 317 aa10.85□□□□□ -0.67
MINDY4-203ENST00000494187 EIF6P56537 245 aaKnown RBP10.84□□□□□ -0.67
MINDY4-203ENST00000494187 PICALMQ13492 652 aa10.84□□□□□ -0.67
MINDY4-203ENST00000494187 FAM47AQ5JRC9 791 aa10.84□□□□□ -0.67
MINDY4-203ENST00000494187 ZSCAN29Q8IWY8 852 aaPredicted RBP10.84□□□□□ -0.67
MINDY4-203ENST00000494187 PDE8BO95263 885 aa10.84□□□□□ -0.67
MINDY4-203ENST00000494187 SPATA5Q8NB90 893 aa10.84□□□□□ -0.67
MINDY4-203ENST00000494187 ZNF622Q969S3 477 aaKnown RBP eCLIP10.84□□□□□ -0.67
MINDY4-203ENST00000494187 TRMT1Q9NXH9 659 aaKnown RBP10.84□□□□□ -0.67
MINDY4-203ENST00000494187 RTCBQ9Y3I0 505 aaKnown RBP10.84□□□□□ -0.67
MINDY4-203ENST00000494187 PCCAP05165 728 aaPredicted RBP10.83□□□□□ -0.67
MINDY4-203ENST00000494187 CYP19A1P11511 503 aaPredicted RBP10.83□□□□□ -0.67
MINDY4-203ENST00000494187 ZNF165P49910 485 aa10.83□□□□□ -0.67
MINDY4-203ENST00000494187 DYNLL1P63167 89 aaKnown RBP10.83□□□□□ -0.67
MINDY4-203ENST00000494187 MTX1Q13505 466 aa10.83□□□□□ -0.67
MINDY4-203ENST00000494187 UTP14CQ5TAP6 766 aaKnown RBP10.83□□□□□ -0.67
MINDY4-203ENST00000494187 NAA16Q6N069 864 aaPredicted RBP10.83□□□□□ -0.67
MINDY4-203ENST00000494187 SMAP1Q8IYB5 467 aaPredicted RBP10.83□□□□□ -0.67
MINDY4-203ENST00000494187 MARCH10Q8NA82 808 aaPredicted RBP10.83□□□□□ -0.67
MINDY4-203ENST00000494187 MKNK2Q9HBH9 465 aa10.83□□□□□ -0.67
MINDY4-203ENST00000494187 CFAP45Q9UL16 551 aa10.83□□□□□ -0.67
MINDY4-203ENST00000494187 ZBTB43O43298 467 aa10.83□□□□□ -0.68
MINDY4-203ENST00000494187 PDE6AP16499 860 aa10.83□□□□□ -0.68
MINDY4-203ENST00000494187 CHRNDQ07001 517 aa10.83□□□□□ -0.68
MINDY4-203ENST00000494187 IKQ13123 557 aaPredicted RBP10.83□□□□□ -0.68
MINDY4-203ENST00000494187 TRIM22Q8IYM9 498 aa10.83□□□□□ -0.68
MINDY4-203ENST00000494187 APPBP2Q92624 585 aa10.83□□□□□ -0.68
MINDY4-203ENST00000494187 ZNF396Q96N95 335 aaPredicted RBP10.83□□□□□ -0.68
MINDY4-203ENST00000494187 SCAND2PQ9GZW5 306 aaPredicted RBP10.83□□□□□ -0.68
MINDY4-203ENST00000494187 ARHGAP23Q9P227 1491 aa10.83□□□□□ -0.68
MINDY4-203ENST00000494187 UBE2Q2LH0YL09 131 aa10.83□□□□□ -0.68
MINDY4-203ENST00000494187 NR1I2O75469 434 aa10.83□□□□□ -0.68
MINDY4-203ENST00000494187 TOB2Q14106 344 aaPredicted RBP10.83□□□□□ -0.68
MINDY4-203ENST00000494187 TSC1Q92574 1164 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms