RNA–Protein interactions for RNA: ENST00000494019.5

RFC2-211, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-211ENST00000494019 MXD3Q9BW11 206 aa12.46□□□□□ -0.41
RFC2-211ENST00000494019 MYH7P12883 1935 aa12.46□□□□□ -0.42
RFC2-211ENST00000494019 TRPM7Q96QT4 1865 aa12.45□□□□□ -0.42
RFC2-211ENST00000494019 SHTN1A0MZ66 631 aa12.45□□□□□ -0.42
RFC2-211ENST00000494019 EPHX2P34913 555 aa12.45□□□□□ -0.42
RFC2-211ENST00000494019 EPS15P42566 896 aa12.45□□□□□ -0.42
RFC2-211ENST00000494019 PHKA1P46020 1223 aa12.45□□□□□ -0.42
RFC2-211ENST00000494019 CHAF1AQ13111 956 aaPredicted RBP12.45□□□□□ -0.42
RFC2-211ENST00000494019 GORABQ5T7V8 394 aa12.45□□□□□ -0.42
RFC2-211ENST00000494019 CCDC102BQ68D86 513 aa12.45□□□□□ -0.42
RFC2-211ENST00000494019 AGBL3Q8NEM8 1001 aa12.45□□□□□ -0.42
RFC2-211ENST00000494019 KIF1BPQ96EK5 621 aa12.45□□□□□ -0.42
RFC2-211ENST00000494019 BCL11AQ9H165 835 aa12.45□□□□□ -0.42
RFC2-211ENST00000494019 TAF1DQ9H5J8 278 aaPredicted RBP12.45□□□□□ -0.42
RFC2-211ENST00000494019 IL1RAPL2Q9NP60 686 aa12.45□□□□□ -0.42
RFC2-211ENST00000494019 GPR108Q9NPR9 543 aa12.45□□□□□ -0.42
RFC2-211ENST00000494019 GNL3LQ9NVN8 582 aaKnown RBP12.45□□□□□ -0.42
RFC2-211ENST00000494019 FAM205AQ6ZU69 1335 aa12.44□□□□□ -0.42
RFC2-211ENST00000494019 RAB11FIP3O75154 756 aa12.44□□□□□ -0.42
RFC2-211ENST00000494019 EAPPQ56P03 285 aaPredicted RBP12.44□□□□□ -0.42
RFC2-211ENST00000494019 AACSQ86V21 672 aa12.44□□□□□ -0.42
RFC2-211ENST00000494019 DPF2Q92785 391 aa12.44□□□□□ -0.42
RFC2-211ENST00000494019 TLR7Q9NYK1 1049 aaKnown RBP12.44□□□□□ -0.42
RFC2-211ENST00000494019 CNOT7Q9UIV1 285 aaKnown RBP12.44□□□□□ -0.42
RFC2-211ENST00000494019 H7C1D1 291 aa12.43□□□□□ -0.42
RFC2-211ENST00000494019 MFSD14BQ5SR56 506 aa12.43□□□□□ -0.42
RFC2-211ENST00000494019 KIAA0825Q8IV33 1275 aa12.43□□□□□ -0.42
RFC2-211ENST00000494019 CLASRPQ8N2M8 674 aaKnown RBP12.43□□□□□ -0.42
RFC2-211ENST00000494019 CERS5Q8N5B7 392 aa12.43□□□□□ -0.42
RFC2-211ENST00000494019 EAF2Q96CJ1 260 aaPredicted RBP12.43□□□□□ -0.42
RFC2-211ENST00000494019 GMLQ99445 158 aa12.43□□□□□ -0.42
RFC2-211ENST00000494019 DBNDD2Q9BQY9 259 aa12.43□□□□□ -0.42
RFC2-211ENST00000494019 CCDC8Q9H0W5 538 aaPredicted RBP12.43□□□□□ -0.42
RFC2-211ENST00000494019 ADARB2Q9NS39 739 aaKnown RBP12.43□□□□□ -0.42
RFC2-211ENST00000494019 F8W031 263 aaPredicted RBP12.42□□□□□ -0.42
RFC2-211ENST00000494019 SEMA3EO15041 775 aa12.42□□□□□ -0.42
RFC2-211ENST00000494019 TOMM70O94826 608 aa12.42□□□□□ -0.42
RFC2-211ENST00000494019 USP17L8P0C7I0 530 aa12.42□□□□□ -0.42
RFC2-211ENST00000494019 POTEIP0CG38 1075 aa12.42□□□□□ -0.42
RFC2-211ENST00000494019 POTEJP0CG39 1038 aa12.42□□□□□ -0.42
RFC2-211ENST00000494019 FKBP1AP62942 108 aaKnown RBP12.42□□□□□ -0.42
RFC2-211ENST00000494019 RASGRF1Q13972 1273 aa12.42□□□□□ -0.42
RFC2-211ENST00000494019 KIF4BQ2VIQ3 1234 aa12.42□□□□□ -0.42
RFC2-211ENST00000494019 TTC39AQ5SRH9 613 aa12.42□□□□□ -0.42
RFC2-211ENST00000494019 SAMD7Q7Z3H4 446 aa12.42□□□□□ -0.42
RFC2-211ENST00000494019 PNMA8AQ86V59 439 aaPredicted RBP12.42□□□□□ -0.42
RFC2-211ENST00000494019 TRPM4Q8TD43 1214 aa12.42□□□□□ -0.42
RFC2-211ENST00000494019 LRRCC1Q9C099 1032 aa12.42□□□□□ -0.42
RFC2-211ENST00000494019 DCTPP1Q9H773 170 aa12.42□□□□□ -0.42
RFC2-211ENST00000494019 DBNLQ9UJU6 430 aaKnown RBP12.42□□□□□ -0.42
RFC2-211ENST00000494019 DENND2AQ9ULE3 1009 aa12.42□□□□□ -0.42
RFC2-211ENST00000494019 AK9Q5TCS8 1911 aa12.41□□□□□ -0.42
RFC2-211ENST00000494019 SMARCA5O60264 1052 aaPredicted RBP12.41□□□□□ -0.42
RFC2-211ENST00000494019 ARID4AP29374 1257 aaPredicted RBP12.41□□□□□ -0.42
RFC2-211ENST00000494019 HDAC1Q13547 482 aaPredicted RBP12.41□□□□□ -0.42
RFC2-211ENST00000494019 TBC1D10BQ4KMP7 808 aaPredicted RBP12.41□□□□□ -0.42
RFC2-211ENST00000494019 CCDC158Q5M9N0 1113 aa12.41□□□□□ -0.42
RFC2-211ENST00000494019 RBM26Q5T8P6 1007 aaKnown RBP12.41□□□□□ -0.42
RFC2-211ENST00000494019 USP50Q70EL3 339 aaPredicted RBP12.41□□□□□ -0.42
RFC2-211ENST00000494019 OGFOD1Q8N543 542 aa12.41□□□□□ -0.42
RFC2-211ENST00000494019 TBC1D22AQ8WUA7 517 aa12.41□□□□□ -0.42
RFC2-211ENST00000494019 HDAC9Q9UKV0 1011 aa12.41□□□□□ -0.42
RFC2-211ENST00000494019 CDK5RAP2Q96SN8 1893 aa12.4□□□□□ -0.42
RFC2-211ENST00000494019 EGFRP00533 1210 aa12.4□□□□□ -0.42
RFC2-211ENST00000494019 IFIT2P09913 472 aaKnown RBP12.4□□□□□ -0.42
RFC2-211ENST00000494019 UQCRFS1P1P0C7P4 283 aa12.4□□□□□ -0.42
RFC2-211ENST00000494019 ZNF280AP59817 542 aaPredicted RBP12.4□□□□□ -0.42
RFC2-211ENST00000494019 PI16Q6UXB8 463 aa12.4□□□□□ -0.42
RFC2-211ENST00000494019 LDHDQ86WU2 507 aa12.4□□□□□ -0.42
RFC2-211ENST00000494019 RBM46Q8TBY0 533 aaKnown RBP12.4□□□□□ -0.42
RFC2-211ENST00000494019 WDR66Q8TBY9 1149 aa12.4□□□□□ -0.42
RFC2-211ENST00000494019 MYOZ2Q9NPC6 264 aa12.4□□□□□ -0.42
RFC2-211ENST00000494019 CLEC11AQ9Y240 323 aa12.4□□□□□ -0.42
RFC2-211ENST00000494019 PDS5AQ29RF7 1337 aaKnown RBP12.39□□□□□ -0.43
RFC2-211ENST00000494019 MCAMP43121 646 aa12.39□□□□□ -0.43
RFC2-211ENST00000494019 SCARF1Q14162 830 aa12.39□□□□□ -0.43
RFC2-211ENST00000494019 SPATA5Q8NB90 893 aa12.39□□□□□ -0.43
RFC2-211ENST00000494019 SMC1BQ8NDV3 1235 aa12.39□□□□□ -0.43
RFC2-211ENST00000494019 RWDD1Q9H446 243 aaPredicted RBP12.39□□□□□ -0.43
RFC2-211ENST00000494019 TTF2Q9UNY4 1162 aaKnown RBP12.39□□□□□ -0.43
RFC2-211ENST00000494019 MAST3O60307 1309 aa12.38□□□□□ -0.43
RFC2-211ENST00000494019 SALL1Q9NSC2 1324 aa12.38□□□□□ -0.43
RFC2-211ENST00000494019 ZBTB22O15209 634 aa12.38□□□□□ -0.43
RFC2-211ENST00000494019 PRDX5P30044 214 aa12.38□□□□□ -0.43
RFC2-211ENST00000494019 HIRAP54198 1017 aaPredicted RBP12.38□□□□□ -0.43
RFC2-211ENST00000494019 GRIK5Q16478 980 aa12.38□□□□□ -0.43
RFC2-211ENST00000494019 CHADLQ6NUI6 762 aa12.38□□□□□ -0.43
RFC2-211ENST00000494019 ZGPATQ8N5A5 531 aaKnown RBP12.38□□□□□ -0.43
RFC2-211ENST00000494019 GCC1Q96CN9 775 aa12.38□□□□□ -0.43
RFC2-211ENST00000494019 HMG20BQ9P0W2 317 aa12.38□□□□□ -0.43
RFC2-211ENST00000494019 ZBTB47Q9UFB7 747 aaPredicted RBP12.38□□□□□ -0.43
RFC2-211ENST00000494019 FOCADQ5VW36 1801 aa12.38□□□□□ -0.43
RFC2-211ENST00000494019 NEFLP07196 543 aa12.37□□□□□ -0.43
RFC2-211ENST00000494019 MMP14P50281 582 aa12.37□□□□□ -0.43
RFC2-211ENST00000494019 RBM5P52756 815 aaKnown RBP eCLIP12.37□□□□□ -0.43
RFC2-211ENST00000494019 MAP1SQ66K74 1059 aaPredicted RBP12.37□□□□□ -0.43
RFC2-211ENST00000494019 ZNF512BQ96KM6 892 aaPredicted RBP12.37□□□□□ -0.43
RFC2-211ENST00000494019 SNRKQ9NRH2 765 aa12.37□□□□□ -0.43
RFC2-211ENST00000494019 GGA3Q9NZ52 723 aa12.37□□□□□ -0.43
RFC2-211ENST00000494019 ABCF2Q9UG63 623 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms