RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 USP17L10C9JJH3 530 aa7.65□□□□□ -1.18
CPSF7-213ENST00000494016 USP17L13C9JLJ4 530 aa7.65□□□□□ -1.18
CPSF7-213ENST00000494016 USP17L12C9JPN9 530 aa7.65□□□□□ -1.18
CPSF7-213ENST00000494016 USP17L11C9JVI0 530 aa7.65□□□□□ -1.18
CPSF7-213ENST00000494016 USP17L21D6R901 530 aa7.65□□□□□ -1.18
CPSF7-213ENST00000494016 USP17L18D6R9N7 530 aa7.65□□□□□ -1.18
CPSF7-213ENST00000494016 USP17L22D6RA61 530 aa7.65□□□□□ -1.18
CPSF7-213ENST00000494016 USP17L17D6RBQ6 530 aa7.65□□□□□ -1.18
CPSF7-213ENST00000494016 USP17L19D6RCP7 530 aa7.65□□□□□ -1.18
CPSF7-213ENST00000494016 USP17L20D6RJB6 530 aa7.65□□□□□ -1.18
CPSF7-213ENST00000494016 PIK3C2AO00443 1686 aa7.65□□□□□ -1.18
CPSF7-213ENST00000494016 BACH1O14867 736 aa7.65□□□□□ -1.18
CPSF7-213ENST00000494016 RXRBP28702 533 aa7.65□□□□□ -1.18
CPSF7-213ENST00000494016 GNAI1P63096 354 aa7.65□□□□□ -1.18
CPSF7-213ENST00000494016 CALD1Q05682 793 aaKnown RBP7.65□□□□□ -1.18
CPSF7-213ENST00000494016 USP17L24Q0WX57 530 aa7.65□□□□□ -1.18
CPSF7-213ENST00000494016 MAP3K19Q56UN5 1328 aa7.65□□□□□ -1.18
CPSF7-213ENST00000494016 SLC27A3Q5K4L6 730 aa7.65□□□□□ -1.18
CPSF7-213ENST00000494016 MEX3CQ5U5Q3 659 aaKnown RBP7.65□□□□□ -1.18
CPSF7-213ENST00000494016 SULT6B1Q6IMI4 303 aa7.65□□□□□ -1.18
CPSF7-213ENST00000494016 BRINP3Q76B58 766 aa7.65□□□□□ -1.18
CPSF7-213ENST00000494016 DZIP1LQ8IYY4 767 aaKnown RBP7.65□□□□□ -1.18
CPSF7-213ENST00000494016 TSPYL6Q8N831 410 aa7.65□□□□□ -1.18
CPSF7-213ENST00000494016 IFT57Q9NWB7 429 aa7.65□□□□□ -1.18
CPSF7-213ENST00000494016 SERTAD1Q9UHV2 236 aa7.65□□□□□ -1.18
CPSF7-213ENST00000494016 C1orf167Q5SNV9 1468 aa7.64□□□□□ -1.19
CPSF7-213ENST00000494016 JCADQ9P266 1359 aa7.64□□□□□ -1.19
CPSF7-213ENST00000494016 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.64□□□□□ -1.19
CPSF7-213ENST00000494016 FAM83GA6ND36 823 aa7.64□□□□□ -1.19
CPSF7-213ENST00000494016 M0R2N6 131 aa7.64□□□□□ -1.19
CPSF7-213ENST00000494016 TRIM27P14373 513 aa7.64□□□□□ -1.19
CPSF7-213ENST00000494016 SMTNP53814 917 aa7.64□□□□□ -1.19
CPSF7-213ENST00000494016 DCTN1Q14203 1278 aa7.64□□□□□ -1.19
CPSF7-213ENST00000494016 MVPQ14764 893 aaKnown RBP7.64□□□□□ -1.19
CPSF7-213ENST00000494016 MTFR1Q15390 333 aa7.64□□□□□ -1.19
CPSF7-213ENST00000494016 TLR1Q15399 786 aa7.64□□□□□ -1.19
CPSF7-213ENST00000494016 ATF7IPQ6VMQ6 1270 aa7.64□□□□□ -1.19
CPSF7-213ENST00000494016 PRICKLE2Q7Z3G6 844 aa7.64□□□□□ -1.19
CPSF7-213ENST00000494016 C8orf58Q8NAV2 365 aa7.64□□□□□ -1.19
CPSF7-213ENST00000494016 IRF7Q92985 503 aa7.64□□□□□ -1.19
CPSF7-213ENST00000494016 PBXIP1Q96AQ6 731 aa7.64□□□□□ -1.19
CPSF7-213ENST00000494016 ZSCAN10Q96SZ4 725 aaPredicted RBP7.64□□□□□ -1.19
CPSF7-213ENST00000494016 MBIPQ9NS73 344 aa7.64□□□□□ -1.19
CPSF7-213ENST00000494016 SMC4Q9NTJ3 1288 aa7.64□□□□□ -1.19
CPSF7-213ENST00000494016 LAS1LQ9Y4W2 734 aaKnown RBP7.64□□□□□ -1.19
CPSF7-213ENST00000494016 USP54Q70EL1 1684 aa7.63□□□□□ -1.19
CPSF7-213ENST00000494016 SBNO1A3KN83 1393 aa7.63□□□□□ -1.19
CPSF7-213ENST00000494016 A6NJY4 79 aa7.63□□□□□ -1.19
CPSF7-213ENST00000494016 CHL1O00533 1208 aa7.63□□□□□ -1.19
CPSF7-213ENST00000494016 ATF3P18847 181 aa7.63□□□□□ -1.19
CPSF7-213ENST00000494016 LORP23490 312 aaPredicted RBP7.63□□□□□ -1.19
CPSF7-213ENST00000494016 LMOD3Q0VAK6 560 aa7.63□□□□□ -1.19
CPSF7-213ENST00000494016 ANKMY2Q8IV38 441 aa7.63□□□□□ -1.19
CPSF7-213ENST00000494016 DDX17Q92841 729 aaKnown RBP7.63□□□□□ -1.19
CPSF7-213ENST00000494016 ZNF428Q96B54 188 aa7.63□□□□□ -1.19
CPSF7-213ENST00000494016 ANP32EQ9BTT0 268 aa7.63□□□□□ -1.19
CPSF7-213ENST00000494016 C19orf44Q9H6X5 657 aa7.63□□□□□ -1.19
CPSF7-213ENST00000494016 SFI1A8K8P3 1242 aa7.62□□□□□ -1.19
CPSF7-213ENST00000494016 IPO8O15397 1037 aaKnown RBP7.62□□□□□ -1.19
CPSF7-213ENST00000494016 IGSF3O75054 1194 aa7.62□□□□□ -1.19
CPSF7-213ENST00000494016 VEGFBP49765 207 aa7.62□□□□□ -1.19
CPSF7-213ENST00000494016 EPHA4P54764 986 aa7.62□□□□□ -1.19
CPSF7-213ENST00000494016 SEC13P55735 322 aa7.62□□□□□ -1.19
CPSF7-213ENST00000494016 PTSQ03393 145 aa7.62□□□□□ -1.19
CPSF7-213ENST00000494016 POU4F2Q12837 409 aa7.62□□□□□ -1.19
CPSF7-213ENST00000494016 DPYDQ12882 1025 aa7.62□□□□□ -1.19
CPSF7-213ENST00000494016 MTHFSDQ2M296 383 aaKnown RBP7.62□□□□□ -1.19
CPSF7-213ENST00000494016 WDR44Q5JSH3 913 aa7.62□□□□□ -1.19
CPSF7-213ENST00000494016 NUTM2GQ5VZR2 741 aa7.62□□□□□ -1.19
CPSF7-213ENST00000494016 TMEM57Q8N5G2 664 aa7.62□□□□□ -1.19
CPSF7-213ENST00000494016 ARHGAP45Q92619 1136 aa7.62□□□□□ -1.19
CPSF7-213ENST00000494016 RWDD1Q9H446 243 aaPredicted RBP7.62□□□□□ -1.19
CPSF7-213ENST00000494016 IQSEC3Q9UPP2 1182 aaPredicted RBP7.62□□□□□ -1.19
CPSF7-213ENST00000494016 ARHGEF10O15013 1369 aa7.61□□□□□ -1.19
CPSF7-213ENST00000494016 FLT4P35916 1363 aa7.61□□□□□ -1.19
CPSF7-213ENST00000494016 IGSF1Q8N6C5 1336 aa7.61□□□□□ -1.19
CPSF7-213ENST00000494016 COL22A1Q8NFW1 1626 aaPredicted RBP7.61□□□□□ -1.19
CPSF7-213ENST00000494016 SLC35F4A4IF30 521 aa7.61□□□□□ -1.19
CPSF7-213ENST00000494016 ELL2O00472 640 aaPredicted RBP7.61□□□□□ -1.19
CPSF7-213ENST00000494016 CDK2AP1O14519 115 aa7.61□□□□□ -1.19
CPSF7-213ENST00000494016 FOXO3O43524 673 aa7.61□□□□□ -1.19
CPSF7-213ENST00000494016 ATG7O95352 703 aa7.61□□□□□ -1.19
CPSF7-213ENST00000494016 RHOQP17081 205 aa7.61□□□□□ -1.19
CPSF7-213ENST00000494016 HOXC9P31274 260 aa7.61□□□□□ -1.19
CPSF7-213ENST00000494016 AMPHP49418 695 aa7.61□□□□□ -1.19
CPSF7-213ENST00000494016 ELOAQ14241 798 aaKnown RBP7.61□□□□□ -1.19
CPSF7-213ENST00000494016 C8orf34Q49A92 452 aa7.61□□□□□ -1.19
CPSF7-213ENST00000494016 TMEM214Q6NUQ4 689 aaKnown RBP7.61□□□□□ -1.19
CPSF7-213ENST00000494016 NBPF10Q6P3W6 841 aaKnown RBP7.61□□□□□ -1.19
CPSF7-213ENST00000494016 TAS1R3Q7RTX0 852 aa7.61□□□□□ -1.19
CPSF7-213ENST00000494016 NBPF15Q8N660 670 aa7.61□□□□□ -1.19
CPSF7-213ENST00000494016 ABTB2Q8N961 1025 aa7.61□□□□□ -1.19
CPSF7-213ENST00000494016 IPO9Q96P70 1041 aaKnown RBP7.61□□□□□ -1.19
CPSF7-213ENST00000494016 ZBTB40Q9NUA8 1239 aa7.61□□□□□ -1.19
CPSF7-213ENST00000494016 SCHIP1Q9P0W5 487 aaPredicted RBP7.61□□□□□ -1.19
CPSF7-213ENST00000494016 CRB1P82279 1406 aa7.61□□□□□ -1.19
CPSF7-213ENST00000494016 KDRP35968 1356 aa7.6□□□□□ -1.19
CPSF7-213ENST00000494016 KIF24Q5T7B8 1368 aa7.6□□□□□ -1.19
CPSF7-213ENST00000494016 SPATA31A6Q5VVP1 1343 aa7.6□□□□□ -1.19
CPSF7-213ENST00000494016 GTF2E1P29083 439 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms