RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 ALDH3A1P30838 453 aa22.72■■□□□ 1.23
RNF40-203ENST00000493683 NBPF6Q5VWK0 638 aa22.72■■□□□ 1.23
RNF40-203ENST00000493683 CEP85Q6P2H3 762 aa22.72■■□□□ 1.23
RNF40-203ENST00000493683 COPS6Q7L5N1 327 aa22.72■■□□□ 1.23
RNF40-203ENST00000493683 NBPF5PQ86XG9 351 aaPredicted RBP22.72■■□□□ 1.23
RNF40-203ENST00000493683 NBPF4Q96M43 638 aa22.72■■□□□ 1.23
RNF40-203ENST00000493683 GSTA5Q7RTV2 222 aa22.72■■□□□ 1.23
RNF40-203ENST00000493683 DAAM2Q86T65 1068 aa22.72■■□□□ 1.23
RNF40-203ENST00000493683 ERO1AQ96HE7 468 aa22.72■■□□□ 1.23
RNF40-203ENST00000493683 ZBTB16Q05516 673 aa22.72■■□□□ 1.23
RNF40-203ENST00000493683 PAIP2Q9BPZ3 127 aaKnown RBP22.72■■□□□ 1.23
RNF40-203ENST00000493683 ZFYVE9O95405 1425 aa22.71■■□□□ 1.23
RNF40-203ENST00000493683 RPL13P26373 211 aaKnown RBP22.71■■□□□ 1.23
RNF40-203ENST00000493683 ZNF569Q5MCW4 686 aa22.71■■□□□ 1.23
RNF40-203ENST00000493683 FAM76AQ8TAV0 307 aa22.71■■□□□ 1.23
RNF40-203ENST00000493683 SAMD15Q9P1V8 674 aa22.71■■□□□ 1.23
RNF40-203ENST00000493683 PIK3C2GO75747 1445 aa22.71■■□□□ 1.23
RNF40-203ENST00000493683 UBE2Q2Q8WVN8 375 aa22.71■■□□□ 1.23
RNF40-203ENST00000493683 NAP1L3Q99457 506 aaPredicted RBP22.71■■□□□ 1.23
RNF40-203ENST00000493683 IFNKQ9P0W0 207 aa22.71■■□□□ 1.23
RNF40-203ENST00000493683 ATP5DP30049 168 aa22.71■■□□□ 1.23
RNF40-203ENST00000493683 VWA3BQ502W6 1294 aa22.71■■□□□ 1.23
RNF40-203ENST00000493683 ZNF804AQ7Z570 1209 aa22.71■■□□□ 1.23
RNF40-203ENST00000493683 RFC4P35249 363 aa22.7■■□□□ 1.22
RNF40-203ENST00000493683 SETDB1Q15047 1291 aa22.7■■□□□ 1.22
RNF40-203ENST00000493683 GUCA1BQ9UMX6 200 aa22.7■■□□□ 1.22
RNF40-203ENST00000493683 FAM160A1Q05DH4 1040 aa22.7■■□□□ 1.22
RNF40-203ENST00000493683 CPLX4Q7Z7G2 160 aa22.7■■□□□ 1.22
RNF40-203ENST00000493683 RAB3IL1Q8TBN0 382 aa22.7■■□□□ 1.22
RNF40-203ENST00000493683 TCEANC2Q96MN5 208 aa22.7■■□□□ 1.22
RNF40-203ENST00000493683 HELLSQ9NRZ9 838 aa22.7■■□□□ 1.22
RNF40-203ENST00000493683 HDAC9Q9UKV0 1011 aa22.7■■□□□ 1.22
RNF40-203ENST00000493683 EIF2AK4Q9P2K8 1649 aaKnown RBP22.7■■□□□ 1.22
RNF40-203ENST00000493683 FAM13AO94988 1023 aa22.7■■□□□ 1.22
RNF40-203ENST00000493683 DTHD1Q6ZMT9 781 aa22.7■■□□□ 1.22
RNF40-203ENST00000493683 MICALL1Q8N3F8 863 aa22.7■■□□□ 1.22
RNF40-203ENST00000493683 AKR1B15C9JRZ8 316 aaPredicted RBP22.69■■□□□ 1.22
RNF40-203ENST00000493683 TMEM87AQ8NBN3 555 aa22.69■■□□□ 1.22
RNF40-203ENST00000493683 SELENOSQ9BQE4 189 aa22.69■■□□□ 1.22
RNF40-203ENST00000493683 VPS18Q9P253 973 aa22.69■■□□□ 1.22
RNF40-203ENST00000493683 PPFIA3O75145 1194 aa22.69■■□□□ 1.22
RNF40-203ENST00000493683 C8orf58Q8NAV2 365 aa22.69■■□□□ 1.22
RNF40-203ENST00000493683 ANAPC4Q9UJX5 808 aa22.69■■□□□ 1.22
RNF40-203ENST00000493683 SPDYE3A6NKU9 549 aa22.69■■□□□ 1.22
RNF40-203ENST00000493683 CALCOCO2Q13137 446 aa22.69■■□□□ 1.22
RNF40-203ENST00000493683 CFAP58Q5T655 872 aa22.69■■□□□ 1.22
RNF40-203ENST00000493683 CCDC26Q8TAB7 109 aa22.68■■□□□ 1.22
RNF40-203ENST00000493683 NLRP3Q96P20 1036 aa22.68■■□□□ 1.22
RNF40-203ENST00000493683 BAG1Q99933 345 aaPredicted RBP22.68■■□□□ 1.22
RNF40-203ENST00000493683 ZBTB40Q9NUA8 1239 aa22.68■■□□□ 1.22
RNF40-203ENST00000493683 GRIN2AQ12879 1464 aa22.68■■□□□ 1.22
RNF40-203ENST00000493683 CHMLP26374 656 aa22.68■■□□□ 1.22
RNF40-203ENST00000493683 TTC31Q49AM3 519 aaPredicted RBP22.68■■□□□ 1.22
RNF40-203ENST00000493683 SYT10Q6XYQ8 523 aa22.68■■□□□ 1.22
RNF40-203ENST00000493683 ZCRB1Q8TBF4 217 aaKnown RBP22.68■■□□□ 1.22
RNF40-203ENST00000493683 STIM2Q9P246 746 aa22.68■■□□□ 1.22
RNF40-203ENST00000493683 CEP83Q9Y592 693 aa22.68■■□□□ 1.22
RNF40-203ENST00000493683 NYXQ9GZU5 481 aa22.68■■□□□ 1.22
RNF40-203ENST00000493683 HSP90AA4PQ58FG1 418 aa22.67■■□□□ 1.22
RNF40-203ENST00000493683 CCDC110Q8TBZ0 833 aa22.67■■□□□ 1.22
RNF40-203ENST00000493683 LLPHQ9BRT6 129 aaKnown RBP22.67■■□□□ 1.22
RNF40-203ENST00000493683 DDX23Q9BUQ8 820 aaKnown RBP22.67■■□□□ 1.22
RNF40-203ENST00000493683 USP26Q9BXU7 913 aa22.67■■□□□ 1.22
RNF40-203ENST00000493683 TTF2Q9UNY4 1162 aaKnown RBP22.67■■□□□ 1.22
RNF40-203ENST00000493683 AOX1Q06278 1338 aa22.67■■□□□ 1.22
RNF40-203ENST00000493683 THOC2Q8NI27 1593 aaKnown RBP22.67■■□□□ 1.22
RNF40-203ENST00000493683 RILPL1Q5EBL4 403 aa22.67■■□□□ 1.22
RNF40-203ENST00000493683 FBXO31Q5XUX0 539 aaPredicted RBP22.67■■□□□ 1.22
RNF40-203ENST00000493683 ATP6V0A2Q9Y487 856 aa22.67■■□□□ 1.22
RNF40-203ENST00000493683 PLCD1P51178 756 aa22.67■■□□□ 1.22
RNF40-203ENST00000493683 CCDC14Q49A88 953 aa22.67■■□□□ 1.22
RNF40-203ENST00000493683 PLEKHM2Q8IWE5 1019 aa22.67■■□□□ 1.22
RNF40-203ENST00000493683 KDM5BQ9UGL1 1544 aa22.67■■□□□ 1.22
RNF40-203ENST00000493683 CROCCP2Q86T23 111 aa22.67■■□□□ 1.22
RNF40-203ENST00000493683 ZMYND15Q9H091 742 aa22.67■■□□□ 1.22
RNF40-203ENST00000493683 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.67■■□□□ 1.22
RNF40-203ENST00000493683 FANCAO15360 1455 aa22.66■■□□□ 1.22
RNF40-203ENST00000493683 EEF2P13639 858 aaKnown RBP22.66■■□□□ 1.22
RNF40-203ENST00000493683 CSRNP2Q9H175 543 aa22.66■■□□□ 1.22
RNF40-203ENST00000493683 LZTFL1Q9NQ48 299 aa22.66■■□□□ 1.22
RNF40-203ENST00000493683 B4GALNT4Q76KP1 1039 aa22.66■■□□□ 1.22
RNF40-203ENST00000493683 FLT4P35916 1363 aa22.66■■□□□ 1.22
RNF40-203ENST00000493683 PPIP5K1Q6PFW1 1433 aa22.66■■□□□ 1.22
RNF40-203ENST00000493683 ANXA1P04083 346 aa22.66■■□□□ 1.22
RNF40-203ENST00000493683 CCDC114Q96M63 670 aa22.65■■□□□ 1.22
RNF40-203ENST00000493683 SETDB2Q96T68 719 aa22.65■■□□□ 1.22
RNF40-203ENST00000493683 VAMP4O75379 141 aa22.65■■□□□ 1.22
RNF40-203ENST00000493683 APOBRQ0VD83 1088 aa22.65■■□□□ 1.22
RNF40-203ENST00000493683 SEL1L2Q5TEA6 688 aa22.65■■□□□ 1.22
RNF40-203ENST00000493683 CCDC65Q8IXS2 484 aa22.65■■□□□ 1.22
RNF40-203ENST00000493683 KARSQ15046 597 aaKnown RBP22.64■■□□□ 1.22
RNF40-203ENST00000493683 LAMC3Q9Y6N6 1575 aa22.64■■□□□ 1.22
RNF40-203ENST00000493683 CCDC122Q5T0U0 273 aa22.64■■□□□ 1.22
RNF40-203ENST00000493683 CCDC50Q8IVM0 306 aa22.64■■□□□ 1.22
RNF40-203ENST00000493683 CAPZA3Q96KX2 299 aa22.64■■□□□ 1.22
RNF40-203ENST00000493683 MAP7D1Q3KQU3 841 aa22.64■■□□□ 1.21
RNF40-203ENST00000493683 DUOX2Q9NRD8 1548 aa22.64■■□□□ 1.21
RNF40-203ENST00000493683 PLCB3Q01970 1234 aa22.64■■□□□ 1.21
RNF40-203ENST00000493683 CCDC63Q8NA47 563 aa22.64■■□□□ 1.21
RNF40-203ENST00000493683 TXNDC16Q9P2K2 825 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms