RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 ZNF296Q8WUU4 475 aaPredicted RBP22.08■■□□□ 1.13
COL9A1-210ENST00000493682 DEFB129Q9H1M3 183 aa22.08■■□□□ 1.13
COL9A1-210ENST00000493682 IL1R1P14778 569 aa22.07■■□□□ 1.12
COL9A1-210ENST00000493682 ZNF804AQ7Z570 1209 aa22.07■■□□□ 1.12
COL9A1-210ENST00000493682 ANGEL1Q9UNK9 670 aaKnown RBP22.07■■□□□ 1.12
COL9A1-210ENST00000493682 COL1A1P02452 1464 aaPredicted RBP22.07■■□□□ 1.12
COL9A1-210ENST00000493682 A0A1B0GUL6 1792 aa22.07■■□□□ 1.12
COL9A1-210ENST00000493682 GRM8O00222 908 aa22.06■■□□□ 1.12
COL9A1-210ENST00000493682 ANP32CO43423 234 aa22.06■■□□□ 1.12
COL9A1-210ENST00000493682 SLC34A2O95436 690 aa22.06■■□□□ 1.12
COL9A1-210ENST00000493682 SREBF2Q12772 1141 aa22.06■■□□□ 1.12
COL9A1-210ENST00000493682 CCDC57Q2TAC2 916 aa22.06■■□□□ 1.12
COL9A1-210ENST00000493682 ZNF594Q96JF6 807 aaPredicted RBP22.06■■□□□ 1.12
COL9A1-210ENST00000493682 FZD1Q9UP38 647 aa22.06■■□□□ 1.12
COL9A1-210ENST00000493682 PCDHAC2Q9Y5I4 1007 aa22.06■■□□□ 1.12
COL9A1-210ENST00000493682 TNRC18O15417 2968 aaPredicted RBP22.05■■□□□ 1.12
COL9A1-210ENST00000493682 F8W031 263 aaPredicted RBP22.05■■□□□ 1.12
COL9A1-210ENST00000493682 PKN2Q16513 984 aaKnown RBP22.05■■□□□ 1.12
COL9A1-210ENST00000493682 NOM1Q5C9Z4 860 aaKnown RBP22.05■■□□□ 1.12
COL9A1-210ENST00000493682 SPRYD7Q5W111 196 aa22.05■■□□□ 1.12
COL9A1-210ENST00000493682 LDHAL6AQ6ZMR3 332 aa22.05■■□□□ 1.12
COL9A1-210ENST00000493682 HPS5Q9UPZ3 1129 aa22.05■■□□□ 1.12
COL9A1-210ENST00000493682 GPR25O00155 361 aa22.04■■□□□ 1.12
COL9A1-210ENST00000493682 PLIN1O60240 522 aa22.04■■□□□ 1.12
COL9A1-210ENST00000493682 FKBP1AP62942 108 aaKnown RBP22.04■■□□□ 1.12
COL9A1-210ENST00000493682 CFAP100Q494V2 611 aa22.04■■□□□ 1.12
COL9A1-210ENST00000493682 TAF7LQ5H9L4 462 aa22.04■■□□□ 1.12
COL9A1-210ENST00000493682 JAG2Q9Y219 1238 aa22.04■■□□□ 1.12
COL9A1-210ENST00000493682 SPDYE2BA6NHP3 402 aa22.03■■□□□ 1.12
COL9A1-210ENST00000493682 SPDYE6P0CI01 402 aa22.03■■□□□ 1.12
COL9A1-210ENST00000493682 PRMT6Q96LA8 375 aaPredicted RBP22.03■■□□□ 1.12
COL9A1-210ENST00000493682 CFHR5Q9BXR6 569 aa22.03■■□□□ 1.12
COL9A1-210ENST00000493682 CNNM1Q9NRU3 951 aa22.03■■□□□ 1.12
COL9A1-210ENST00000493682 C9orf78Q9NZ63 289 aaPredicted RBP22.03■■□□□ 1.12
COL9A1-210ENST00000493682 PPP2R3BQ9Y5P8 575 aa22.03■■□□□ 1.12
COL9A1-210ENST00000493682 CLRN2A0PK11 232 aa22.02■■□□□ 1.12
COL9A1-210ENST00000493682 MYO1BO43795 1136 aa22.02■■□□□ 1.12
COL9A1-210ENST00000493682 MAP3K11Q16584 847 aa22.02■■□□□ 1.12
COL9A1-210ENST00000493682 SLC10A4Q96EP9 437 aa22.02■■□□□ 1.12
COL9A1-210ENST00000493682 R3HDMLQ9H3Y0 253 aa22.02■■□□□ 1.12
COL9A1-210ENST00000493682 SSC5DA1L4H1 1573 aa22.02■■□□□ 1.12
COL9A1-210ENST00000493682 ALDH1L1O75891 902 aa22.01■■□□□ 1.11
COL9A1-210ENST00000493682 SLC4A10Q6U841 1118 aa22.01■■□□□ 1.11
COL9A1-210ENST00000493682 AOX1Q06278 1338 aa22.01■■□□□ 1.11
COL9A1-210ENST00000493682 PPP1R12BO60237 982 aaPredicted RBP22■■□□□ 1.11
COL9A1-210ENST00000493682 CLMNQ96JQ2 1002 aa22■■□□□ 1.11
COL9A1-210ENST00000493682 SRCIN1Q9C0H9 1055 aa22■■□□□ 1.11
COL9A1-210ENST00000493682 ZBTB4Q9P1Z0 1013 aaPredicted RBP22■■□□□ 1.11
COL9A1-210ENST00000493682 ECM29Q5VYK3 1845 aa21.99■■□□□ 1.11
COL9A1-210ENST00000493682 MANSC4A6NHS7 340 aaPredicted RBP21.99■■□□□ 1.11
COL9A1-210ENST00000493682 FKTNO75072 461 aa21.99■■□□□ 1.11
COL9A1-210ENST00000493682 SUPT20HL1Q3ZLR7 823 aa21.99■■□□□ 1.11
COL9A1-210ENST00000493682 VEZTQ9HBM0 779 aa21.99■■□□□ 1.11
COL9A1-210ENST00000493682 FAM205AQ6ZU69 1335 aa21.99■■□□□ 1.11
COL9A1-210ENST00000493682 ALDH1A1P00352 501 aa21.98■■□□□ 1.11
COL9A1-210ENST00000493682 RBM5P52756 815 aaKnown RBP eCLIP21.98■■□□□ 1.11
COL9A1-210ENST00000493682 INHBEP58166 350 aa21.98■■□□□ 1.11
COL9A1-210ENST00000493682 UBE4AQ14139 1066 aa21.98■■□□□ 1.11
COL9A1-210ENST00000493682 NBPF12Q5TAG4 269 aaPredicted RBP21.98■■□□□ 1.11
COL9A1-210ENST00000493682 TDRD7Q8NHU6 1098 aaKnown RBP21.98■■□□□ 1.11
COL9A1-210ENST00000493682 KAZALD1Q96I82 304 aa21.98■■□□□ 1.11
COL9A1-210ENST00000493682 WNK4Q96J92 1243 aa21.98■■□□□ 1.11
COL9A1-210ENST00000493682 UNCXA6NJT0 531 aa21.97■■□□□ 1.11
COL9A1-210ENST00000493682 ZBTB48P10074 688 aaPredicted RBP21.97■■□□□ 1.11
COL9A1-210ENST00000493682 GYG1P46976 350 aa21.97■■□□□ 1.11
COL9A1-210ENST00000493682 FBXO46Q6PJ61 603 aaPredicted RBP21.97■■□□□ 1.11
COL9A1-210ENST00000493682 IFNL1Q8IU54 200 aa21.97■■□□□ 1.11
COL9A1-210ENST00000493682 SUCLG2Q96I99 432 aa21.97■■□□□ 1.11
COL9A1-210ENST00000493682 PUS3Q9BZE2 481 aaKnown RBP21.97■■□□□ 1.11
COL9A1-210ENST00000493682 HIBADHP31937 336 aaKnown RBP21.96■■□□□ 1.11
COL9A1-210ENST00000493682 RASA3Q14644 834 aa21.96■■□□□ 1.11
COL9A1-210ENST00000493682 MFSD14BQ5SR56 506 aa21.96■■□□□ 1.11
COL9A1-210ENST00000493682 FAM9BQ8IZU0 186 aa21.96■■□□□ 1.11
COL9A1-210ENST00000493682 FAM84BQ96KN1 310 aaPredicted RBP21.96■■□□□ 1.11
COL9A1-210ENST00000493682 USP2O75604 605 aaPredicted RBP21.95■■□□□ 1.1
COL9A1-210ENST00000493682 NBPF7P0C2Y1 421 aaPredicted RBP21.95■■□□□ 1.1
COL9A1-210ENST00000493682 TTF2Q9UNY4 1162 aaKnown RBP21.95■■□□□ 1.1
COL9A1-210ENST00000493682 ZNF316A6NFI3 1004 aaPredicted RBP21.94■■□□□ 1.1
COL9A1-210ENST00000493682 IGF2BP3O00425 579 aaKnown RBP eCLIP21.94■■□□□ 1.1
COL9A1-210ENST00000493682 IREB2P48200 963 aaKnown RBP21.94■■□□□ 1.1
COL9A1-210ENST00000493682 SPDYE2Q495Y8 402 aa21.94■■□□□ 1.1
COL9A1-210ENST00000493682 ZNF70Q9UC06 446 aaPredicted RBP21.94■■□□□ 1.1
COL9A1-210ENST00000493682 SERPINA10Q9UK55 444 aa21.94■■□□□ 1.1
COL9A1-210ENST00000493682 RIPOR2Q9Y4F9 1068 aa21.94■■□□□ 1.1
COL9A1-210ENST00000493682 UTYO14607 1347 aa21.93■■□□□ 1.1
COL9A1-210ENST00000493682 MROH5Q6ZUA9 1318 aa21.92■■□□□ 1.1
COL9A1-210ENST00000493682 GJA5P36382 358 aa21.92■■□□□ 1.1
COL9A1-210ENST00000493682 TNFAIP1Q13829 316 aa21.92■■□□□ 1.1
COL9A1-210ENST00000493682 ANKRD13AQ8IZ07 590 aa21.92■■□□□ 1.1
COL9A1-210ENST00000493682 TDRD3Q9H7E2 651 aaKnown RBP21.92■■□□□ 1.1
COL9A1-210ENST00000493682 ZNF521Q96K83 1311 aa21.91■■□□□ 1.1
COL9A1-210ENST00000493682 DZIP1LQ8IYY4 767 aaKnown RBP21.91■■□□□ 1.1
COL9A1-210ENST00000493682 BICC1Q9H694 974 aaKnown RBP21.91■■□□□ 1.1
COL9A1-210ENST00000493682 LAMB1P07942 1786 aa21.91■■□□□ 1.1
COL9A1-210ENST00000493682 RABL6Q3YEC7 729 aaPredicted RBP21.9■■□□□ 1.1
COL9A1-210ENST00000493682 FBXO33Q7Z6M2 555 aa21.9■■□□□ 1.1
COL9A1-210ENST00000493682 TEPSINQ96N21 525 aa21.9■■□□□ 1.1
COL9A1-210ENST00000493682 PDE4DIPQ5VU43 2346 aa21.9■■□□□ 1.1
COL9A1-210ENST00000493682 ZEB1P37275 1124 aaPredicted RBP21.89■■□□□ 1.09
COL9A1-210ENST00000493682 CRKP46108 304 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms