RNA–Protein interactions for RNA: ENST00000493358.1

SNED1-212, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-212ENST00000493358 BICC1Q9H694 974 aaKnown RBP16.83■□□□□ 0.28
SNED1-212ENST00000493358 SMC4Q9NTJ3 1288 aa16.83■□□□□ 0.28
SNED1-212ENST00000493358 SCAF8Q9UPN6 1271 aaKnown RBP16.83■□□□□ 0.28
SNED1-212ENST00000493358 IRS2Q9Y4H2 1338 aa16.82■□□□□ 0.28
SNED1-212ENST00000493358 F8W031 263 aaPredicted RBP16.82■□□□□ 0.28
SNED1-212ENST00000493358 FKBP1AP62942 108 aaKnown RBP16.82■□□□□ 0.28
SNED1-212ENST00000493358 ARMC9Q7Z3E5 817 aa16.82■□□□□ 0.28
SNED1-212ENST00000493358 VPS37DQ86XT2 251 aa16.82■□□□□ 0.28
SNED1-212ENST00000493358 ABHD8Q96I13 439 aa16.82■□□□□ 0.28
SNED1-212ENST00000493358 ZIC5Q96T25 663 aa16.82■□□□□ 0.28
SNED1-212ENST00000493358 SAGE1Q9NXZ1 904 aa16.82■□□□□ 0.28
SNED1-212ENST00000493358 CCER2I3L3R5 266 aa16.81■□□□□ 0.28
SNED1-212ENST00000493358 RBM5P52756 815 aaKnown RBP eCLIP16.81■□□□□ 0.28
SNED1-212ENST00000493358 PRAMEF18Q5VWM3 479 aa16.81■□□□□ 0.28
SNED1-212ENST00000493358 RASAL3Q86YV0 1011 aa16.81■□□□□ 0.28
SNED1-212ENST00000493358 AK9Q5TCS8 1911 aa16.8■□□□□ 0.28
SNED1-212ENST00000493358 CT47B1P0C2W7 299 aaPredicted RBP16.8■□□□□ 0.28
SNED1-212ENST00000493358 HIBADHP31937 336 aaKnown RBP16.8■□□□□ 0.28
SNED1-212ENST00000493358 RABL6Q3YEC7 729 aaPredicted RBP16.8■□□□□ 0.28
SNED1-212ENST00000493358 METTL24Q5JXM2 366 aa16.8■□□□□ 0.28
SNED1-212ENST00000493358 JAG2Q9Y219 1238 aa16.8■□□□□ 0.28
SNED1-212ENST00000493358 UBE2Q2LH0YL09 131 aa16.79■□□□□ 0.28
SNED1-212ENST00000493358 FRAT2O75474 233 aaPredicted RBP16.79■□□□□ 0.28
SNED1-212ENST00000493358 CFAP100Q494V2 611 aa16.79■□□□□ 0.28
SNED1-212ENST00000493358 CERS5Q8N5B7 392 aa16.79■□□□□ 0.28
SNED1-212ENST00000493358 MTMR14Q8NCE2 650 aa16.79■□□□□ 0.28
SNED1-212ENST00000493358 KAZALD1Q96I82 304 aa16.79■□□□□ 0.28
SNED1-212ENST00000493358 PUS3Q9BZE2 481 aaKnown RBP16.79■□□□□ 0.28
SNED1-212ENST00000493358 PPP2R3BQ9Y5P8 575 aa16.79■□□□□ 0.28
SNED1-212ENST00000493358 FAM205AQ6ZU69 1335 aa16.78■□□□□ 0.28
SNED1-212ENST00000493358 TRPA1O75762 1119 aa16.78■□□□□ 0.28
SNED1-212ENST00000493358 GYG1P46976 350 aa16.78■□□□□ 0.28
SNED1-212ENST00000493358 CAVIN4Q5BKX8 364 aa16.78■□□□□ 0.28
SNED1-212ENST00000493358 MFSD14BQ5SR56 506 aa16.78■□□□□ 0.28
SNED1-212ENST00000493358 MOB2Q70IA6 237 aa16.78■□□□□ 0.28
SNED1-212ENST00000493358 CDCA7LQ96GN5 454 aa16.78■□□□□ 0.28
SNED1-212ENST00000493358 ZBED3Q96IU2 234 aaPredicted RBP16.78■□□□□ 0.28
SNED1-212ENST00000493358 VEZTQ9HBM0 779 aa16.78■□□□□ 0.28
SNED1-212ENST00000493358 LAMB1P07942 1786 aa16.78■□□□□ 0.28
SNED1-212ENST00000493358 OTOFQ9HC10 1997 aa16.77■□□□□ 0.28
SNED1-212ENST00000493358 SPDYE2BA6NHP3 402 aa16.77■□□□□ 0.28
SNED1-212ENST00000493358 SPDYE6P0CI01 402 aa16.77■□□□□ 0.28
SNED1-212ENST00000493358 PRKG1Q13976 671 aa16.77■□□□□ 0.28
SNED1-212ENST00000493358 ANKRD44Q8N8A2 993 aa16.77■□□□□ 0.28
SNED1-212ENST00000493358 TDRD7Q8NHU6 1098 aaKnown RBP16.77■□□□□ 0.28
SNED1-212ENST00000493358 CSRNP1Q96S65 589 aa16.77■□□□□ 0.28
SNED1-212ENST00000493358 DEFB129Q9H1M3 183 aa16.77■□□□□ 0.28
SNED1-212ENST00000493358 RNF186Q9NXI6 227 aa16.77■□□□□ 0.28
SNED1-212ENST00000493358 HDAC5Q9UQL6 1122 aa16.77■□□□□ 0.28
SNED1-212ENST00000493358 RIPOR2Q9Y4F9 1068 aa16.77■□□□□ 0.28
SNED1-212ENST00000493358 DGKZQ13574 1117 aa16.76■□□□□ 0.27
SNED1-212ENST00000493358 TNFAIP1Q13829 316 aa16.76■□□□□ 0.27
SNED1-212ENST00000493358 API5Q9BZZ5 524 aaKnown RBP16.76■□□□□ 0.27
SNED1-212ENST00000493358 USP44Q9H0E7 712 aa16.76■□□□□ 0.27
SNED1-212ENST00000493358 ANGEL1Q9UNK9 670 aaKnown RBP16.76■□□□□ 0.27
SNED1-212ENST00000493358 TTF2Q9UNY4 1162 aaKnown RBP16.76■□□□□ 0.27
SNED1-212ENST00000493358 CLRN2A0PK11 232 aa16.75■□□□□ 0.27
SNED1-212ENST00000493358 CCDC85CA6NKD9 419 aa16.75■□□□□ 0.27
SNED1-212ENST00000493358 PPP1R12BO60237 982 aaPredicted RBP16.75■□□□□ 0.27
SNED1-212ENST00000493358 PDE8BO95263 885 aa16.75■□□□□ 0.27
SNED1-212ENST00000493358 IFIT1P09914 478 aaKnown RBP16.75■□□□□ 0.27
SNED1-212ENST00000493358 UBTFL1P0CB47 393 aaPredicted RBP16.75■□□□□ 0.27
SNED1-212ENST00000493358 SREBF2Q12772 1141 aa16.75■□□□□ 0.27
SNED1-212ENST00000493358 SUPT20HL1Q3ZLR7 823 aa16.75■□□□□ 0.27
SNED1-212ENST00000493358 LRRC24Q50LG9 513 aa16.75■□□□□ 0.27
SNED1-212ENST00000493358 TBC1D22AQ8WUA7 517 aa16.75■□□□□ 0.27
SNED1-212ENST00000493358 FAM84BQ96KN1 310 aaPredicted RBP16.75■□□□□ 0.27
SNED1-212ENST00000493358 CHAF1AQ13111 956 aaPredicted RBP16.74■□□□□ 0.27
SNED1-212ENST00000493358 PUM3Q15397 648 aaKnown RBP16.74■□□□□ 0.27
SNED1-212ENST00000493358 MCOLN1Q9GZU1 580 aa16.74■□□□□ 0.27
SNED1-212ENST00000493358 SERPINA10Q9UK55 444 aa16.74■□□□□ 0.27
SNED1-212ENST00000493358 KIF16BQ96L93 1317 aa16.73■□□□□ 0.27
SNED1-212ENST00000493358 TRMT2AQ8IZ69 625 aaKnown RBP16.73■□□□□ 0.27
SNED1-212ENST00000493358 KLHDC4Q8TBB5 520 aa16.73■□□□□ 0.27
SNED1-212ENST00000493358 PRMT6Q96LA8 375 aaPredicted RBP16.73■□□□□ 0.27
SNED1-212ENST00000493358 IQSEC3Q9UPP2 1182 aaPredicted RBP16.73■□□□□ 0.27
SNED1-212ENST00000493358 SLC5A1P13866 664 aa16.72■□□□□ 0.27
SNED1-212ENST00000493358 IREB2P48200 963 aaKnown RBP16.72■□□□□ 0.27
SNED1-212ENST00000493358 TNNI2P48788 182 aa16.72■□□□□ 0.27
SNED1-212ENST00000493358 PTPN12Q05209 780 aaKnown RBP16.72■□□□□ 0.27
SNED1-212ENST00000493358 MKRN3Q13064 507 aaKnown RBP16.72■□□□□ 0.27
SNED1-212ENST00000493358 FBXO33Q7Z6M2 555 aa16.72■□□□□ 0.27
SNED1-212ENST00000493358 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.72■□□□□ 0.27
SNED1-212ENST00000493358 NOB1Q9ULX3 412 aaKnown RBP16.72■□□□□ 0.27
SNED1-212ENST00000493358 PCDHAC2Q9Y5I4 1007 aa16.72■□□□□ 0.27
SNED1-212ENST00000493358 MAST3O60307 1309 aa16.71■□□□□ 0.27
SNED1-212ENST00000493358 MYH2Q9UKX2 1941 aa16.71■□□□□ 0.27
SNED1-212ENST00000493358 EYA2O00167 538 aa16.71■□□□□ 0.27
SNED1-212ENST00000493358 VGLL2Q8N8G2 317 aa16.71■□□□□ 0.27
SNED1-212ENST00000493358 SLC10A4Q96EP9 437 aa16.71■□□□□ 0.27
SNED1-212ENST00000493358 TMOD2Q9NZR1 351 aa16.71■□□□□ 0.27
SNED1-212ENST00000493358 SSC5DA1L4H1 1573 aa16.7■□□□□ 0.26
SNED1-212ENST00000493358 UNCXA6NJT0 531 aa16.7■□□□□ 0.26
SNED1-212ENST00000493358 CRKP46108 304 aa16.7■□□□□ 0.26
SNED1-212ENST00000493358 RASA3Q14644 834 aa16.7■□□□□ 0.26
SNED1-212ENST00000493358 SPDYE2Q495Y8 402 aa16.7■□□□□ 0.26
SNED1-212ENST00000493358 LDLRAD1Q5T700 205 aa16.7■□□□□ 0.26
SNED1-212ENST00000493358 DZIP1LQ8IYY4 767 aaKnown RBP16.7■□□□□ 0.26
SNED1-212ENST00000493358 TEKT1Q969V4 418 aa16.7■□□□□ 0.26
SNED1-212ENST00000493358 ZNF70Q9UC06 446 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms