RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-215ENST00000492451 CST9Q5W186 159 aa17.11■□□□□ 0.33
PTPN7-215ENST00000492451 CEP85Q6P2H3 762 aa17.11■□□□□ 0.33
PTPN7-215ENST00000492451 SAMD7Q7Z3H4 446 aa17.11■□□□□ 0.33
PTPN7-215ENST00000492451 FBXO33Q7Z6M2 555 aa17.11■□□□□ 0.33
PTPN7-215ENST00000492451 TDRD7Q8NHU6 1098 aaKnown RBP17.11■□□□□ 0.33
PTPN7-215ENST00000492451 GMLQ99445 158 aa17.11■□□□□ 0.33
PTPN7-215ENST00000492451 PGAP2Q9UHJ9 254 aa17.11■□□□□ 0.33
PTPN7-215ENST00000492451 AKAP2Q9Y2D5 859 aa17.11■□□□□ 0.33
PTPN7-215ENST00000492451 USP17L8P0C7I0 530 aa17.1■□□□□ 0.33
PTPN7-215ENST00000492451 HSPA1AP0DMV8 641 aaKnown RBP17.1■□□□□ 0.33
PTPN7-215ENST00000492451 HSPA1BP0DMV9 641 aaKnown RBP17.1■□□□□ 0.33
PTPN7-215ENST00000492451 FKBP1AP62942 108 aaKnown RBP17.1■□□□□ 0.33
PTPN7-215ENST00000492451 RPAP2Q8IXW5 612 aaPredicted RBP17.1■□□□□ 0.33
PTPN7-215ENST00000492451 OGFOD1Q8N543 542 aa17.1■□□□□ 0.33
PTPN7-215ENST00000492451 ZC3H15Q8WU90 426 aaKnown RBP17.1■□□□□ 0.33
PTPN7-215ENST00000492451 GLIS2Q9BZE0 524 aaPredicted RBP17.1■□□□□ 0.33
PTPN7-215ENST00000492451 ZNF646O15015 1829 aaPredicted RBP17.1■□□□□ 0.33
PTPN7-215ENST00000492451 ZNF280AP59817 542 aaPredicted RBP17.09■□□□□ 0.33
PTPN7-215ENST00000492451 COL13A1Q5TAT6 717 aaPredicted RBP17.09■□□□□ 0.33
PTPN7-215ENST00000492451 FAM205AQ6ZU69 1335 aa17.09■□□□□ 0.33
PTPN7-215ENST00000492451 RASSF10A6NK89 507 aa17.08■□□□□ 0.32
PTPN7-215ENST00000492451 FRAT2O75474 233 aaPredicted RBP17.08■□□□□ 0.32
PTPN7-215ENST00000492451 SURF6O75683 361 aaKnown RBP17.08■□□□□ 0.32
PTPN7-215ENST00000492451 TFCP2Q12800 502 aa17.08■□□□□ 0.32
PTPN7-215ENST00000492451 OS9Q13438 667 aaPredicted RBP17.08■□□□□ 0.32
PTPN7-215ENST00000492451 TBC1D10BQ4KMP7 808 aaPredicted RBP17.08■□□□□ 0.32
PTPN7-215ENST00000492451 NOP58Q9Y2X3 529 aaKnown RBP17.08■□□□□ 0.32
PTPN7-215ENST00000492451 HMMRO75330 724 aa17.07■□□□□ 0.32
PTPN7-215ENST00000492451 BCAMP50895 628 aa17.07■□□□□ 0.32
PTPN7-215ENST00000492451 IFFO2Q5TF58 517 aa17.07■□□□□ 0.32
PTPN7-215ENST00000492451 GNL3LQ9NVN8 582 aaKnown RBP17.07■□□□□ 0.32
PTPN7-215ENST00000492451 HDAC9Q9UKV0 1011 aa17.07■□□□□ 0.32
PTPN7-215ENST00000492451 ASTN2O75129 1339 aaPredicted RBP17.06■□□□□ 0.32
PTPN7-215ENST00000492451 KIF4BQ2VIQ3 1234 aa17.06■□□□□ 0.32
PTPN7-215ENST00000492451 HSP90AB4PQ58FF6 505 aa17.06■□□□□ 0.32
PTPN7-215ENST00000492451 RBM26Q5T8P6 1007 aaKnown RBP17.06■□□□□ 0.32
PTPN7-215ENST00000492451 MXD3Q9BW11 206 aa17.06■□□□□ 0.32
PTPN7-215ENST00000492451 MYOZ2Q9NPC6 264 aa17.06■□□□□ 0.32
PTPN7-215ENST00000492451 ARAP2Q8WZ64 1704 aa17.06■□□□□ 0.32
PTPN7-215ENST00000492451 A0A1B0GUL7 405 aa17.05■□□□□ 0.32
PTPN7-215ENST00000492451 TIMM10P62072 90 aa17.05■□□□□ 0.32
PTPN7-215ENST00000492451 DEFB115Q30KQ5 88 aa17.05■□□□□ 0.32
PTPN7-215ENST00000492451 ERC1Q8IUD2 1116 aa17.05■□□□□ 0.32
PTPN7-215ENST00000492451 TBC1D22AQ8WUA7 517 aa17.05■□□□□ 0.32
PTPN7-215ENST00000492451 GPR108Q9NPR9 543 aa17.05■□□□□ 0.32
PTPN7-215ENST00000492451 ABT1Q9ULW3 272 aaKnown RBP17.05■□□□□ 0.32
PTPN7-215ENST00000492451 SEMA3EO15041 775 aa17.04■□□□□ 0.32
PTPN7-215ENST00000492451 ZBTB22O15209 634 aa17.04■□□□□ 0.32
PTPN7-215ENST00000492451 MFSD14BQ5SR56 506 aa17.04■□□□□ 0.32
PTPN7-215ENST00000492451 USP48Q86UV5 1035 aa17.04■□□□□ 0.32
PTPN7-215ENST00000492451 KIAA0825Q8IV33 1275 aa17.04■□□□□ 0.32
PTPN7-215ENST00000492451 CERS5Q8N5B7 392 aa17.04■□□□□ 0.32
PTPN7-215ENST00000492451 IQSEC3Q9UPP2 1182 aaPredicted RBP17.04■□□□□ 0.32
PTPN7-215ENST00000492451 MYH13Q9UKX3 1938 aa17.04■□□□□ 0.32
PTPN7-215ENST00000492451 CELF2O95319 508 aaKnown RBP17.03■□□□□ 0.32
PTPN7-215ENST00000492451 CHAF1AQ13111 956 aaPredicted RBP17.03■□□□□ 0.32
PTPN7-215ENST00000492451 GORABQ5T7V8 394 aa17.03■□□□□ 0.32
PTPN7-215ENST00000492451 NEUROD6Q96NK8 337 aa17.03■□□□□ 0.32
PTPN7-215ENST00000492451 JAG2Q9Y219 1238 aa17.03■□□□□ 0.32
PTPN7-215ENST00000492451 WDR33Q9C0J8 1336 aaKnown RBP17.02■□□□□ 0.32
PTPN7-215ENST00000492451 ADM5C9JUS6 153 aa17.02■□□□□ 0.32
PTPN7-215ENST00000492451 FOXN1O15353 648 aa17.02■□□□□ 0.32
PTPN7-215ENST00000492451 ADORA1P30542 326 aa17.02■□□□□ 0.32
PTPN7-215ENST00000492451 CCDC102BQ68D86 513 aa17.02■□□□□ 0.32
PTPN7-215ENST00000492451 CYP4F22Q6NT55 531 aa17.02■□□□□ 0.32
PTPN7-215ENST00000492451 CDC37L1Q7L3B6 337 aa17.02■□□□□ 0.32
PTPN7-215ENST00000492451 WDR66Q8TBY9 1149 aa17.02■□□□□ 0.32
PTPN7-215ENST00000492451 DCPSQ96C86 337 aaKnown RBP17.02■□□□□ 0.32
PTPN7-215ENST00000492451 XAGE2Q96GT9 111 aa17.02■□□□□ 0.32
PTPN7-215ENST00000492451 TLL2Q9Y6L7 1015 aa17.02■□□□□ 0.32
PTPN7-215ENST00000492451 PHKA1P46020 1223 aa17.01■□□□□ 0.31
PTPN7-215ENST00000492451 SCARF1Q14162 830 aa17.01■□□□□ 0.31
PTPN7-215ENST00000492451 SIRT2Q8IXJ6 389 aa17.01■□□□□ 0.31
PTPN7-215ENST00000492451 ZNF408Q9H9D4 720 aa17.01■□□□□ 0.31
PTPN7-215ENST00000492451 DENND2AQ9ULE3 1009 aa17.01■□□□□ 0.31
PTPN7-215ENST00000492451 EXOC6BQ9Y2D4 811 aa17.01■□□□□ 0.31
PTPN7-215ENST00000492451 SUGT1Q9Y2Z0 365 aa17.01■□□□□ 0.31
PTPN7-215ENST00000492451 DLGAP5Q15398 846 aa17■□□□□ 0.31
PTPN7-215ENST00000492451 TNNI3KQ59H18 835 aa17■□□□□ 0.31
PTPN7-215ENST00000492451 SAPCD2Q86UD0 394 aa17■□□□□ 0.31
PTPN7-215ENST00000492451 MTMR14Q8NCE2 650 aa17■□□□□ 0.31
PTPN7-215ENST00000492451 CAPNS2Q96L46 248 aa17■□□□□ 0.31
PTPN7-215ENST00000492451 TRPM7Q96QT4 1865 aa17■□□□□ 0.31
PTPN7-215ENST00000492451 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17■□□□□ 0.31
PTPN7-215ENST00000492451 FPGT-TNNI3KV9GXZ4 949 aa17■□□□□ 0.31
PTPN7-215ENST00000492451 PDS5AQ29RF7 1337 aaKnown RBP16.99■□□□□ 0.31
PTPN7-215ENST00000492451 PITPNM2Q9BZ72 1349 aa16.99■□□□□ 0.31
PTPN7-215ENST00000492451 F8W031 263 aaPredicted RBP16.99■□□□□ 0.31
PTPN7-215ENST00000492451 RAB11FIP3O75154 756 aa16.99■□□□□ 0.31
PTPN7-215ENST00000492451 GRM1Q13255 1194 aa16.99■□□□□ 0.31
PTPN7-215ENST00000492451 KRT26Q7Z3Y9 468 aa16.99■□□□□ 0.31
PTPN7-215ENST00000492451 WBP1LQ9NX94 342 aa16.99■□□□□ 0.31
PTPN7-215ENST00000492451 GGA3Q9NZ52 723 aa16.99■□□□□ 0.31
PTPN7-215ENST00000492451 SERPINA10Q9UK55 444 aa16.99■□□□□ 0.31
PTPN7-215ENST00000492451 TTF2Q9UNY4 1162 aaKnown RBP16.99■□□□□ 0.31
PTPN7-215ENST00000492451 SCAF8Q9UPN6 1271 aaKnown RBP16.99■□□□□ 0.31
PTPN7-215ENST00000492451 MAST3O60307 1309 aa16.98■□□□□ 0.31
PTPN7-215ENST00000492451 WNT10BO00744 389 aa16.98■□□□□ 0.31
PTPN7-215ENST00000492451 AOC2O75106 756 aa16.98■□□□□ 0.31
PTPN7-215ENST00000492451 UQCRFS1P1P0C7P4 283 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms