RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 SUPT20HL1Q3ZLR7 823 aa11.56□□□□□ -0.56
HDAC3-212ENST00000492407 LMBR1LQ6UX01 489 aa11.56□□□□□ -0.56
HDAC3-212ENST00000492407 LDHAL6AQ6ZMR3 332 aa11.56□□□□□ -0.56
HDAC3-212ENST00000492407 DEFB129Q9H1M3 183 aa11.56□□□□□ -0.56
HDAC3-212ENST00000492407 C9orf78Q9NZ63 289 aaPredicted RBP11.56□□□□□ -0.56
HDAC3-212ENST00000492407 FAM205AQ6ZU69 1335 aa11.56□□□□□ -0.56
HDAC3-212ENST00000492407 CACNA1FO60840 1977 aa11.56□□□□□ -0.56
HDAC3-212ENST00000492407 POLR2AP24928 1970 aaKnown RBP11.56□□□□□ -0.56
HDAC3-212ENST00000492407 PPP1R12BO60237 982 aaPredicted RBP11.55□□□□□ -0.56
HDAC3-212ENST00000492407 TAF7LQ5H9L4 462 aa11.55□□□□□ -0.56
HDAC3-212ENST00000492407 PRAMEF18Q5VWM3 479 aa11.55□□□□□ -0.56
HDAC3-212ENST00000492407 MOB2Q70IA6 237 aa11.55□□□□□ -0.56
HDAC3-212ENST00000492407 CERS5Q8N5B7 392 aa11.55□□□□□ -0.56
HDAC3-212ENST00000492407 SRCIN1Q9C0H9 1055 aa11.55□□□□□ -0.56
HDAC3-212ENST00000492407 UTYO14607 1347 aa11.55□□□□□ -0.56
HDAC3-212ENST00000492407 SPDYE2BA6NHP3 402 aa11.54□□□□□ -0.56
HDAC3-212ENST00000492407 MANSC4A6NHS7 340 aaPredicted RBP11.54□□□□□ -0.56
HDAC3-212ENST00000492407 F6X3S4 739 aa11.54□□□□□ -0.56
HDAC3-212ENST00000492407 TAF5LO75529 589 aa11.54□□□□□ -0.56
HDAC3-212ENST00000492407 SPDYE6P0CI01 402 aa11.54□□□□□ -0.56
HDAC3-212ENST00000492407 ZBTB48P10074 688 aaPredicted RBP11.54□□□□□ -0.56
HDAC3-212ENST00000492407 PTPN12Q05209 780 aaKnown RBP11.54□□□□□ -0.56
HDAC3-212ENST00000492407 SPRYD7Q5W111 196 aa11.54□□□□□ -0.56
HDAC3-212ENST00000492407 CNNM1Q9NRU3 951 aa11.54□□□□□ -0.56
HDAC3-212ENST00000492407 CHMP3Q9Y3E7 222 aa11.54□□□□□ -0.56
HDAC3-212ENST00000492407 GPR25O00155 361 aa11.53□□□□□ -0.56
HDAC3-212ENST00000492407 TNFAIP1Q13829 316 aa11.53□□□□□ -0.56
HDAC3-212ENST00000492407 CFAP100Q494V2 611 aa11.53□□□□□ -0.56
HDAC3-212ENST00000492407 HELBQ8NG08 1087 aaPredicted RBP11.53□□□□□ -0.56
HDAC3-212ENST00000492407 TDRD7Q8NHU6 1098 aaKnown RBP11.53□□□□□ -0.56
HDAC3-212ENST00000492407 ZNF296Q8WUU4 475 aaPredicted RBP11.53□□□□□ -0.56
HDAC3-212ENST00000492407 SLC10A4Q96EP9 437 aa11.53□□□□□ -0.56
HDAC3-212ENST00000492407 SPINK5Q9NQ38 1064 aaPredicted RBP11.53□□□□□ -0.56
HDAC3-212ENST00000492407 SERPINA10Q9UK55 444 aa11.53□□□□□ -0.56
HDAC3-212ENST00000492407 ANGEL1Q9UNK9 670 aaKnown RBP11.53□□□□□ -0.56
HDAC3-212ENST00000492407 MROH5Q6ZUA9 1318 aa11.53□□□□□ -0.56
HDAC3-212ENST00000492407 CASP8AP2Q9UKL3 1982 aa11.52□□□□□ -0.56
HDAC3-212ENST00000492407 ZNF646O15015 1829 aaPredicted RBP11.52□□□□□ -0.57
HDAC3-212ENST00000492407 TBC1D8O95759 1140 aa11.52□□□□□ -0.57
HDAC3-212ENST00000492407 HIBADHP31937 336 aaKnown RBP11.52□□□□□ -0.57
HDAC3-212ENST00000492407 IREB2P48200 963 aaKnown RBP11.52□□□□□ -0.57
HDAC3-212ENST00000492407 RABL6Q3YEC7 729 aaPredicted RBP11.52□□□□□ -0.57
HDAC3-212ENST00000492407 EPHA10Q5JZY3 1008 aa11.52□□□□□ -0.57
HDAC3-212ENST00000492407 MRIQ9BWK5 157 aa11.52□□□□□ -0.57
HDAC3-212ENST00000492407 SCAF8Q9UPN6 1271 aaKnown RBP11.52□□□□□ -0.57
HDAC3-212ENST00000492407 SALL2Q9Y467 1007 aaPredicted RBP11.52□□□□□ -0.57
HDAC3-212ENST00000492407 PTPRCP08575 1304 aa11.52□□□□□ -0.57
HDAC3-212ENST00000492407 ZNF521Q96K83 1311 aa11.52□□□□□ -0.57
HDAC3-212ENST00000492407 SNAP23O00161 211 aa11.51□□□□□ -0.57
HDAC3-212ENST00000492407 FKTNO75072 461 aa11.51□□□□□ -0.57
HDAC3-212ENST00000492407 HDLBPQ00341 1268 aaKnown RBP11.51□□□□□ -0.57
HDAC3-212ENST00000492407 OTUD7BQ6GQQ9 843 aa11.51□□□□□ -0.57
HDAC3-212ENST00000492407 FBXO46Q6PJ61 603 aaPredicted RBP11.51□□□□□ -0.57
HDAC3-212ENST00000492407 TBC1D22AQ8WUA7 517 aa11.51□□□□□ -0.57
HDAC3-212ENST00000492407 FAM84BQ96KN1 310 aaPredicted RBP11.51□□□□□ -0.57
HDAC3-212ENST00000492407 PRMT6Q96LA8 375 aaPredicted RBP11.51□□□□□ -0.57
HDAC3-212ENST00000492407 HPS5Q9UPZ3 1129 aa11.51□□□□□ -0.57
HDAC3-212ENST00000492407 RIPOR2Q9Y4F9 1068 aa11.51□□□□□ -0.57
HDAC3-212ENST00000492407 AKAP11Q9UKA4 1901 aa11.5□□□□□ -0.57
HDAC3-212ENST00000492407 TULP1O00294 542 aaPredicted RBP11.5□□□□□ -0.57
HDAC3-212ENST00000492407 SLC34A2O95436 690 aa11.5□□□□□ -0.57
HDAC3-212ENST00000492407 MFSD14BQ5SR56 506 aa11.5□□□□□ -0.57
HDAC3-212ENST00000492407 SLC4A10Q6U841 1118 aa11.5□□□□□ -0.57
HDAC3-212ENST00000492407 IFNL1Q8IU54 200 aa11.5□□□□□ -0.57
HDAC3-212ENST00000492407 ANKRD13AQ8IZ07 590 aa11.5□□□□□ -0.57
HDAC3-212ENST00000492407 KAZALD1Q96I82 304 aa11.5□□□□□ -0.57
HDAC3-212ENST00000492407 ZNF594Q96JF6 807 aaPredicted RBP11.5□□□□□ -0.57
HDAC3-212ENST00000492407 KIF16BQ96L93 1317 aa11.5□□□□□ -0.57
HDAC3-212ENST00000492407 TESPA1A2RU30 521 aaPredicted RBP11.49□□□□□ -0.57
HDAC3-212ENST00000492407 PLIN1O60240 522 aa11.49□□□□□ -0.57
HDAC3-212ENST00000492407 USP2O75604 605 aaPredicted RBP11.49□□□□□ -0.57
HDAC3-212ENST00000492407 NBPF7P0C2Y1 421 aaPredicted RBP11.49□□□□□ -0.57
HDAC3-212ENST00000492407 TNNI2P48788 182 aa11.49□□□□□ -0.57
HDAC3-212ENST00000492407 PRKG1Q13976 671 aa11.49□□□□□ -0.57
HDAC3-212ENST00000492407 RASA3Q14644 834 aa11.49□□□□□ -0.57
HDAC3-212ENST00000492407 SPDYE2Q495Y8 402 aa11.49□□□□□ -0.57
HDAC3-212ENST00000492407 CAVIN4Q5BKX8 364 aa11.49□□□□□ -0.57
HDAC3-212ENST00000492407 FBXO33Q7Z6M2 555 aa11.49□□□□□ -0.57
HDAC3-212ENST00000492407 FAM9BQ8IZU0 186 aa11.49□□□□□ -0.57
HDAC3-212ENST00000492407 SUCLG2Q96I99 432 aa11.49□□□□□ -0.57
HDAC3-212ENST00000492407 WNK4Q96J92 1243 aa11.49□□□□□ -0.57
HDAC3-212ENST00000492407 SUGT1Q9Y2Z0 365 aa11.49□□□□□ -0.57
HDAC3-212ENST00000492407 E9PSI1 815 aa11.48□□□□□ -0.57
HDAC3-212ENST00000492407 F8W031 263 aaPredicted RBP11.48□□□□□ -0.57
HDAC3-212ENST00000492407 PDE8BO95263 885 aa11.48□□□□□ -0.57
HDAC3-212ENST00000492407 GYG1P46976 350 aa11.48□□□□□ -0.57
HDAC3-212ENST00000492407 RBM5P52756 815 aaKnown RBP eCLIP11.48□□□□□ -0.57
HDAC3-212ENST00000492407 NBPF12Q5TAG4 269 aaPredicted RBP11.48□□□□□ -0.57
HDAC3-212ENST00000492407 VPS37DQ86XT2 251 aa11.48□□□□□ -0.57
HDAC3-212ENST00000492407 MRPL50Q8N5N7 158 aaKnown RBP11.48□□□□□ -0.57
HDAC3-212ENST00000492407 VEZTQ9HBM0 779 aa11.48□□□□□ -0.57
HDAC3-212ENST00000492407 ZNF70Q9UC06 446 aaPredicted RBP11.48□□□□□ -0.57
HDAC3-212ENST00000492407 TTF2Q9UNY4 1162 aaKnown RBP11.48□□□□□ -0.57
HDAC3-212ENST00000492407 SPEF2Q9C093 1822 aa11.48□□□□□ -0.57
HDAC3-212ENST00000492407 SSC5DA1L4H1 1573 aa11.47□□□□□ -0.57
HDAC3-212ENST00000492407 CLRN2A0PK11 232 aa11.47□□□□□ -0.57
HDAC3-212ENST00000492407 MKRN3Q13064 507 aaKnown RBP11.47□□□□□ -0.57
HDAC3-212ENST00000492407 ALDH1L2Q3SY69 923 aa11.47□□□□□ -0.57
HDAC3-212ENST00000492407 FKBP1CQ5VVH2 108 aa11.47□□□□□ -0.57
HDAC3-212ENST00000492407 INTS3Q68E01 1043 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms