RNA–Protein interactions for RNA: ENST00000492331.1

MCF2L2-213, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2

Gene MCF2L2, Length 661 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-213ENST00000492331 DLGAP5Q15398 846 aa12.14□□□□□ -0.47
MCF2L2-213ENST00000492331 CAVIN4Q5BKX8 364 aa12.14□□□□□ -0.47
MCF2L2-213ENST00000492331 FAM84BQ96KN1 310 aaPredicted RBP12.14□□□□□ -0.47
MCF2L2-213ENST00000492331 MEIS3Q99687 375 aa12.14□□□□□ -0.47
MCF2L2-213ENST00000492331 BEGAINQ9BUH8 593 aa12.14□□□□□ -0.47
MCF2L2-213ENST00000492331 SIL1Q9H173 461 aa12.14□□□□□ -0.47
MCF2L2-213ENST00000492331 IQSEC3Q9UPP2 1182 aaPredicted RBP12.14□□□□□ -0.47
MCF2L2-213ENST00000492331 EYA2O00167 538 aa12.13□□□□□ -0.47
MCF2L2-213ENST00000492331 FOXN1O15353 648 aa12.13□□□□□ -0.47
MCF2L2-213ENST00000492331 AOC2O75106 756 aa12.13□□□□□ -0.47
MCF2L2-213ENST00000492331 GNAI3P08754 354 aa12.13□□□□□ -0.47
MCF2L2-213ENST00000492331 MAP2K1Q02750 393 aaPredicted RBP12.13□□□□□ -0.47
MCF2L2-213ENST00000492331 CHAF1AQ13111 956 aaPredicted RBP12.13□□□□□ -0.47
MCF2L2-213ENST00000492331 COL13A1Q5TAT6 717 aaPredicted RBP12.13□□□□□ -0.47
MCF2L2-213ENST00000492331 PRAMEF18Q5VWM3 479 aa12.13□□□□□ -0.47
MCF2L2-213ENST00000492331 INTS3Q68E01 1043 aaKnown RBP12.13□□□□□ -0.47
MCF2L2-213ENST00000492331 ATF7IPQ6VMQ6 1270 aa12.13□□□□□ -0.47
MCF2L2-213ENST00000492331 CERS5Q8N5B7 392 aa12.13□□□□□ -0.47
MCF2L2-213ENST00000492331 TNNQ9UQP3 1299 aa12.13□□□□□ -0.47
MCF2L2-213ENST00000492331 ZNF646O15015 1829 aaPredicted RBP12.13□□□□□ -0.47
MCF2L2-213ENST00000492331 PITPNM2Q9BZ72 1349 aa12.12□□□□□ -0.47
MCF2L2-213ENST00000492331 IFIT1P09914 478 aaKnown RBP12.12□□□□□ -0.47
MCF2L2-213ENST00000492331 TRIM27P14373 513 aa12.12□□□□□ -0.47
MCF2L2-213ENST00000492331 RFX5P48382 616 aaPredicted RBP12.12□□□□□ -0.47
MCF2L2-213ENST00000492331 PTPN12Q05209 780 aaKnown RBP12.12□□□□□ -0.47
MCF2L2-213ENST00000492331 TTLL12Q14166 644 aaPredicted RBP12.12□□□□□ -0.47
MCF2L2-213ENST00000492331 MFSD14BQ5SR56 506 aa12.12□□□□□ -0.47
MCF2L2-213ENST00000492331 ZKSCAN2Q63HK3 967 aa12.12□□□□□ -0.47
MCF2L2-213ENST00000492331 TDRD7Q8NHU6 1098 aaKnown RBP12.12□□□□□ -0.47
MCF2L2-213ENST00000492331 HHIPL1Q96JK4 782 aa12.12□□□□□ -0.47
MCF2L2-213ENST00000492331 WBP1LQ9NX94 342 aa12.12□□□□□ -0.47
MCF2L2-213ENST00000492331 MYO1BO43795 1136 aa12.11□□□□□ -0.47
MCF2L2-213ENST00000492331 SLC5A1P13866 664 aa12.11□□□□□ -0.47
MCF2L2-213ENST00000492331 NF2P35240 595 aa12.11□□□□□ -0.47
MCF2L2-213ENST00000492331 MAP2K2P36507 400 aa12.11□□□□□ -0.47
MCF2L2-213ENST00000492331 CTCFP49711 727 aaPredicted RBP12.11□□□□□ -0.47
MCF2L2-213ENST00000492331 BCAMP50895 628 aa12.11□□□□□ -0.47
MCF2L2-213ENST00000492331 ZNF157P51786 506 aaPredicted RBP12.11□□□□□ -0.47
MCF2L2-213ENST00000492331 FKBP1AP62942 108 aaKnown RBP12.11□□□□□ -0.47
MCF2L2-213ENST00000492331 PUM3Q15397 648 aaKnown RBP12.11□□□□□ -0.47
MCF2L2-213ENST00000492331 CFAP100Q494V2 611 aa12.11□□□□□ -0.47
MCF2L2-213ENST00000492331 RGMBQ6NW40 437 aa12.11□□□□□ -0.47
MCF2L2-213ENST00000492331 FBXO33Q7Z6M2 555 aa12.11□□□□□ -0.47
MCF2L2-213ENST00000492331 VGLL2Q8N8G2 317 aa12.11□□□□□ -0.47
MCF2L2-213ENST00000492331 CEP126Q9P2H0 1117 aa12.11□□□□□ -0.47
MCF2L2-213ENST00000492331 TTF2Q9UNY4 1162 aaKnown RBP12.11□□□□□ -0.47
MCF2L2-213ENST00000492331 PCNTO95613 3336 aa12.11□□□□□ -0.47
MCF2L2-213ENST00000492331 ZBED9Q6R2W3 1325 aa12.11□□□□□ -0.47
MCF2L2-213ENST00000492331 FAM205AQ6ZU69 1335 aa12.11□□□□□ -0.47
MCF2L2-213ENST00000492331 PRKG1Q13976 671 aa12.1□□□□□ -0.47
MCF2L2-213ENST00000492331 ATG9AQ7Z3C6 839 aa12.1□□□□□ -0.47
MCF2L2-213ENST00000492331 APOBEC3FQ8IUX4 373 aaKnown RBP12.1□□□□□ -0.47
MCF2L2-213ENST00000492331 PA2G4Q9UQ80 394 aaKnown RBP12.1□□□□□ -0.47
MCF2L2-213ENST00000492331 PCDHAC2Q9Y5I4 1007 aa12.1□□□□□ -0.47
MCF2L2-213ENST00000492331 CLRN2A0PK11 232 aa12.09□□□□□ -0.47
MCF2L2-213ENST00000492331 SRGAP3O43295 1099 aa12.09□□□□□ -0.47
MCF2L2-213ENST00000492331 GNAI2P04899 355 aa12.09□□□□□ -0.47
MCF2L2-213ENST00000492331 LBX1P52954 281 aa12.09□□□□□ -0.47
MCF2L2-213ENST00000492331 NOGQ13253 232 aa12.09□□□□□ -0.47
MCF2L2-213ENST00000492331 IFFO2Q5TF58 517 aa12.09□□□□□ -0.47
MCF2L2-213ENST00000492331 FTSJ3Q8IY81 847 aaKnown RBP12.09□□□□□ -0.47
MCF2L2-213ENST00000492331 TNS4Q8IZW8 715 aa12.09□□□□□ -0.47
MCF2L2-213ENST00000492331 TMEM57Q8N5G2 664 aa12.09□□□□□ -0.47
MCF2L2-213ENST00000492331 LPIN2Q92539 896 aa12.09□□□□□ -0.47
MCF2L2-213ENST00000492331 CCDC102AQ96A19 550 aa12.09□□□□□ -0.47
MCF2L2-213ENST00000492331 PRMT6Q96LA8 375 aaPredicted RBP12.09□□□□□ -0.47
MCF2L2-213ENST00000492331 VEZTQ9HBM0 779 aa12.09□□□□□ -0.47
MCF2L2-213ENST00000492331 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.09□□□□□ -0.47
MCF2L2-213ENST00000492331 FBXO3Q9UK99 471 aa12.09□□□□□ -0.47
MCF2L2-213ENST00000492331 SPDYE2BA6NHP3 402 aa12.08□□□□□ -0.48
MCF2L2-213ENST00000492331 UBE2Q2LH0YL09 131 aa12.08□□□□□ -0.48
MCF2L2-213ENST00000492331 CIAO1O76071 339 aa12.08□□□□□ -0.48
MCF2L2-213ENST00000492331 SPDYE6P0CI01 402 aa12.08□□□□□ -0.48
MCF2L2-213ENST00000492331 FGFR2P21802 821 aa12.08□□□□□ -0.48
MCF2L2-213ENST00000492331 IL15P40933 162 aaPredicted RBP12.08□□□□□ -0.48
MCF2L2-213ENST00000492331 ATP2B3Q16720 1220 aa12.08□□□□□ -0.48
MCF2L2-213ENST00000492331 MOB2Q70IA6 237 aa12.08□□□□□ -0.48
MCF2L2-213ENST00000492331 MTMR14Q8NCE2 650 aa12.08□□□□□ -0.48
MCF2L2-213ENST00000492331 TBC1D22AQ8WUA7 517 aa12.08□□□□□ -0.48
MCF2L2-213ENST00000492331 ZBED3Q96IU2 234 aaPredicted RBP12.08□□□□□ -0.48
MCF2L2-213ENST00000492331 FKBP1BP68106 108 aa12.07□□□□□ -0.48
MCF2L2-213ENST00000492331 ZIC5Q96T25 663 aa12.07□□□□□ -0.48
MCF2L2-213ENST00000492331 DEFB129Q9H1M3 183 aa12.07□□□□□ -0.48
MCF2L2-213ENST00000492331 COPRSQ9NQ92 184 aa12.07□□□□□ -0.48
MCF2L2-213ENST00000492331 GNL3LQ9NVN8 582 aaKnown RBP12.07□□□□□ -0.48
MCF2L2-213ENST00000492331 TSKSQ9UJT2 592 aa12.07□□□□□ -0.48
MCF2L2-213ENST00000492331 HSPA8P11142 646 aaKnown RBP12.06□□□□□ -0.48
MCF2L2-213ENST00000492331 CRKP46108 304 aa12.06□□□□□ -0.48
MCF2L2-213ENST00000492331 KIF23Q02241 960 aaPredicted RBP12.06□□□□□ -0.48
MCF2L2-213ENST00000492331 GRIK5Q16478 980 aa12.06□□□□□ -0.48
MCF2L2-213ENST00000492331 ARMC9Q7Z3E5 817 aa12.06□□□□□ -0.48
MCF2L2-213ENST00000492331 ITPRIPQ8IWB1 547 aa12.06□□□□□ -0.48
MCF2L2-213ENST00000492331 DZIP1LQ8IYY4 767 aaKnown RBP12.06□□□□□ -0.48
MCF2L2-213ENST00000492331 TDRD3Q9H7E2 651 aaKnown RBP12.06□□□□□ -0.48
MCF2L2-213ENST00000492331 PRDM10Q9NQV6 1147 aa12.06□□□□□ -0.48
MCF2L2-213ENST00000492331 SERPINA10Q9UK55 444 aa12.06□□□□□ -0.48
MCF2L2-213ENST00000492331 FAM155AB1AL88 458 aaPredicted RBP12.05□□□□□ -0.48
MCF2L2-213ENST00000492331 CAPN15O75808 1086 aa12.05□□□□□ -0.48
MCF2L2-213ENST00000492331 TIMM10P62072 90 aa12.05□□□□□ -0.48
MCF2L2-213ENST00000492331 TFCP2Q12800 502 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms