RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 ABHD8Q96I13 439 aa10.59□□□□□ -0.71
SMARCB1-207ENST00000491967 FAM84BQ96KN1 310 aaPredicted RBP10.59□□□□□ -0.71
SMARCB1-207ENST00000491967 CSRNP1Q96S65 589 aa10.59□□□□□ -0.71
SMARCB1-207ENST00000491967 LAMB1P07942 1786 aa10.58□□□□□ -0.72
SMARCB1-207ENST00000491967 CCER2I3L3R5 266 aa10.58□□□□□ -0.72
SMARCB1-207ENST00000491967 CT47B1P0C2W7 299 aaPredicted RBP10.58□□□□□ -0.72
SMARCB1-207ENST00000491967 ZNF804AQ7Z570 1209 aa10.58□□□□□ -0.72
SMARCB1-207ENST00000491967 RASAL3Q86YV0 1011 aa10.58□□□□□ -0.72
SMARCB1-207ENST00000491967 KIAA0825Q8IV33 1275 aa10.58□□□□□ -0.72
SMARCB1-207ENST00000491967 VGLL2Q8N8G2 317 aa10.58□□□□□ -0.72
SMARCB1-207ENST00000491967 CDCA7LQ96GN5 454 aa10.58□□□□□ -0.72
SMARCB1-207ENST00000491967 PUS3Q9BZE2 481 aaKnown RBP10.58□□□□□ -0.72
SMARCB1-207ENST00000491967 BICC1Q9H694 974 aaKnown RBP10.58□□□□□ -0.72
SMARCB1-207ENST00000491967 RNF186Q9NXI6 227 aa10.58□□□□□ -0.72
SMARCB1-207ENST00000491967 HDAC9Q9UKV0 1011 aa10.58□□□□□ -0.72
SMARCB1-207ENST00000491967 MROH5Q6ZUA9 1318 aa10.58□□□□□ -0.72
SMARCB1-207ENST00000491967 COL1A1P02452 1464 aaPredicted RBP10.57□□□□□ -0.72
SMARCB1-207ENST00000491967 MAP3K11Q16584 847 aa10.57□□□□□ -0.72
SMARCB1-207ENST00000491967 PRAMEF18Q5VWM3 479 aa10.57□□□□□ -0.72
SMARCB1-207ENST00000491967 MOB2Q70IA6 237 aa10.57□□□□□ -0.72
SMARCB1-207ENST00000491967 FBXO33Q7Z6M2 555 aa10.57□□□□□ -0.72
SMARCB1-207ENST00000491967 APOBEC3FQ8IUX4 373 aaKnown RBP10.57□□□□□ -0.72
SMARCB1-207ENST00000491967 PRMT6Q96LA8 375 aaPredicted RBP10.57□□□□□ -0.72
SMARCB1-207ENST00000491967 CNNM1Q9NRU3 951 aa10.57□□□□□ -0.72
SMARCB1-207ENST00000491967 TSKSQ9UJT2 592 aa10.57□□□□□ -0.72
SMARCB1-207ENST00000491967 SCAF8Q9UPN6 1271 aaKnown RBP10.57□□□□□ -0.72
SMARCB1-207ENST00000491967 CHMP3Q9Y3E7 222 aa10.57□□□□□ -0.72
SMARCB1-207ENST00000491967 SPDYE2BA6NHP3 402 aa10.56□□□□□ -0.72
SMARCB1-207ENST00000491967 UNCXA6NJT0 531 aa10.56□□□□□ -0.72
SMARCB1-207ENST00000491967 UBE2Q2LH0YL09 131 aa10.56□□□□□ -0.72
SMARCB1-207ENST00000491967 SPDYE6P0CI01 402 aa10.56□□□□□ -0.72
SMARCB1-207ENST00000491967 HIBADHP31937 336 aaKnown RBP10.56□□□□□ -0.72
SMARCB1-207ENST00000491967 TM4SF4P48230 202 aa10.56□□□□□ -0.72
SMARCB1-207ENST00000491967 RFX5P48382 616 aaPredicted RBP10.56□□□□□ -0.72
SMARCB1-207ENST00000491967 DLGAP5Q15398 846 aa10.56□□□□□ -0.72
SMARCB1-207ENST00000491967 PPP2R3BQ9Y5P8 575 aa10.56□□□□□ -0.72
SMARCB1-207ENST00000491967 KIF16BQ96L93 1317 aa10.56□□□□□ -0.72
SMARCB1-207ENST00000491967 ARAP2Q8WZ64 1704 aa10.55□□□□□ -0.72
SMARCB1-207ENST00000491967 ZBTB22O15209 634 aa10.55□□□□□ -0.72
SMARCB1-207ENST00000491967 PDE8BO95263 885 aa10.55□□□□□ -0.72
SMARCB1-207ENST00000491967 FGFR2P21802 821 aa10.55□□□□□ -0.72
SMARCB1-207ENST00000491967 GYG1P46976 350 aa10.55□□□□□ -0.72
SMARCB1-207ENST00000491967 RGS19P49795 217 aa10.55□□□□□ -0.72
SMARCB1-207ENST00000491967 NOM1Q5C9Z4 860 aaKnown RBP10.55□□□□□ -0.72
SMARCB1-207ENST00000491967 TAF7LQ5H9L4 462 aa10.55□□□□□ -0.72
SMARCB1-207ENST00000491967 FBXW7Q969H0 707 aa10.55□□□□□ -0.72
SMARCB1-207ENST00000491967 MRIQ9BWK5 157 aa10.55□□□□□ -0.72
SMARCB1-207ENST00000491967 CFHR5Q9BXR6 569 aa10.55□□□□□ -0.72
SMARCB1-207ENST00000491967 DEFB129Q9H1M3 183 aa10.55□□□□□ -0.72
SMARCB1-207ENST00000491967 SERPINA10Q9UK55 444 aa10.55□□□□□ -0.72
SMARCB1-207ENST00000491967 PCDHAC2Q9Y5I4 1007 aa10.55□□□□□ -0.72
SMARCB1-207ENST00000491967 AOX1Q06278 1338 aa10.55□□□□□ -0.72
SMARCB1-207ENST00000491967 SSC5DA1L4H1 1573 aa10.54□□□□□ -0.72
SMARCB1-207ENST00000491967 PLIN1O60240 522 aa10.54□□□□□ -0.72
SMARCB1-207ENST00000491967 NF2P35240 595 aa10.54□□□□□ -0.72
SMARCB1-207ENST00000491967 HDLBPQ00341 1268 aaKnown RBP10.54□□□□□ -0.72
SMARCB1-207ENST00000491967 PTPN12Q05209 780 aaKnown RBP10.54□□□□□ -0.72
SMARCB1-207ENST00000491967 CFAP100Q494V2 611 aa10.54□□□□□ -0.72
SMARCB1-207ENST00000491967 LRRC24Q50LG9 513 aa10.54□□□□□ -0.72
SMARCB1-207ENST00000491967 MFSD14BQ5SR56 506 aa10.54□□□□□ -0.72
SMARCB1-207ENST00000491967 MCOLN1Q9GZU1 580 aa10.54□□□□□ -0.72
SMARCB1-207ENST00000491967 TRPA1O75762 1119 aa10.53□□□□□ -0.72
SMARCB1-207ENST00000491967 ARMC9Q7Z3E5 817 aa10.53□□□□□ -0.72
SMARCB1-207ENST00000491967 ARHGAP45Q92619 1136 aa10.53□□□□□ -0.72
SMARCB1-207ENST00000491967 FBXO3Q9UK99 471 aa10.53□□□□□ -0.72
SMARCB1-207ENST00000491967 MYO1BO43795 1136 aa10.52□□□□□ -0.73
SMARCB1-207ENST00000491967 SUPT20HL1Q3ZLR7 823 aa10.52□□□□□ -0.73
SMARCB1-207ENST00000491967 SPDYE2Q495Y8 402 aa10.52□□□□□ -0.73
SMARCB1-207ENST00000491967 SPRYD7Q5W111 196 aa10.52□□□□□ -0.73
SMARCB1-207ENST00000491967 ATG9AQ7Z3C6 839 aa10.52□□□□□ -0.73
SMARCB1-207ENST00000491967 TEPSINQ96N21 525 aa10.52□□□□□ -0.73
SMARCB1-207ENST00000491967 SMC4Q9NTJ3 1288 aa10.52□□□□□ -0.73
SMARCB1-207ENST00000491967 SUGT1Q9Y2Z0 365 aa10.52□□□□□ -0.73
SMARCB1-207ENST00000491967 EYA2O00167 538 aa10.51□□□□□ -0.73
SMARCB1-207ENST00000491967 USP2O75604 605 aaPredicted RBP10.51□□□□□ -0.73
SMARCB1-207ENST00000491967 CIAO1O76071 339 aa10.51□□□□□ -0.73
SMARCB1-207ENST00000491967 RARSP54136 660 aaKnown RBP10.51□□□□□ -0.73
SMARCB1-207ENST00000491967 PUM3Q15397 648 aaKnown RBP10.51□□□□□ -0.73
SMARCB1-207ENST00000491967 GRIK5Q16478 980 aa10.51□□□□□ -0.73
SMARCB1-207ENST00000491967 METTL24Q5JXM2 366 aa10.51□□□□□ -0.73
SMARCB1-207ENST00000491967 DZIP1LQ8IYY4 767 aaKnown RBP10.51□□□□□ -0.73
SMARCB1-207ENST00000491967 KLHDC4Q8TBB5 520 aa10.51□□□□□ -0.73
SMARCB1-207ENST00000491967 TBC1D22AQ8WUA7 517 aa10.51□□□□□ -0.73
SMARCB1-207ENST00000491967 ZNF70Q9UC06 446 aaPredicted RBP10.51□□□□□ -0.73
SMARCB1-207ENST00000491967 NOB1Q9ULX3 412 aaKnown RBP10.51□□□□□ -0.73
SMARCB1-207ENST00000491967 ANGEL1Q9UNK9 670 aaKnown RBP10.51□□□□□ -0.73
SMARCB1-207ENST00000491967 TTF2Q9UNY4 1162 aaKnown RBP10.51□□□□□ -0.73
SMARCB1-207ENST00000491967 JAG2Q9Y219 1238 aa10.51□□□□□ -0.73
SMARCB1-207ENST00000491967 CLRN2A0PK11 232 aa10.5□□□□□ -0.73
SMARCB1-207ENST00000491967 F8W031 263 aaPredicted RBP10.5□□□□□ -0.73
SMARCB1-207ENST00000491967 PPP1R12BO60237 982 aaPredicted RBP10.5□□□□□ -0.73
SMARCB1-207ENST00000491967 ZBTB48P10074 688 aaPredicted RBP10.5□□□□□ -0.73
SMARCB1-207ENST00000491967 CRKP46108 304 aa10.5□□□□□ -0.73
SMARCB1-207ENST00000491967 BCAMP50895 628 aa10.5□□□□□ -0.73
SMARCB1-207ENST00000491967 INHBEP58166 350 aa10.5□□□□□ -0.73
SMARCB1-207ENST00000491967 DGKZQ13574 1117 aa10.5□□□□□ -0.73
SMARCB1-207ENST00000491967 RASA3Q14644 834 aa10.5□□□□□ -0.73
SMARCB1-207ENST00000491967 CAVIN4Q5BKX8 364 aa10.5□□□□□ -0.73
SMARCB1-207ENST00000491967 NBPF12Q5TAG4 269 aaPredicted RBP10.5□□□□□ -0.73
SMARCB1-207ENST00000491967 FKBP1CQ5VVH2 108 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms