RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 DLGAP5Q15398 846 aa11.02□□□□□ -0.65
NUP50-217ENST00000491860 PKN2Q16513 984 aaKnown RBP11.02□□□□□ -0.65
NUP50-217ENST00000491860 NBPF9Q3BBW0 867 aa11.02□□□□□ -0.65
NUP50-217ENST00000491860 KIAA0825Q8IV33 1275 aa11.02□□□□□ -0.65
NUP50-217ENST00000491860 CSRNP1Q96S65 589 aa11.02□□□□□ -0.65
NUP50-217ENST00000491860 HDAC5Q9UQL6 1122 aa11.02□□□□□ -0.65
NUP50-217ENST00000491860 ASTN2O75129 1339 aaPredicted RBP11.02□□□□□ -0.65
NUP50-217ENST00000491860 WTIPA6NIX2 430 aaPredicted RBP11.01□□□□□ -0.65
NUP50-217ENST00000491860 TAF5LO75529 589 aa11.01□□□□□ -0.65
NUP50-217ENST00000491860 SASH1O94885 1247 aa11.01□□□□□ -0.65
NUP50-217ENST00000491860 TTLL12Q14166 644 aaPredicted RBP11.01□□□□□ -0.65
NUP50-217ENST00000491860 DLK2Q6UY11 383 aa11.01□□□□□ -0.65
NUP50-217ENST00000491860 MRPL50Q8N5N7 158 aaKnown RBP11.01□□□□□ -0.65
NUP50-217ENST00000491860 IRS2Q9Y4H2 1338 aa11.01□□□□□ -0.65
NUP50-217ENST00000491860 KLRK1P26718 216 aa11□□□□□ -0.65
NUP50-217ENST00000491860 TNFAIP1Q13829 316 aa11□□□□□ -0.65
NUP50-217ENST00000491860 RABL6Q3YEC7 729 aaPredicted RBP11□□□□□ -0.65
NUP50-217ENST00000491860 NOM1Q5C9Z4 860 aaKnown RBP11□□□□□ -0.65
NUP50-217ENST00000491860 RASAL3Q86YV0 1011 aa11□□□□□ -0.65
NUP50-217ENST00000491860 ZBED3Q96IU2 234 aaPredicted RBP11□□□□□ -0.65
NUP50-217ENST00000491860 FAM205AQ6ZU69 1335 aa11□□□□□ -0.65
NUP50-217ENST00000491860 CCER2I3L3R5 266 aa10.99□□□□□ -0.65
NUP50-217ENST00000491860 PPP1R12BO60237 982 aaPredicted RBP10.99□□□□□ -0.65
NUP50-217ENST00000491860 HIBADHP31937 336 aaKnown RBP10.99□□□□□ -0.65
NUP50-217ENST00000491860 SLFN5Q08AF3 891 aa10.99□□□□□ -0.65
NUP50-217ENST00000491860 SREBF2Q12772 1141 aa10.99□□□□□ -0.65
NUP50-217ENST00000491860 SUPT20HL1Q3ZLR7 823 aa10.99□□□□□ -0.65
NUP50-217ENST00000491860 CAVIN4Q5BKX8 364 aa10.99□□□□□ -0.65
NUP50-217ENST00000491860 EPHA10Q5JZY3 1008 aa10.99□□□□□ -0.65
NUP50-217ENST00000491860 VPS37DQ86XT2 251 aa10.99□□□□□ -0.65
NUP50-217ENST00000491860 HELBQ8NG08 1087 aaPredicted RBP10.99□□□□□ -0.65
NUP50-217ENST00000491860 TBC1D22AQ8WUA7 517 aa10.99□□□□□ -0.65
NUP50-217ENST00000491860 ZNF594Q96JF6 807 aaPredicted RBP10.99□□□□□ -0.65
NUP50-217ENST00000491860 MXD3Q9BW11 206 aa10.99□□□□□ -0.65
NUP50-217ENST00000491860 HPS5Q9UPZ3 1129 aa10.99□□□□□ -0.65
NUP50-217ENST00000491860 PLIN1O60240 522 aa10.98□□□□□ -0.65
NUP50-217ENST00000491860 NBPF7P0C2Y1 421 aaPredicted RBP10.98□□□□□ -0.65
NUP50-217ENST00000491860 INHBEP58166 350 aa10.98□□□□□ -0.65
NUP50-217ENST00000491860 TDRD7Q8NHU6 1098 aaKnown RBP10.98□□□□□ -0.65
NUP50-217ENST00000491860 SUCLG2Q96I99 432 aa10.98□□□□□ -0.65
NUP50-217ENST00000491860 DEFB129Q9H1M3 183 aa10.98□□□□□ -0.65
NUP50-217ENST00000491860 SERPINA10Q9UK55 444 aa10.98□□□□□ -0.65
NUP50-217ENST00000491860 FBXO3Q9UK99 471 aa10.98□□□□□ -0.65
NUP50-217ENST00000491860 KIF16BQ96L93 1317 aa10.98□□□□□ -0.65
NUP50-217ENST00000491860 ARAP2Q8WZ64 1704 aa10.98□□□□□ -0.65
NUP50-217ENST00000491860 SPDYE2BA6NHP3 402 aa10.97□□□□□ -0.65
NUP50-217ENST00000491860 UBE2Q2LH0YL09 131 aa10.97□□□□□ -0.65
NUP50-217ENST00000491860 ALDH1A1P00352 501 aa10.97□□□□□ -0.65
NUP50-217ENST00000491860 SPDYE6P0CI01 402 aa10.97□□□□□ -0.65
NUP50-217ENST00000491860 RBM5P52756 815 aaKnown RBP eCLIP10.97□□□□□ -0.65
NUP50-217ENST00000491860 MAP3K11Q16584 847 aa10.97□□□□□ -0.65
NUP50-217ENST00000491860 CFAP100Q494V2 611 aa10.97□□□□□ -0.65
NUP50-217ENST00000491860 METTL24Q5JXM2 366 aa10.97□□□□□ -0.65
NUP50-217ENST00000491860 SSH1Q8WYL5 1049 aa10.97□□□□□ -0.65
NUP50-217ENST00000491860 GCC1Q96CN9 775 aa10.97□□□□□ -0.65
NUP50-217ENST00000491860 BICC1Q9H694 974 aaKnown RBP10.97□□□□□ -0.65
NUP50-217ENST00000491860 SMC4Q9NTJ3 1288 aa10.97□□□□□ -0.65
NUP50-217ENST00000491860 SUGT1Q9Y2Z0 365 aa10.97□□□□□ -0.65
NUP50-217ENST00000491860 RIPOR2Q9Y4F9 1068 aa10.97□□□□□ -0.65
NUP50-217ENST00000491860 MAST3O60307 1309 aa10.96□□□□□ -0.65
NUP50-217ENST00000491860 FRAT2O75474 233 aaPredicted RBP10.96□□□□□ -0.65
NUP50-217ENST00000491860 PDE8BO95263 885 aa10.96□□□□□ -0.65
NUP50-217ENST00000491860 IFIT1P09914 478 aaKnown RBP10.96□□□□□ -0.65
NUP50-217ENST00000491860 IREB2P48200 963 aaKnown RBP10.96□□□□□ -0.65
NUP50-217ENST00000491860 TM4SF4P48230 202 aa10.96□□□□□ -0.65
NUP50-217ENST00000491860 HDLBPQ00341 1268 aaKnown RBP10.96□□□□□ -0.65
NUP50-217ENST00000491860 MFSD14BQ5SR56 506 aa10.96□□□□□ -0.65
NUP50-217ENST00000491860 CERS5Q8N5B7 392 aa10.96□□□□□ -0.65
NUP50-217ENST00000491860 KAZALD1Q96I82 304 aa10.96□□□□□ -0.65
NUP50-217ENST00000491860 FAM84BQ96KN1 310 aaPredicted RBP10.96□□□□□ -0.65
NUP50-217ENST00000491860 CFHR5Q9BXR6 569 aa10.96□□□□□ -0.65
NUP50-217ENST00000491860 API5Q9BZZ5 524 aaKnown RBP10.96□□□□□ -0.65
NUP50-217ENST00000491860 MANSC4A6NHS7 340 aaPredicted RBP10.95□□□□□ -0.66
NUP50-217ENST00000491860 F8W031 263 aaPredicted RBP10.95□□□□□ -0.66
NUP50-217ENST00000491860 SNAP23O00161 211 aa10.95□□□□□ -0.66
NUP50-217ENST00000491860 ZBTB48P10074 688 aaPredicted RBP10.95□□□□□ -0.66
NUP50-217ENST00000491860 TNNI2P48788 182 aa10.95□□□□□ -0.66
NUP50-217ENST00000491860 PUM3Q15397 648 aaKnown RBP10.95□□□□□ -0.66
NUP50-217ENST00000491860 LDLRAD1Q5T700 205 aa10.95□□□□□ -0.66
NUP50-217ENST00000491860 FBXO33Q7Z6M2 555 aa10.95□□□□□ -0.66
NUP50-217ENST00000491860 TRMT2AQ8IZ69 625 aaKnown RBP10.95□□□□□ -0.66
NUP50-217ENST00000491860 ZNF296Q8WUU4 475 aaPredicted RBP10.95□□□□□ -0.66
NUP50-217ENST00000491860 HOOK2Q96ED9 719 aa10.95□□□□□ -0.66
NUP50-217ENST00000491860 MRIQ9BWK5 157 aa10.95□□□□□ -0.66
NUP50-217ENST00000491860 USP44Q9H0E7 712 aa10.95□□□□□ -0.66
NUP50-217ENST00000491860 ANGEL1Q9UNK9 670 aaKnown RBP10.95□□□□□ -0.66
NUP50-217ENST00000491860 TTF2Q9UNY4 1162 aaKnown RBP10.95□□□□□ -0.66
NUP50-217ENST00000491860 UBTFL1P0CB47 393 aaPredicted RBP10.94□□□□□ -0.66
NUP50-217ENST00000491860 GYG1P46976 350 aa10.94□□□□□ -0.66
NUP50-217ENST00000491860 SPDYE2Q495Y8 402 aa10.94□□□□□ -0.66
NUP50-217ENST00000491860 PRAMEF18Q5VWM3 479 aa10.94□□□□□ -0.66
NUP50-217ENST00000491860 OTUD7BQ6GQQ9 843 aa10.94□□□□□ -0.66
NUP50-217ENST00000491860 FBXO46Q6PJ61 603 aaPredicted RBP10.94□□□□□ -0.66
NUP50-217ENST00000491860 ANKRD44Q8N8A2 993 aa10.94□□□□□ -0.66
NUP50-217ENST00000491860 SLC10A4Q96EP9 437 aa10.94□□□□□ -0.66
NUP50-217ENST00000491860 PUS3Q9BZE2 481 aaKnown RBP10.94□□□□□ -0.66
NUP50-217ENST00000491860 VEZTQ9HBM0 779 aa10.94□□□□□ -0.66
NUP50-217ENST00000491860 LAMB1P07942 1786 aa10.93□□□□□ -0.66
NUP50-217ENST00000491860 EYA2O00167 538 aa10.93□□□□□ -0.66
NUP50-217ENST00000491860 SLC5A1P13866 664 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms