RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 NBPF9Q3BBW0 867 aa17.02■□□□□ 0.32
CDK9-204ENST00000491521 KIAA0825Q8IV33 1275 aa17.02■□□□□ 0.32
CDK9-204ENST00000491521 CDCA5Q96FF9 252 aa17.02■□□□□ 0.32
CDK9-204ENST00000491521 PUS3Q9BZE2 481 aaKnown RBP17.02■□□□□ 0.32
CDK9-204ENST00000491521 CHMP4BQ9H444 224 aaKnown RBP17.02■□□□□ 0.32
CDK9-204ENST00000491521 GBA2Q9HCG7 927 aaPredicted RBP17.02■□□□□ 0.32
CDK9-204ENST00000491521 CD209Q9NNX6 404 aa17.02■□□□□ 0.32
CDK9-204ENST00000491521 ZNF609O15014 1411 aa17.02■□□□□ 0.31
CDK9-204ENST00000491521 SASH1O94885 1247 aa17.01■□□□□ 0.31
CDK9-204ENST00000491521 LBX1P52954 281 aa17.01■□□□□ 0.31
CDK9-204ENST00000491521 ZNF804AQ7Z570 1209 aa17.01■□□□□ 0.31
CDK9-204ENST00000491521 C2orf69Q8N8R5 385 aa17.01■□□□□ 0.31
CDK9-204ENST00000491521 BEGAINQ9BUH8 593 aa17.01■□□□□ 0.31
CDK9-204ENST00000491521 MYO3BQ8WXR4 1341 aa17■□□□□ 0.31
CDK9-204ENST00000491521 F8W031 263 aaPredicted RBP17■□□□□ 0.31
CDK9-204ENST00000491521 PRAMEF18Q5VWM3 479 aa17■□□□□ 0.31
CDK9-204ENST00000491521 TSKSQ9UJT2 592 aa17■□□□□ 0.31
CDK9-204ENST00000491521 THSD7BQ9C0I4 1608 aa16.99■□□□□ 0.31
CDK9-204ENST00000491521 UTYO14607 1347 aa16.99■□□□□ 0.31
CDK9-204ENST00000491521 ZBTB7BO15156 539 aaPredicted RBP16.99■□□□□ 0.31
CDK9-204ENST00000491521 ANKRD44Q8N8A2 993 aa16.99■□□□□ 0.31
CDK9-204ENST00000491521 HDAC9Q9UKV0 1011 aa16.99■□□□□ 0.31
CDK9-204ENST00000491521 GTF3C3Q9Y5Q9 886 aa16.99■□□□□ 0.31
CDK9-204ENST00000491521 IRS2Q9Y4H2 1338 aa16.98■□□□□ 0.31
CDK9-204ENST00000491521 HSPA8P11142 646 aaKnown RBP16.98■□□□□ 0.31
CDK9-204ENST00000491521 KLHDC4Q8TBB5 520 aa16.98■□□□□ 0.31
CDK9-204ENST00000491521 USP44Q9H0E7 712 aa16.98■□□□□ 0.31
CDK9-204ENST00000491521 WNT10BO00744 389 aa16.97■□□□□ 0.31
CDK9-204ENST00000491521 GNAI3P08754 354 aa16.97■□□□□ 0.31
CDK9-204ENST00000491521 MAP2K2P36507 400 aa16.97■□□□□ 0.31
CDK9-204ENST00000491521 GYG1P46976 350 aa16.97■□□□□ 0.31
CDK9-204ENST00000491521 ZNF157P51786 506 aaPredicted RBP16.97■□□□□ 0.31
CDK9-204ENST00000491521 LRRC24Q50LG9 513 aa16.97■□□□□ 0.31
CDK9-204ENST00000491521 METTL24Q5JXM2 366 aa16.97■□□□□ 0.31
CDK9-204ENST00000491521 C15orf52Q6ZUT6 534 aaKnown RBP16.97■□□□□ 0.31
CDK9-204ENST00000491521 CERS5Q8N5B7 392 aa16.97■□□□□ 0.31
CDK9-204ENST00000491521 HHIPL1Q96JK4 782 aa16.97■□□□□ 0.31
CDK9-204ENST00000491521 ZIC5Q96T25 663 aa16.97■□□□□ 0.31
CDK9-204ENST00000491521 UBTFL1P0CB47 393 aaPredicted RBP16.96■□□□□ 0.31
CDK9-204ENST00000491521 TTLL12Q14166 644 aaPredicted RBP16.96■□□□□ 0.31
CDK9-204ENST00000491521 RGMBQ6NW40 437 aa16.96■□□□□ 0.31
CDK9-204ENST00000491521 MEIS3Q99687 375 aa16.96■□□□□ 0.31
CDK9-204ENST00000491521 PRDM10Q9NQV6 1147 aa16.96■□□□□ 0.31
CDK9-204ENST00000491521 MROH5Q6ZUA9 1318 aa16.96■□□□□ 0.3
CDK9-204ENST00000491521 PITPNM2Q9BZ72 1349 aa16.96■□□□□ 0.3
CDK9-204ENST00000491521 IL1R1P14778 569 aa16.95■□□□□ 0.3
CDK9-204ENST00000491521 RABL6Q3YEC7 729 aaPredicted RBP16.95■□□□□ 0.3
CDK9-204ENST00000491521 ERICH6BQ5W0A0 696 aa16.95■□□□□ 0.3
CDK9-204ENST00000491521 MOB2Q70IA6 237 aa16.95■□□□□ 0.3
CDK9-204ENST00000491521 ZBTB40Q9NUA8 1239 aa16.95■□□□□ 0.3
CDK9-204ENST00000491521 RIPOR2Q9Y4F9 1068 aa16.95■□□□□ 0.3
CDK9-204ENST00000491521 PCDHAC2Q9Y5I4 1007 aa16.95■□□□□ 0.3
CDK9-204ENST00000491521 HIBADHP31937 336 aaKnown RBP16.94■□□□□ 0.3
CDK9-204ENST00000491521 AAMPQ13685 434 aa16.94■□□□□ 0.3
CDK9-204ENST00000491521 UBE4AQ14139 1066 aa16.94■□□□□ 0.3
CDK9-204ENST00000491521 DLGAP5Q15398 846 aa16.94■□□□□ 0.3
CDK9-204ENST00000491521 VPS37DQ86XT2 251 aa16.94■□□□□ 0.3
CDK9-204ENST00000491521 IQSEC3Q9UPP2 1182 aaPredicted RBP16.94■□□□□ 0.3
CDK9-204ENST00000491521 HDAC5Q9UQL6 1122 aa16.94■□□□□ 0.3
CDK9-204ENST00000491521 GNAI2P04899 355 aa16.93■□□□□ 0.3
CDK9-204ENST00000491521 RBM5P52756 815 aaKnown RBP eCLIP16.93■□□□□ 0.3
CDK9-204ENST00000491521 NOGQ13253 232 aa16.93■□□□□ 0.3
CDK9-204ENST00000491521 PRKG1Q13976 671 aa16.93■□□□□ 0.3
CDK9-204ENST00000491521 C1orf115Q9H7X2 142 aa16.93■□□□□ 0.3
CDK9-204ENST00000491521 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.93■□□□□ 0.3
CDK9-204ENST00000491521 FAM155AB1AL88 458 aaPredicted RBP16.92■□□□□ 0.3
CDK9-204ENST00000491521 UBE2Q2LH0YL09 131 aa16.92■□□□□ 0.3
CDK9-204ENST00000491521 CHAF1AQ13111 956 aaPredicted RBP16.92■□□□□ 0.3
CDK9-204ENST00000491521 CFAP100Q494V2 611 aa16.92■□□□□ 0.3
CDK9-204ENST00000491521 CCDC102AQ96A19 550 aa16.92■□□□□ 0.3
CDK9-204ENST00000491521 FAM84BQ96KN1 310 aaPredicted RBP16.92■□□□□ 0.3
CDK9-204ENST00000491521 PAPPA2Q9BXP8 1791 aa16.92■□□□□ 0.3
CDK9-204ENST00000491521 CLRN2A0PK11 232 aa16.91■□□□□ 0.3
CDK9-204ENST00000491521 FRAT2O75474 233 aaPredicted RBP16.91■□□□□ 0.3
CDK9-204ENST00000491521 NF2P35240 595 aa16.91■□□□□ 0.3
CDK9-204ENST00000491521 KIF23Q02241 960 aaPredicted RBP16.91■□□□□ 0.3
CDK9-204ENST00000491521 MFSD14BQ5SR56 506 aa16.91■□□□□ 0.3
CDK9-204ENST00000491521 APOBEC3FQ8IUX4 373 aaKnown RBP16.91■□□□□ 0.3
CDK9-204ENST00000491521 SIL1Q9H173 461 aa16.91■□□□□ 0.3
CDK9-204ENST00000491521 VEZTQ9HBM0 779 aa16.91■□□□□ 0.3
CDK9-204ENST00000491521 MMP14P50281 582 aa16.9■□□□□ 0.3
CDK9-204ENST00000491521 TDRD7Q8NHU6 1098 aaKnown RBP16.9■□□□□ 0.3
CDK9-204ENST00000491521 ZBED3Q96IU2 234 aaPredicted RBP16.9■□□□□ 0.3
CDK9-204ENST00000491521 PPP4R2Q9NY27 417 aa16.9■□□□□ 0.3
CDK9-204ENST00000491521 LRRFIP2Q9Y608 721 aaKnown RBP16.9■□□□□ 0.3
CDK9-204ENST00000491521 PDE8BO95263 885 aa16.89■□□□□ 0.29
CDK9-204ENST00000491521 SLC10A3P09131 477 aa16.89■□□□□ 0.29
CDK9-204ENST00000491521 MKRN3Q13064 507 aaKnown RBP16.89■□□□□ 0.29
CDK9-204ENST00000491521 CAVIN4Q5BKX8 364 aa16.89■□□□□ 0.29
CDK9-204ENST00000491521 RASAL3Q86YV0 1011 aa16.89■□□□□ 0.29
CDK9-204ENST00000491521 TTF2Q9UNY4 1162 aaKnown RBP16.89■□□□□ 0.29
CDK9-204ENST00000491521 FZD1Q9UP38 647 aa16.89■□□□□ 0.29
CDK9-204ENST00000491521 CASP8AP2Q9UKL3 1982 aa16.89■□□□□ 0.29
CDK9-204ENST00000491521 AOX1Q06278 1338 aa16.89■□□□□ 0.29
CDK9-204ENST00000491521 FAM205AQ6ZU69 1335 aa16.89■□□□□ 0.29
CDK9-204ENST00000491521 ECM29Q5VYK3 1845 aa16.89■□□□□ 0.29
CDK9-204ENST00000491521 SPDYE2BA6NHP3 402 aa16.88■□□□□ 0.29
CDK9-204ENST00000491521 EYA2O00167 538 aa16.88■□□□□ 0.29
CDK9-204ENST00000491521 MYO1BO43795 1136 aa16.88■□□□□ 0.29
CDK9-204ENST00000491521 SPDYE6P0CI01 402 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms