RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 JAG2Q9Y219 1238 aa10.38□□□□□ -0.75
LSM2-213ENST00000491421 FAM155AB1AL88 458 aaPredicted RBP10.37□□□□□ -0.75
LSM2-213ENST00000491421 F8W031 263 aaPredicted RBP10.37□□□□□ -0.75
LSM2-213ENST00000491421 HIBADHP31937 336 aaKnown RBP10.37□□□□□ -0.75
LSM2-213ENST00000491421 GYG1P46976 350 aa10.37□□□□□ -0.75
LSM2-213ENST00000491421 DLGAP5Q15398 846 aa10.37□□□□□ -0.75
LSM2-213ENST00000491421 METTL24Q5JXM2 366 aa10.37□□□□□ -0.75
LSM2-213ENST00000491421 PRAMEF18Q5VWM3 479 aa10.37□□□□□ -0.75
LSM2-213ENST00000491421 APOBEC3FQ8IUX4 373 aaKnown RBP10.37□□□□□ -0.75
LSM2-213ENST00000491421 ZBED3Q96IU2 234 aaPredicted RBP10.37□□□□□ -0.75
LSM2-213ENST00000491421 ZIC5Q96T25 663 aa10.37□□□□□ -0.75
LSM2-213ENST00000491421 RIPOR2Q9Y4F9 1068 aa10.37□□□□□ -0.75
LSM2-213ENST00000491421 SLC10A3P09131 477 aa10.36□□□□□ -0.75
LSM2-213ENST00000491421 NF2P35240 595 aa10.36□□□□□ -0.75
LSM2-213ENST00000491421 FKBP1AP62942 108 aaKnown RBP10.36□□□□□ -0.75
LSM2-213ENST00000491421 KIF23Q02241 960 aaPredicted RBP10.36□□□□□ -0.75
LSM2-213ENST00000491421 TTLL12Q14166 644 aaPredicted RBP10.36□□□□□ -0.75
LSM2-213ENST00000491421 LRRC24Q50LG9 513 aa10.36□□□□□ -0.75
LSM2-213ENST00000491421 VPS37DQ86XT2 251 aa10.36□□□□□ -0.75
LSM2-213ENST00000491421 TDRD7Q8NHU6 1098 aaKnown RBP10.36□□□□□ -0.75
LSM2-213ENST00000491421 KLHDC4Q8TBB5 520 aa10.36□□□□□ -0.75
LSM2-213ENST00000491421 FAM84BQ96KN1 310 aaPredicted RBP10.36□□□□□ -0.75
LSM2-213ENST00000491421 API5Q9BZZ5 524 aaKnown RBP10.36□□□□□ -0.75
LSM2-213ENST00000491421 NOB1Q9ULX3 412 aaKnown RBP10.36□□□□□ -0.75
LSM2-213ENST00000491421 FAM205AQ6ZU69 1335 aa10.35□□□□□ -0.75
LSM2-213ENST00000491421 ZNF646O15015 1829 aaPredicted RBP10.35□□□□□ -0.75
LSM2-213ENST00000491421 MYO1BO43795 1136 aa10.35□□□□□ -0.75
LSM2-213ENST00000491421 UBTFL1P0CB47 393 aaPredicted RBP10.35□□□□□ -0.75
LSM2-213ENST00000491421 RBM5P52756 815 aaKnown RBP eCLIP10.35□□□□□ -0.75
LSM2-213ENST00000491421 RARSP54136 660 aaKnown RBP10.35□□□□□ -0.75
LSM2-213ENST00000491421 CFAP100Q494V2 611 aa10.35□□□□□ -0.75
LSM2-213ENST00000491421 CAVIN4Q5BKX8 364 aa10.35□□□□□ -0.75
LSM2-213ENST00000491421 MOB2Q70IA6 237 aa10.35□□□□□ -0.75
LSM2-213ENST00000491421 MTMR14Q8NCE2 650 aa10.35□□□□□ -0.75
LSM2-213ENST00000491421 KIF16BQ96L93 1317 aa10.34□□□□□ -0.75
LSM2-213ENST00000491421 PAPPA2Q9BXP8 1791 aa10.34□□□□□ -0.75
LSM2-213ENST00000491421 SPDYE2BA6NHP3 402 aa10.34□□□□□ -0.75
LSM2-213ENST00000491421 UBE2Q2LH0YL09 131 aa10.34□□□□□ -0.75
LSM2-213ENST00000491421 FRAT2O75474 233 aaPredicted RBP10.34□□□□□ -0.75
LSM2-213ENST00000491421 PDE8BO95263 885 aa10.34□□□□□ -0.75
LSM2-213ENST00000491421 SPDYE6P0CI01 402 aa10.34□□□□□ -0.75
LSM2-213ENST00000491421 PUM3Q15397 648 aaKnown RBP10.34□□□□□ -0.75
LSM2-213ENST00000491421 MFSD14BQ5SR56 506 aa10.34□□□□□ -0.75
LSM2-213ENST00000491421 RASAL3Q86YV0 1011 aa10.34□□□□□ -0.75
LSM2-213ENST00000491421 VGLL2Q8N8G2 317 aa10.34□□□□□ -0.75
LSM2-213ENST00000491421 DEFB129Q9H1M3 183 aa10.34□□□□□ -0.75
LSM2-213ENST00000491421 PCDHAC2Q9Y5I4 1007 aa10.34□□□□□ -0.75
LSM2-213ENST00000491421 COL1A1P02452 1464 aaPredicted RBP10.34□□□□□ -0.75
LSM2-213ENST00000491421 A0A1B0GUL6 1792 aa10.34□□□□□ -0.75
LSM2-213ENST00000491421 CLRN2A0PK11 232 aa10.33□□□□□ -0.76
LSM2-213ENST00000491421 EYA2O00167 538 aa10.33□□□□□ -0.76
LSM2-213ENST00000491421 IFIT1P09914 478 aaKnown RBP10.33□□□□□ -0.76
LSM2-213ENST00000491421 RFX5P48382 616 aaPredicted RBP10.33□□□□□ -0.76
LSM2-213ENST00000491421 CHAF1AQ13111 956 aaPredicted RBP10.33□□□□□ -0.76
LSM2-213ENST00000491421 PRKG1Q13976 671 aa10.33□□□□□ -0.76
LSM2-213ENST00000491421 ARMC9Q7Z3E5 817 aa10.33□□□□□ -0.76
LSM2-213ENST00000491421 FBXO33Q7Z6M2 555 aa10.33□□□□□ -0.76
LSM2-213ENST00000491421 PRMT6Q96LA8 375 aaPredicted RBP10.33□□□□□ -0.76
LSM2-213ENST00000491421 VEZTQ9HBM0 779 aa10.33□□□□□ -0.76
LSM2-213ENST00000491421 SAGE1Q9NXZ1 904 aa10.33□□□□□ -0.76
LSM2-213ENST00000491421 TTF2Q9UNY4 1162 aaKnown RBP10.33□□□□□ -0.76
LSM2-213ENST00000491421 IQSEC3Q9UPP2 1182 aaPredicted RBP10.33□□□□□ -0.76
LSM2-213ENST00000491421 HDAC5Q9UQL6 1122 aa10.33□□□□□ -0.76
LSM2-213ENST00000491421 PPP2R3BQ9Y5P8 575 aa10.33□□□□□ -0.76
LSM2-213ENST00000491421 BCAMP50895 628 aa10.32□□□□□ -0.76
LSM2-213ENST00000491421 PTPN12Q05209 780 aaKnown RBP10.32□□□□□ -0.76
LSM2-213ENST00000491421 REM2Q8IYK8 340 aaPredicted RBP10.32□□□□□ -0.76
LSM2-213ENST00000491421 ARHGAP45Q92619 1136 aa10.32□□□□□ -0.76
LSM2-213ENST00000491421 CSRNP1Q96S65 589 aa10.32□□□□□ -0.76
LSM2-213ENST00000491421 RNF186Q9NXI6 227 aa10.32□□□□□ -0.76
LSM2-213ENST00000491421 SERPINA10Q9UK55 444 aa10.32□□□□□ -0.76
LSM2-213ENST00000491421 LRRFIP2Q9Y608 721 aaKnown RBP10.32□□□□□ -0.76
LSM2-213ENST00000491421 TRPA1O75762 1119 aa10.31□□□□□ -0.76
LSM2-213ENST00000491421 SLC5A1P13866 664 aa10.31□□□□□ -0.76
LSM2-213ENST00000491421 PRKCSHP14314 528 aaPredicted RBP10.31□□□□□ -0.76
LSM2-213ENST00000491421 FGFR2P21802 821 aa10.31□□□□□ -0.76
LSM2-213ENST00000491421 DIEXFQ68CQ4 756 aaKnown RBP10.31□□□□□ -0.76
LSM2-213ENST00000491421 ATG9AQ7Z3C6 839 aa10.31□□□□□ -0.76
LSM2-213ENST00000491421 MIER1Q8N108 512 aa10.31□□□□□ -0.76
LSM2-213ENST00000491421 TBC1D22AQ8WUA7 517 aa10.31□□□□□ -0.76
LSM2-213ENST00000491421 LPIN2Q92539 896 aa10.31□□□□□ -0.76
LSM2-213ENST00000491421 ABHD8Q96I13 439 aa10.31□□□□□ -0.76
LSM2-213ENST00000491421 MEIS3Q99687 375 aa10.31□□□□□ -0.76
LSM2-213ENST00000491421 SIL1Q9H173 461 aa10.31□□□□□ -0.76
LSM2-213ENST00000491421 ANGEL1Q9UNK9 670 aaKnown RBP10.31□□□□□ -0.76
LSM2-213ENST00000491421 AOX1Q06278 1338 aa10.31□□□□□ -0.76
LSM2-213ENST00000491421 POLR2AP24928 1970 aaKnown RBP10.3□□□□□ -0.76
LSM2-213ENST00000491421 IPO8O15397 1037 aaKnown RBP10.3□□□□□ -0.76
LSM2-213ENST00000491421 PPP1R12BO60237 982 aaPredicted RBP10.3□□□□□ -0.76
LSM2-213ENST00000491421 CIAO1O76071 339 aa10.3□□□□□ -0.76
LSM2-213ENST00000491421 CRKP46108 304 aa10.3□□□□□ -0.76
LSM2-213ENST00000491421 HNRNPUQ00839 825 aaKnown RBP eCLIP10.3□□□□□ -0.76
LSM2-213ENST00000491421 MKRN3Q13064 507 aaKnown RBP10.3□□□□□ -0.76
LSM2-213ENST00000491421 TNFAIP1Q13829 316 aa10.3□□□□□ -0.76
LSM2-213ENST00000491421 RASA3Q14644 834 aa10.3□□□□□ -0.76
LSM2-213ENST00000491421 SUPT20HL1Q3ZLR7 823 aa10.3□□□□□ -0.76
LSM2-213ENST00000491421 SPDYE2Q495Y8 402 aa10.3□□□□□ -0.76
LSM2-213ENST00000491421 LDLRAD1Q5T700 205 aa10.3□□□□□ -0.76
LSM2-213ENST00000491421 INTS3Q68E01 1043 aaKnown RBP10.3□□□□□ -0.76
LSM2-213ENST00000491421 DZIP1LQ8IYY4 767 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms