RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 ECM29Q5VYK3 1845 aa21.08■□□□□ 0.96
SRGAP3-209ENST00000490889 F8W031 263 aaPredicted RBP21.07■□□□□ 0.96
SRGAP3-209ENST00000490889 PLIN1O60240 522 aa21.07■□□□□ 0.96
SRGAP3-209ENST00000490889 DLGAP5Q15398 846 aa21.07■□□□□ 0.96
SRGAP3-209ENST00000490889 CCDC57Q2TAC2 916 aa21.07■□□□□ 0.96
SRGAP3-209ENST00000490889 SLC4A10Q6U841 1118 aa21.07■□□□□ 0.96
SRGAP3-209ENST00000490889 LDHAL6AQ6ZMR3 332 aa21.07■□□□□ 0.96
SRGAP3-209ENST00000490889 ZNF804AQ7Z570 1209 aa21.07■□□□□ 0.96
SRGAP3-209ENST00000490889 SUCLG2Q96I99 432 aa21.07■□□□□ 0.96
SRGAP3-209ENST00000490889 ZNF521Q96K83 1311 aa21.06■□□□□ 0.96
SRGAP3-209ENST00000490889 ALDH1L1O75891 902 aa21.06■□□□□ 0.96
SRGAP3-209ENST00000490889 TBC1D8O95759 1140 aa21.06■□□□□ 0.96
SRGAP3-209ENST00000490889 ZEB1P37275 1124 aaPredicted RBP21.06■□□□□ 0.96
SRGAP3-209ENST00000490889 MTMR14Q8NCE2 650 aa21.06■□□□□ 0.96
SRGAP3-209ENST00000490889 DEFB129Q9H1M3 183 aa21.06■□□□□ 0.96
SRGAP3-209ENST00000490889 C9orf78Q9NZ63 289 aaPredicted RBP21.06■□□□□ 0.96
SRGAP3-209ENST00000490889 COL1A1P02452 1464 aaPredicted RBP21.06■□□□□ 0.96
SRGAP3-209ENST00000490889 TM4SF4P48230 202 aa21.05■□□□□ 0.96
SRGAP3-209ENST00000490889 CFAP100Q494V2 611 aa21.05■□□□□ 0.96
SRGAP3-209ENST00000490889 TAF7LQ5H9L4 462 aa21.05■□□□□ 0.96
SRGAP3-209ENST00000490889 LDLRAD1Q5T700 205 aa21.05■□□□□ 0.96
SRGAP3-209ENST00000490889 CTU1Q7Z7A3 348 aaKnown RBP21.05■□□□□ 0.96
SRGAP3-209ENST00000490889 PUS3Q9BZE2 481 aaKnown RBP21.05■□□□□ 0.96
SRGAP3-209ENST00000490889 SRCIN1Q9C0H9 1055 aa21.05■□□□□ 0.96
SRGAP3-209ENST00000490889 CNNM1Q9NRU3 951 aa21.05■□□□□ 0.96
SRGAP3-209ENST00000490889 ANGEL1Q9UNK9 670 aaKnown RBP21.05■□□□□ 0.96
SRGAP3-209ENST00000490889 CLRN2A0PK11 232 aa21.04■□□□□ 0.96
SRGAP3-209ENST00000490889 FKBP1AP62942 108 aaKnown RBP21.04■□□□□ 0.96
SRGAP3-209ENST00000490889 ARMC9Q7Z3E5 817 aa21.04■□□□□ 0.96
SRGAP3-209ENST00000490889 PRMT6Q96LA8 375 aaPredicted RBP21.04■□□□□ 0.96
SRGAP3-209ENST00000490889 SPDYE2BA6NHP3 402 aa21.03■□□□□ 0.96
SRGAP3-209ENST00000490889 NBPF7P0C2Y1 421 aaPredicted RBP21.03■□□□□ 0.96
SRGAP3-209ENST00000490889 SPDYE6P0CI01 402 aa21.03■□□□□ 0.96
SRGAP3-209ENST00000490889 ZNF296Q8WUU4 475 aaPredicted RBP21.03■□□□□ 0.96
SRGAP3-209ENST00000490889 SOX10P56693 466 aa21.02■□□□□ 0.96
SRGAP3-209ENST00000490889 R3HDMLQ9H3Y0 253 aa21.02■□□□□ 0.96
SRGAP3-209ENST00000490889 FAM205AQ6ZU69 1335 aa21.02■□□□□ 0.95
SRGAP3-209ENST00000490889 GYG1P46976 350 aa21.01■□□□□ 0.95
SRGAP3-209ENST00000490889 SPRYD7Q5W111 196 aa21.01■□□□□ 0.95
SRGAP3-209ENST00000490889 TDRD7Q8NHU6 1098 aaKnown RBP21.01■□□□□ 0.95
SRGAP3-209ENST00000490889 UTYO14607 1347 aa21.01■□□□□ 0.95
SRGAP3-209ENST00000490889 ARAP2Q8WZ64 1704 aa21.01■□□□□ 0.95
SRGAP3-209ENST00000490889 GPR25O00155 361 aa21■□□□□ 0.95
SRGAP3-209ENST00000490889 UBE4AQ14139 1066 aa21■□□□□ 0.95
SRGAP3-209ENST00000490889 MAP3K11Q16584 847 aa21■□□□□ 0.95
SRGAP3-209ENST00000490889 MRPL50Q8N5N7 158 aaKnown RBP21■□□□□ 0.95
SRGAP3-209ENST00000490889 CLMNQ96JQ2 1002 aa21■□□□□ 0.95
SRGAP3-209ENST00000490889 VEZTQ9HBM0 779 aa21■□□□□ 0.95
SRGAP3-209ENST00000490889 RIPOR2Q9Y4F9 1068 aa21■□□□□ 0.95
SRGAP3-209ENST00000490889 SREBF2Q12772 1141 aa20.99■□□□□ 0.95
SRGAP3-209ENST00000490889 NBPF12Q5TAG4 269 aaPredicted RBP20.99■□□□□ 0.95
SRGAP3-209ENST00000490889 FAM84BQ96KN1 310 aaPredicted RBP20.99■□□□□ 0.95
SRGAP3-209ENST00000490889 BICC1Q9H694 974 aaKnown RBP20.99■□□□□ 0.95
SRGAP3-209ENST00000490889 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.99■□□□□ 0.95
SRGAP3-209ENST00000490889 PPP2R3BQ9Y5P8 575 aa20.99■□□□□ 0.95
SRGAP3-209ENST00000490889 LAMB1P07942 1786 aa20.98■□□□□ 0.95
SRGAP3-209ENST00000490889 MYO1BO43795 1136 aa20.98■□□□□ 0.95
SRGAP3-209ENST00000490889 RBM5P52756 815 aaKnown RBP eCLIP20.98■□□□□ 0.95
SRGAP3-209ENST00000490889 RABL6Q3YEC7 729 aaPredicted RBP20.98■□□□□ 0.95
SRGAP3-209ENST00000490889 MFSD14BQ5SR56 506 aa20.98■□□□□ 0.95
SRGAP3-209ENST00000490889 ANKRD44Q8N8A2 993 aa20.98■□□□□ 0.95
SRGAP3-209ENST00000490889 HPS5Q9UPZ3 1129 aa20.98■□□□□ 0.95
SRGAP3-209ENST00000490889 HIBADHP31937 336 aaKnown RBP20.97■□□□□ 0.95
SRGAP3-209ENST00000490889 RASA3Q14644 834 aa20.97■□□□□ 0.95
SRGAP3-209ENST00000490889 GRIK5Q16478 980 aa20.97■□□□□ 0.95
SRGAP3-209ENST00000490889 LRRC24Q50LG9 513 aa20.97■□□□□ 0.95
SRGAP3-209ENST00000490889 CFHR5Q9BXR6 569 aa20.97■□□□□ 0.95
SRGAP3-209ENST00000490889 TTF2Q9UNY4 1162 aaKnown RBP20.97■□□□□ 0.95
SRGAP3-209ENST00000490889 NOM1Q5C9Z4 860 aaKnown RBP20.96■□□□□ 0.95
SRGAP3-209ENST00000490889 SLC10A4Q96EP9 437 aa20.96■□□□□ 0.95
SRGAP3-209ENST00000490889 WNK4Q96J92 1243 aa20.96■□□□□ 0.95
SRGAP3-209ENST00000490889 OTOFQ9HC10 1997 aa20.96■□□□□ 0.95
SRGAP3-209ENST00000490889 PPP1R12BO60237 982 aaPredicted RBP20.95■□□□□ 0.94
SRGAP3-209ENST00000490889 SUPT20HL1Q3ZLR7 823 aa20.95■□□□□ 0.94
SRGAP3-209ENST00000490889 SPDYE2Q495Y8 402 aa20.95■□□□□ 0.94
SRGAP3-209ENST00000490889 CDAN1Q8IWY9 1227 aa20.95■□□□□ 0.94
SRGAP3-209ENST00000490889 TDRD3Q9H7E2 651 aaKnown RBP20.95■□□□□ 0.94
SRGAP3-209ENST00000490889 ZNF70Q9UC06 446 aaPredicted RBP20.95■□□□□ 0.94
SRGAP3-209ENST00000490889 MROH5Q6ZUA9 1318 aa20.95■□□□□ 0.94
SRGAP3-209ENST00000490889 HTTP42858 3142 aa20.95■□□□□ 0.94
SRGAP3-209ENST00000490889 USP2O75604 605 aaPredicted RBP20.94■□□□□ 0.94
SRGAP3-209ENST00000490889 GJA5P36382 358 aa20.94■□□□□ 0.94
SRGAP3-209ENST00000490889 FBXO33Q7Z6M2 555 aa20.94■□□□□ 0.94
SRGAP3-209ENST00000490889 VGLL2Q8N8G2 317 aa20.94■□□□□ 0.94
SRGAP3-209ENST00000490889 KLHDC4Q8TBB5 520 aa20.94■□□□□ 0.94
SRGAP3-209ENST00000490889 SSH1Q8WYL5 1049 aa20.94■□□□□ 0.94
SRGAP3-209ENST00000490889 SERPINA10Q9UK55 444 aa20.94■□□□□ 0.94
SRGAP3-209ENST00000490889 IQSEC3Q9UPP2 1182 aaPredicted RBP20.94■□□□□ 0.94
SRGAP3-209ENST00000490889 MANSC4A6NHS7 340 aaPredicted RBP20.93■□□□□ 0.94
SRGAP3-209ENST00000490889 IGF2BP3O00425 579 aaKnown RBP eCLIP20.93■□□□□ 0.94
SRGAP3-209ENST00000490889 ZBTB48P10074 688 aaPredicted RBP20.93■□□□□ 0.94
SRGAP3-209ENST00000490889 PKN2Q16513 984 aaKnown RBP20.93■□□□□ 0.94
SRGAP3-209ENST00000490889 IFNL1Q8IU54 200 aa20.93■□□□□ 0.94
SRGAP3-209ENST00000490889 FKTNO75072 461 aa20.92■□□□□ 0.94
SRGAP3-209ENST00000490889 DZIP1LQ8IYY4 767 aaKnown RBP20.92■□□□□ 0.94
SRGAP3-209ENST00000490889 TEPSINQ96N21 525 aa20.92■□□□□ 0.94
SRGAP3-209ENST00000490889 PTPRCP08575 1304 aa20.92■□□□□ 0.94
SRGAP3-209ENST00000490889 PDE4DIPQ5VU43 2346 aa20.92■□□□□ 0.94
SRGAP3-209ENST00000490889 CRKP46108 304 aa20.91■□□□□ 0.94
SRGAP3-209ENST00000490889 METTL24Q5JXM2 366 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms