RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 ZNRF3Q9ULT6 936 aa9.55□□□□□ -0.88
CLDN1-202ENST00000490800 ADGRG1Q9Y653 693 aa9.55□□□□□ -0.88
CLDN1-202ENST00000490800 TMEM88BA6NKF7 163 aa9.54□□□□□ -0.88
CLDN1-202ENST00000490800 IPO8O15397 1037 aaKnown RBP9.54□□□□□ -0.88
CLDN1-202ENST00000490800 TRIM27P14373 513 aa9.54□□□□□ -0.88
CLDN1-202ENST00000490800 KIAA2012Q0VF49 1180 aa9.54□□□□□ -0.88
CLDN1-202ENST00000490800 CCDC30Q5VVM6 783 aa9.54□□□□□ -0.88
CLDN1-202ENST00000490800 ATF7IPQ6VMQ6 1270 aa9.54□□□□□ -0.88
CLDN1-202ENST00000490800 METTL3Q86U44 580 aaKnown RBP9.54□□□□□ -0.88
CLDN1-202ENST00000490800 ARHGAP45Q92619 1136 aa9.54□□□□□ -0.88
CLDN1-202ENST00000490800 JARID2Q92833 1246 aaPredicted RBP9.54□□□□□ -0.88
CLDN1-202ENST00000490800 KCNK17Q96T54 332 aa9.54□□□□□ -0.88
CLDN1-202ENST00000490800 RBM27Q9P2N5 1060 aaKnown RBP9.54□□□□□ -0.88
CLDN1-202ENST00000490800 NSFL1CQ9UNZ2 370 aaKnown RBP9.54□□□□□ -0.88
CLDN1-202ENST00000490800 PPP1R3GB7ZBB8 358 aa9.53□□□□□ -0.88
CLDN1-202ENST00000490800 RAD17O75943 681 aa9.53□□□□□ -0.88
CLDN1-202ENST00000490800 OATP04181 439 aa9.53□□□□□ -0.88
CLDN1-202ENST00000490800 HSPA1AP0DMV8 641 aaKnown RBP9.53□□□□□ -0.88
CLDN1-202ENST00000490800 HSPA1BP0DMV9 641 aaKnown RBP9.53□□□□□ -0.88
CLDN1-202ENST00000490800 MS4A1P11836 297 aa9.53□□□□□ -0.88
CLDN1-202ENST00000490800 CLCN1P35523 988 aa9.53□□□□□ -0.88
CLDN1-202ENST00000490800 RPS8P62241 208 aaKnown RBP9.53□□□□□ -0.88
CLDN1-202ENST00000490800 FMR1Q06787 632 aaKnown RBP eCLIP9.53□□□□□ -0.88
CLDN1-202ENST00000490800 CIAPIN1Q6FI81 312 aa9.53□□□□□ -0.88
CLDN1-202ENST00000490800 USP50Q70EL3 339 aaPredicted RBP9.53□□□□□ -0.88
CLDN1-202ENST00000490800 TMC4Q7Z404 712 aa9.53□□□□□ -0.88
CLDN1-202ENST00000490800 DZIP1LQ8IYY4 767 aaKnown RBP9.53□□□□□ -0.88
CLDN1-202ENST00000490800 ZBTB38Q8NAP3 1195 aaPredicted RBP9.53□□□□□ -0.88
CLDN1-202ENST00000490800 CLUAP1Q96AJ1 413 aa9.53□□□□□ -0.88
CLDN1-202ENST00000490800 CHMP4AQ9BY43 222 aa9.53□□□□□ -0.88
CLDN1-202ENST00000490800 DAXXQ9UER7 740 aaPredicted RBP9.53□□□□□ -0.88
CLDN1-202ENST00000490800 COG6Q9Y2V7 657 aa9.53□□□□□ -0.88
CLDN1-202ENST00000490800 SCN4AP35499 1836 aa9.53□□□□□ -0.88
CLDN1-202ENST00000490800 C6orf229H3BNL8 230 aa9.52□□□□□ -0.89
CLDN1-202ENST00000490800 DDX58O95786 925 aaKnown RBP9.52□□□□□ -0.89
CLDN1-202ENST00000490800 VEGFBP49765 207 aa9.52□□□□□ -0.89
CLDN1-202ENST00000490800 GMPSP49915 693 aaPredicted RBP9.52□□□□□ -0.89
CLDN1-202ENST00000490800 GPSM2P81274 684 aa9.52□□□□□ -0.89
CLDN1-202ENST00000490800 WASHC4Q2M389 1173 aa9.52□□□□□ -0.89
CLDN1-202ENST00000490800 TTC13Q8NBP0 860 aa9.52□□□□□ -0.89
CLDN1-202ENST00000490800 CCDC191Q8NCU4 936 aa9.52□□□□□ -0.89
CLDN1-202ENST00000490800 DDRGK1Q96HY6 314 aa9.52□□□□□ -0.89
CLDN1-202ENST00000490800 METTL22Q9BUU2 404 aaPredicted RBP9.52□□□□□ -0.89
CLDN1-202ENST00000490800 REPIN1Q9BWE0 567 aaKnown RBP9.52□□□□□ -0.89
CLDN1-202ENST00000490800 GPCPD1Q9NPB8 672 aa9.52□□□□□ -0.89
CLDN1-202ENST00000490800 SEC31BQ9NQW1 1179 aa9.52□□□□□ -0.89
CLDN1-202ENST00000490800 GPRC5DQ9NZD1 345 aa9.52□□□□□ -0.89
CLDN1-202ENST00000490800 POLLQ9UGP5 575 aa9.52□□□□□ -0.89
CLDN1-202ENST00000490800 MAP3K2Q9Y2U5 619 aa9.52□□□□□ -0.89
CLDN1-202ENST00000490800 CACNA1FO60840 1977 aa9.52□□□□□ -0.89
CLDN1-202ENST00000490800 PI4KAP2A4QPH2 592 aa9.51□□□□□ -0.89
CLDN1-202ENST00000490800 YDJCA8MPS7 323 aa9.51□□□□□ -0.89
CLDN1-202ENST00000490800 PCCAP05165 728 aaPredicted RBP9.51□□□□□ -0.89
CLDN1-202ENST00000490800 TNIP1Q15025 636 aa9.51□□□□□ -0.89
CLDN1-202ENST00000490800 DEFB115Q30KQ5 88 aa9.51□□□□□ -0.89
CLDN1-202ENST00000490800 B4GALNT3Q6L9W6 998 aa9.51□□□□□ -0.89
CLDN1-202ENST00000490800 KSR2Q6VAB6 950 aa9.51□□□□□ -0.89
CLDN1-202ENST00000490800 G2E3Q7L622 706 aa9.51□□□□□ -0.89
CLDN1-202ENST00000490800 FTSJ3Q8IY81 847 aaKnown RBP9.51□□□□□ -0.89
CLDN1-202ENST00000490800 TMEM57Q8N5G2 664 aa9.51□□□□□ -0.89
CLDN1-202ENST00000490800 PI4KAP1Q8N8J0 262 aa9.51□□□□□ -0.89
CLDN1-202ENST00000490800 PXYLP1Q8TE99 480 aa9.51□□□□□ -0.89
CLDN1-202ENST00000490800 CCDC85AQ96PX6 553 aaPredicted RBP9.51□□□□□ -0.89
CLDN1-202ENST00000490800 STK31Q9BXU1 1019 aa9.51□□□□□ -0.89
CLDN1-202ENST00000490800 API5Q9BZZ5 524 aaKnown RBP9.51□□□□□ -0.89
CLDN1-202ENST00000490800 KCNQ5Q9NR82 932 aa9.51□□□□□ -0.89
CLDN1-202ENST00000490800 ADARB2Q9NS39 739 aaKnown RBP9.51□□□□□ -0.89
CLDN1-202ENST00000490800 CWC25Q9NXE8 425 aaPredicted RBP9.51□□□□□ -0.89
CLDN1-202ENST00000490800 PCDH10Q9P2E7 1040 aa9.51□□□□□ -0.89
CLDN1-202ENST00000490800 CNOT7Q9UIV1 285 aaKnown RBP9.51□□□□□ -0.89
CLDN1-202ENST00000490800 CNTNAP1P78357 1384 aa9.5□□□□□ -0.89
CLDN1-202ENST00000490800 TRAF5O00463 557 aa9.5□□□□□ -0.89
CLDN1-202ENST00000490800 PDE8AO60658 829 aa9.5□□□□□ -0.89
CLDN1-202ENST00000490800 IGKV5-2P06315 115 aa9.5□□□□□ -0.89
CLDN1-202ENST00000490800 HSP90B1P14625 803 aaKnown RBP9.5□□□□□ -0.89
CLDN1-202ENST00000490800 HIRAP54198 1017 aaPredicted RBP9.5□□□□□ -0.89
CLDN1-202ENST00000490800 MVPQ14764 893 aaKnown RBP9.5□□□□□ -0.89
CLDN1-202ENST00000490800 TBC1D16Q8TBP0 767 aa9.5□□□□□ -0.89
CLDN1-202ENST00000490800 GPR101Q96P66 508 aaPredicted RBP9.5□□□□□ -0.89
CLDN1-202ENST00000490800 DBNDD1Q9H9R9 158 aa9.5□□□□□ -0.89
CLDN1-202ENST00000490800 FAM198AQ9UFP1 575 aa9.5□□□□□ -0.89
CLDN1-202ENST00000490800 ABT1Q9ULW3 272 aaKnown RBP9.5□□□□□ -0.89
CLDN1-202ENST00000490800 PTPRCP08575 1304 aa9.5□□□□□ -0.89
CLDN1-202ENST00000490800 ANKRD36CQ5JPF3 1778 aa9.5□□□□□ -0.89
CLDN1-202ENST00000490800 TAF1P21675 1872 aa9.49□□□□□ -0.89
CLDN1-202ENST00000490800 LTBP1Q14766 1721 aa9.49□□□□□ -0.89
CLDN1-202ENST00000490800 SHTN1A0MZ66 631 aa9.49□□□□□ -0.89
CLDN1-202ENST00000490800 PSMD14O00487 310 aa9.49□□□□□ -0.89
CLDN1-202ENST00000490800 CCDC152Q4G0S7 254 aa9.49□□□□□ -0.89
CLDN1-202ENST00000490800 VARS2Q5ST30 1063 aaKnown RBP9.49□□□□□ -0.89
CLDN1-202ENST00000490800 CST9Q5W186 159 aa9.49□□□□□ -0.89
CLDN1-202ENST00000490800 EYA3Q99504 573 aa9.49□□□□□ -0.89
CLDN1-202ENST00000490800 ZC3H12CQ9C0D7 883 aaKnown RBP9.49□□□□□ -0.89
CLDN1-202ENST00000490800 ANKIB1Q9P2G1 1089 aa9.49□□□□□ -0.89
CLDN1-202ENST00000490800 TSKSQ9UJT2 592 aa9.49□□□□□ -0.89
CLDN1-202ENST00000490800 LAMB2P55268 1798 aa9.48□□□□□ -0.89
CLDN1-202ENST00000490800 ADAMTSL1Q8N6G6 1762 aa9.48□□□□□ -0.89
CLDN1-202ENST00000490800 RASSF10A6NK89 507 aa9.48□□□□□ -0.89
CLDN1-202ENST00000490800 H7C1D1 291 aa9.48□□□□□ -0.89
CLDN1-202ENST00000490800 ECE2O60344 883 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms