RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 MCOLN1Q9GZU1 580 aa13.04□□□□□ -0.32
TTC28-207ENST00000490475 RNF186Q9NXI6 227 aa13.04□□□□□ -0.32
TTC28-207ENST00000490475 ECM29Q5VYK3 1845 aa13.04□□□□□ -0.32
TTC28-207ENST00000490475 WTIPA6NIX2 430 aaPredicted RBP13.03□□□□□ -0.32
TTC28-207ENST00000490475 PPP1R12BO60237 982 aaPredicted RBP13.03□□□□□ -0.32
TTC28-207ENST00000490475 TRPA1O75762 1119 aa13.03□□□□□ -0.32
TTC28-207ENST00000490475 SASH1O94885 1247 aa13.03□□□□□ -0.32
TTC28-207ENST00000490475 ZBED3Q96IU2 234 aaPredicted RBP13.03□□□□□ -0.32
TTC28-207ENST00000490475 ZIC5Q96T25 663 aa13.03□□□□□ -0.32
TTC28-207ENST00000490475 MROH5Q6ZUA9 1318 aa13.03□□□□□ -0.32
TTC28-207ENST00000490475 A0A1B0GUL6 1792 aa13.02□□□□□ -0.32
TTC28-207ENST00000490475 TAF5LO75529 589 aa13.02□□□□□ -0.33
TTC28-207ENST00000490475 KLRK1P26718 216 aa13.02□□□□□ -0.33
TTC28-207ENST00000490475 RGS19P49795 217 aa13.02□□□□□ -0.33
TTC28-207ENST00000490475 INHBEP58166 350 aa13.02□□□□□ -0.33
TTC28-207ENST00000490475 TNFAIP1Q13829 316 aa13.02□□□□□ -0.33
TTC28-207ENST00000490475 PKN2Q16513 984 aaKnown RBP13.02□□□□□ -0.33
TTC28-207ENST00000490475 SUPT20HL1Q3ZLR7 823 aa13.02□□□□□ -0.33
TTC28-207ENST00000490475 NOM1Q5C9Z4 860 aaKnown RBP13.02□□□□□ -0.33
TTC28-207ENST00000490475 MXD3Q9BW11 206 aa13.02□□□□□ -0.33
TTC28-207ENST00000490475 UTYO14607 1347 aa13.02□□□□□ -0.33
TTC28-207ENST00000490475 IRS2Q9Y4H2 1338 aa13.02□□□□□ -0.33
TTC28-207ENST00000490475 UBE2Q2LH0YL09 131 aa13.01□□□□□ -0.33
TTC28-207ENST00000490475 ALDH1A1P00352 501 aa13.01□□□□□ -0.33
TTC28-207ENST00000490475 TM4SF4P48230 202 aa13.01□□□□□ -0.33
TTC28-207ENST00000490475 MLLT1Q03111 559 aaPredicted RBP13.01□□□□□ -0.33
TTC28-207ENST00000490475 HELBQ8NG08 1087 aaPredicted RBP13.01□□□□□ -0.33
TTC28-207ENST00000490475 DEFB129Q9H1M3 183 aa13.01□□□□□ -0.33
TTC28-207ENST00000490475 HDAC5Q9UQL6 1122 aa13.01□□□□□ -0.33
TTC28-207ENST00000490475 FAM205AQ6ZU69 1335 aa13.01□□□□□ -0.33
TTC28-207ENST00000490475 SPDYE2BA6NHP3 402 aa13□□□□□ -0.33
TTC28-207ENST00000490475 PLIN1O60240 522 aa13□□□□□ -0.33
TTC28-207ENST00000490475 SPDYE6P0CI01 402 aa13□□□□□ -0.33
TTC28-207ENST00000490475 HIBADHP31937 336 aaKnown RBP13□□□□□ -0.33
TTC28-207ENST00000490475 MAP3K11Q16584 847 aa13□□□□□ -0.33
TTC28-207ENST00000490475 CAVIN4Q5BKX8 364 aa13□□□□□ -0.33
TTC28-207ENST00000490475 CTU1Q7Z7A3 348 aaKnown RBP13□□□□□ -0.33
TTC28-207ENST00000490475 VPS37DQ86XT2 251 aa13□□□□□ -0.33
TTC28-207ENST00000490475 TBC1D22AQ8WUA7 517 aa13□□□□□ -0.33
TTC28-207ENST00000490475 SERPINA10Q9UK55 444 aa13□□□□□ -0.33
TTC28-207ENST00000490475 CT47B1P0C2W7 299 aaPredicted RBP12.99□□□□□ -0.33
TTC28-207ENST00000490475 ZBTB48P10074 688 aaPredicted RBP12.99□□□□□ -0.33
TTC28-207ENST00000490475 RBM5P52756 815 aaKnown RBP eCLIP12.99□□□□□ -0.33
TTC28-207ENST00000490475 ALDH1L2Q3SY69 923 aa12.99□□□□□ -0.33
TTC28-207ENST00000490475 RABL6Q3YEC7 729 aaPredicted RBP12.99□□□□□ -0.33
TTC28-207ENST00000490475 CFAP100Q494V2 611 aa12.99□□□□□ -0.33
TTC28-207ENST00000490475 EPHA10Q5JZY3 1008 aa12.99□□□□□ -0.33
TTC28-207ENST00000490475 LDLRAD1Q5T700 205 aa12.99□□□□□ -0.33
TTC28-207ENST00000490475 TDRD7Q8NHU6 1098 aaKnown RBP12.99□□□□□ -0.33
TTC28-207ENST00000490475 CFHR5Q9BXR6 569 aa12.99□□□□□ -0.33
TTC28-207ENST00000490475 ANGEL1Q9UNK9 670 aaKnown RBP12.99□□□□□ -0.33
TTC28-207ENST00000490475 ZBED9Q6R2W3 1325 aa12.98□□□□□ -0.33
TTC28-207ENST00000490475 MANSC4A6NHS7 340 aaPredicted RBP12.98□□□□□ -0.33
TTC28-207ENST00000490475 IREB2P48200 963 aaKnown RBP12.98□□□□□ -0.33
TTC28-207ENST00000490475 RARSP54136 660 aaKnown RBP12.98□□□□□ -0.33
TTC28-207ENST00000490475 MFSD14BQ5SR56 506 aa12.98□□□□□ -0.33
TTC28-207ENST00000490475 PRAMEF18Q5VWM3 479 aa12.98□□□□□ -0.33
TTC28-207ENST00000490475 CERS5Q8N5B7 392 aa12.98□□□□□ -0.33
TTC28-207ENST00000490475 SLC10A4Q96EP9 437 aa12.98□□□□□ -0.33
TTC28-207ENST00000490475 SUCLG2Q96I99 432 aa12.98□□□□□ -0.33
TTC28-207ENST00000490475 ZNF594Q96JF6 807 aaPredicted RBP12.98□□□□□ -0.33
TTC28-207ENST00000490475 SMC4Q9NTJ3 1288 aa12.98□□□□□ -0.33
TTC28-207ENST00000490475 RIPOR2Q9Y4F9 1068 aa12.98□□□□□ -0.33
TTC28-207ENST00000490475 KIF16BQ96L93 1317 aa12.97□□□□□ -0.33
TTC28-207ENST00000490475 SNAP23O00161 211 aa12.97□□□□□ -0.33
TTC28-207ENST00000490475 FRAT2O75474 233 aaPredicted RBP12.97□□□□□ -0.33
TTC28-207ENST00000490475 NBPF7P0C2Y1 421 aaPredicted RBP12.97□□□□□ -0.33
TTC28-207ENST00000490475 TNNI2P48788 182 aa12.97□□□□□ -0.33
TTC28-207ENST00000490475 HDLBPQ00341 1268 aaKnown RBP12.97□□□□□ -0.33
TTC28-207ENST00000490475 PTPN12Q05209 780 aaKnown RBP12.97□□□□□ -0.33
TTC28-207ENST00000490475 SPRYD7Q5W111 196 aa12.97□□□□□ -0.33
TTC28-207ENST00000490475 OTUD7BQ6GQQ9 843 aa12.97□□□□□ -0.33
TTC28-207ENST00000490475 MOB2Q70IA6 237 aa12.97□□□□□ -0.33
TTC28-207ENST00000490475 BICC1Q9H694 974 aaKnown RBP12.97□□□□□ -0.33
TTC28-207ENST00000490475 NOB1Q9ULX3 412 aaKnown RBP12.97□□□□□ -0.33
TTC28-207ENST00000490475 SUGT1Q9Y2Z0 365 aa12.97□□□□□ -0.33
TTC28-207ENST00000490475 ARAP2Q8WZ64 1704 aa12.96□□□□□ -0.33
TTC28-207ENST00000490475 MAST3O60307 1309 aa12.96□□□□□ -0.33
TTC28-207ENST00000490475 F8W031 263 aaPredicted RBP12.96□□□□□ -0.33
TTC28-207ENST00000490475 PDE8BO95263 885 aa12.96□□□□□ -0.33
TTC28-207ENST00000490475 IFIT1P09914 478 aaKnown RBP12.96□□□□□ -0.33
TTC28-207ENST00000490475 METTL24Q5JXM2 366 aa12.96□□□□□ -0.33
TTC28-207ENST00000490475 HOOK2Q96ED9 719 aa12.96□□□□□ -0.33
TTC28-207ENST00000490475 FAM84BQ96KN1 310 aaPredicted RBP12.96□□□□□ -0.33
TTC28-207ENST00000490475 MRIQ9BWK5 157 aa12.96□□□□□ -0.33
TTC28-207ENST00000490475 VEZTQ9HBM0 779 aa12.96□□□□□ -0.33
TTC28-207ENST00000490475 FBXO3Q9UK99 471 aa12.96□□□□□ -0.33
TTC28-207ENST00000490475 TTF2Q9UNY4 1162 aaKnown RBP12.96□□□□□ -0.33
TTC28-207ENST00000490475 SCAF8Q9UPN6 1271 aaKnown RBP12.96□□□□□ -0.33
TTC28-207ENST00000490475 BCAR3O75815 825 aa12.95□□□□□ -0.34
TTC28-207ENST00000490475 GYG1P46976 350 aa12.95□□□□□ -0.34
TTC28-207ENST00000490475 FBXO33Q7Z6M2 555 aa12.95□□□□□ -0.34
TTC28-207ENST00000490475 ANKRD13AQ8IZ07 590 aa12.95□□□□□ -0.34
TTC28-207ENST00000490475 KAZALD1Q96I82 304 aa12.95□□□□□ -0.34
TTC28-207ENST00000490475 PRMT6Q96LA8 375 aaPredicted RBP12.95□□□□□ -0.34
TTC28-207ENST00000490475 GPR25O00155 361 aa12.94□□□□□ -0.34
TTC28-207ENST00000490475 PRKG1Q13976 671 aa12.94□□□□□ -0.34
TTC28-207ENST00000490475 RASA3Q14644 834 aa12.94□□□□□ -0.34
TTC28-207ENST00000490475 PUM3Q15397 648 aaKnown RBP12.94□□□□□ -0.34
TTC28-207ENST00000490475 SPDYE2Q495Y8 402 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms