RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 ATF7IPQ6VMQ6 1270 aa21.78■■□□□ 1.08
SEC13-218ENST00000490283 LRRFIP2Q9Y608 721 aaKnown RBP21.78■■□□□ 1.08
SEC13-218ENST00000490283 F8W031 263 aaPredicted RBP21.77■■□□□ 1.08
SEC13-218ENST00000490283 BCAR3O75815 825 aa21.77■■□□□ 1.08
SEC13-218ENST00000490283 IFIT1P09914 478 aaKnown RBP21.77■■□□□ 1.08
SEC13-218ENST00000490283 PUM3Q15397 648 aaKnown RBP21.77■■□□□ 1.08
SEC13-218ENST00000490283 APOBEC3FQ8IUX4 373 aaKnown RBP21.77■■□□□ 1.08
SEC13-218ENST00000490283 TDRD7Q8NHU6 1098 aaKnown RBP21.77■■□□□ 1.08
SEC13-218ENST00000490283 FAM84BQ96KN1 310 aaPredicted RBP21.77■■□□□ 1.08
SEC13-218ENST00000490283 MEIS3Q99687 375 aa21.77■■□□□ 1.08
SEC13-218ENST00000490283 JAG2Q9Y219 1238 aa21.77■■□□□ 1.08
SEC13-218ENST00000490283 ZBED9Q6R2W3 1325 aa21.77■■□□□ 1.07
SEC13-218ENST00000490283 MYO1BO43795 1136 aa21.76■■□□□ 1.07
SEC13-218ENST00000490283 TRIM27P14373 513 aa21.76■■□□□ 1.07
SEC13-218ENST00000490283 NF2P35240 595 aa21.76■■□□□ 1.07
SEC13-218ENST00000490283 MAP2K2P36507 400 aa21.76■■□□□ 1.07
SEC13-218ENST00000490283 CERS5Q8N5B7 392 aa21.76■■□□□ 1.07
SEC13-218ENST00000490283 WBP1LQ9NX94 342 aa21.76■■□□□ 1.07
SEC13-218ENST00000490283 FBXO3Q9UK99 471 aa21.76■■□□□ 1.07
SEC13-218ENST00000490283 FAM205AQ6ZU69 1335 aa21.76■■□□□ 1.07
SEC13-218ENST00000490283 FOXN1O15353 648 aa21.75■■□□□ 1.07
SEC13-218ENST00000490283 RFX5P48382 616 aaPredicted RBP21.75■■□□□ 1.07
SEC13-218ENST00000490283 CTCFP49711 727 aaPredicted RBP21.75■■□□□ 1.07
SEC13-218ENST00000490283 PTPN12Q05209 780 aaKnown RBP21.75■■□□□ 1.07
SEC13-218ENST00000490283 MFSD14BQ5SR56 506 aa21.75■■□□□ 1.07
SEC13-218ENST00000490283 ZKSCAN2Q63HK3 967 aa21.75■■□□□ 1.07
SEC13-218ENST00000490283 VGLL2Q8N8G2 317 aa21.75■■□□□ 1.07
SEC13-218ENST00000490283 SLC5A1P13866 664 aa21.74■■□□□ 1.07
SEC13-218ENST00000490283 RBM5P52756 815 aaKnown RBP eCLIP21.74■■□□□ 1.07
SEC13-218ENST00000490283 FKBP1BP68106 108 aa21.74■■□□□ 1.07
SEC13-218ENST00000490283 RGMBQ6NW40 437 aa21.74■■□□□ 1.07
SEC13-218ENST00000490283 SIL1Q9H173 461 aa21.74■■□□□ 1.07
SEC13-218ENST00000490283 CIAO1O76071 339 aa21.73■■□□□ 1.07
SEC13-218ENST00000490283 NOGQ13253 232 aa21.73■■□□□ 1.07
SEC13-218ENST00000490283 CFAP100Q494V2 611 aa21.73■■□□□ 1.07
SEC13-218ENST00000490283 COL13A1Q5TAT6 717 aaPredicted RBP21.73■■□□□ 1.07
SEC13-218ENST00000490283 FBXO33Q7Z6M2 555 aa21.73■■□□□ 1.07
SEC13-218ENST00000490283 MTMR14Q8NCE2 650 aa21.73■■□□□ 1.07
SEC13-218ENST00000490283 CLUAP1Q96AJ1 413 aa21.73■■□□□ 1.07
SEC13-218ENST00000490283 CEP126Q9P2H0 1117 aa21.73■■□□□ 1.07
SEC13-218ENST00000490283 ZNF646O15015 1829 aaPredicted RBP21.73■■□□□ 1.07
SEC13-218ENST00000490283 AOC2O75106 756 aa21.72■■□□□ 1.07
SEC13-218ENST00000490283 CHAF1AQ13111 956 aaPredicted RBP21.72■■□□□ 1.07
SEC13-218ENST00000490283 TBC1D22AQ8WUA7 517 aa21.72■■□□□ 1.07
SEC13-218ENST00000490283 LPIN2Q92539 896 aa21.72■■□□□ 1.07
SEC13-218ENST00000490283 CCDC102AQ96A19 550 aa21.72■■□□□ 1.07
SEC13-218ENST00000490283 IL15P40933 162 aaPredicted RBP21.71■■□□□ 1.07
SEC13-218ENST00000490283 ZNF157P51786 506 aaPredicted RBP21.71■■□□□ 1.07
SEC13-218ENST00000490283 TTLL12Q14166 644 aaPredicted RBP21.71■■□□□ 1.07
SEC13-218ENST00000490283 IFFO2Q5TF58 517 aa21.71■■□□□ 1.07
SEC13-218ENST00000490283 FTSJ3Q8IY81 847 aaKnown RBP21.71■■□□□ 1.07
SEC13-218ENST00000490283 ZBED3Q96IU2 234 aaPredicted RBP21.71■■□□□ 1.07
SEC13-218ENST00000490283 TTF2Q9UNY4 1162 aaKnown RBP21.71■■□□□ 1.07
SEC13-218ENST00000490283 SCAF8Q9UPN6 1271 aaKnown RBP21.71■■□□□ 1.07
SEC13-218ENST00000490283 IQSEC3Q9UPP2 1182 aaPredicted RBP21.71■■□□□ 1.07
SEC13-218ENST00000490283 GNAI2P04899 355 aa21.7■■□□□ 1.06
SEC13-218ENST00000490283 FGFR2P21802 821 aa21.7■■□□□ 1.06
SEC13-218ENST00000490283 ATG9AQ7Z3C6 839 aa21.7■■□□□ 1.06
SEC13-218ENST00000490283 POLR2AP24928 1970 aaKnown RBP21.7■■□□□ 1.06
SEC13-218ENST00000490283 THSD7BQ9C0I4 1608 aa21.69■■□□□ 1.06
SEC13-218ENST00000490283 SPDYE2BA6NHP3 402 aa21.69■■□□□ 1.06
SEC13-218ENST00000490283 SRGAP3O43295 1099 aa21.69■■□□□ 1.06
SEC13-218ENST00000490283 SPDYE6P0CI01 402 aa21.69■■□□□ 1.06
SEC13-218ENST00000490283 BCAMP50895 628 aa21.69■■□□□ 1.06
SEC13-218ENST00000490283 ATP2B3Q16720 1220 aa21.69■■□□□ 1.06
SEC13-218ENST00000490283 TNS4Q8IZW8 715 aa21.69■■□□□ 1.06
SEC13-218ENST00000490283 COPRSQ9NQ92 184 aa21.69■■□□□ 1.06
SEC13-218ENST00000490283 PRDM10Q9NQV6 1147 aa21.69■■□□□ 1.06
SEC13-218ENST00000490283 SERPINA10Q9UK55 444 aa21.69■■□□□ 1.06
SEC13-218ENST00000490283 COL1A1P02452 1464 aaPredicted RBP21.69■■□□□ 1.06
SEC13-218ENST00000490283 CA12O43570 354 aa21.68■■□□□ 1.06
SEC13-218ENST00000490283 PRAMEF18Q5VWM3 479 aa21.68■■□□□ 1.06
SEC13-218ENST00000490283 VEZTQ9HBM0 779 aa21.68■■□□□ 1.06
SEC13-218ENST00000490283 GNL3LQ9NVN8 582 aaKnown RBP21.68■■□□□ 1.06
SEC13-218ENST00000490283 PPP2R3BQ9Y5P8 575 aa21.68■■□□□ 1.06
SEC13-218ENST00000490283 TMEM57Q8N5G2 664 aa21.67■■□□□ 1.06
SEC13-218ENST00000490283 PA2G4Q9UQ80 394 aaKnown RBP21.67■■□□□ 1.06
SEC13-218ENST00000490283 TNNQ9UQP3 1299 aa21.67■■□□□ 1.06
SEC13-218ENST00000490283 PCNTO95613 3336 aa21.67■■□□□ 1.06
SEC13-218ENST00000490283 PAPPA2Q9BXP8 1791 aa21.66■■□□□ 1.06
SEC13-218ENST00000490283 MAST3O60307 1309 aa21.66■■□□□ 1.06
SEC13-218ENST00000490283 CLRN2A0PK11 232 aa21.66■■□□□ 1.06
SEC13-218ENST00000490283 LBX1P52954 281 aa21.66■■□□□ 1.06
SEC13-218ENST00000490283 MTX1Q13505 466 aa21.66■■□□□ 1.06
SEC13-218ENST00000490283 ARMC9Q7Z3E5 817 aa21.66■■□□□ 1.06
SEC13-218ENST00000490283 PRMT6Q96LA8 375 aaPredicted RBP21.66■■□□□ 1.06
SEC13-218ENST00000490283 DEFB129Q9H1M3 183 aa21.66■■□□□ 1.06
SEC13-218ENST00000490283 SLC10A3P09131 477 aa21.65■■□□□ 1.06
SEC13-218ENST00000490283 HSPA8P11142 646 aaKnown RBP21.65■■□□□ 1.06
SEC13-218ENST00000490283 TNFAIP1Q13829 316 aa21.65■■□□□ 1.06
SEC13-218ENST00000490283 DZIP1LQ8IYY4 767 aaKnown RBP21.65■■□□□ 1.06
SEC13-218ENST00000490283 WDR66Q8TBY9 1149 aa21.65■■□□□ 1.06
SEC13-218ENST00000490283 SUGT1Q9Y2Z0 365 aa21.65■■□□□ 1.06
SEC13-218ENST00000490283 CRKP46108 304 aa21.64■■□□□ 1.05
SEC13-218ENST00000490283 PCDHAC2Q9Y5I4 1007 aa21.64■■□□□ 1.05
SEC13-218ENST00000490283 FAM155AB1AL88 458 aaPredicted RBP21.63■■□□□ 1.05
SEC13-218ENST00000490283 UBE2Q2LH0YL09 131 aa21.63■■□□□ 1.05
SEC13-218ENST00000490283 HDLBPQ00341 1268 aaKnown RBP21.63■■□□□ 1.05
SEC13-218ENST00000490283 SUPT20HL1Q3ZLR7 823 aa21.63■■□□□ 1.05
SEC13-218ENST00000490283 ITPRIPQ8IWB1 547 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms