RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 PPP2R3BQ9Y5P8 575 aa13.2□□□□□ -0.3
CHKB-211ENST00000489453 PLIN1O60240 522 aa13.19□□□□□ -0.3
CHKB-211ENST00000489453 RBM5P52756 815 aaKnown RBP eCLIP13.19□□□□□ -0.3
CHKB-211ENST00000489453 CCDC57Q2TAC2 916 aa13.19□□□□□ -0.3
CHKB-211ENST00000489453 NOM1Q5C9Z4 860 aaKnown RBP13.19□□□□□ -0.3
CHKB-211ENST00000489453 VEZTQ9HBM0 779 aa13.19□□□□□ -0.3
CHKB-211ENST00000489453 CNNM1Q9NRU3 951 aa13.19□□□□□ -0.3
CHKB-211ENST00000489453 OTOFQ9HC10 1997 aa13.18□□□□□ -0.3
CHKB-211ENST00000489453 MANSC4A6NHS7 340 aaPredicted RBP13.18□□□□□ -0.3
CHKB-211ENST00000489453 SUPT20HL1Q3ZLR7 823 aa13.18□□□□□ -0.3
CHKB-211ENST00000489453 CFAP100Q494V2 611 aa13.18□□□□□ -0.3
CHKB-211ENST00000489453 CCDC184Q52MB2 194 aa13.18□□□□□ -0.3
CHKB-211ENST00000489453 LDLRAD1Q5T700 205 aa13.18□□□□□ -0.3
CHKB-211ENST00000489453 FBXO46Q6PJ61 603 aaPredicted RBP13.18□□□□□ -0.3
CHKB-211ENST00000489453 MTMR14Q8NCE2 650 aa13.18□□□□□ -0.3
CHKB-211ENST00000489453 ZBED3Q96IU2 234 aaPredicted RBP13.18□□□□□ -0.3
CHKB-211ENST00000489453 MRS2Q9HD23 443 aa13.18□□□□□ -0.3
CHKB-211ENST00000489453 CLRN2A0PK11 232 aa13.17□□□□□ -0.3
CHKB-211ENST00000489453 F6X3S4 739 aa13.17□□□□□ -0.3
CHKB-211ENST00000489453 SNAP23O00161 211 aa13.17□□□□□ -0.3
CHKB-211ENST00000489453 ZBTB48P10074 688 aaPredicted RBP13.17□□□□□ -0.3
CHKB-211ENST00000489453 IREB2P48200 963 aaKnown RBP13.17□□□□□ -0.3
CHKB-211ENST00000489453 INHBEP58166 350 aa13.17□□□□□ -0.3
CHKB-211ENST00000489453 EXOSC9Q06265 439 aaKnown RBP13.17□□□□□ -0.3
CHKB-211ENST00000489453 NCBP3Q53F19 620 aaKnown RBP13.17□□□□□ -0.3
CHKB-211ENST00000489453 LMBR1LQ6UX01 489 aa13.17□□□□□ -0.3
CHKB-211ENST00000489453 C15orf52Q6ZUT6 534 aaKnown RBP13.17□□□□□ -0.3
CHKB-211ENST00000489453 CERS5Q8N5B7 392 aa13.17□□□□□ -0.3
CHKB-211ENST00000489453 C9orf78Q9NZ63 289 aaPredicted RBP13.17□□□□□ -0.3
CHKB-211ENST00000489453 FZD1Q9UP38 647 aa13.17□□□□□ -0.3
CHKB-211ENST00000489453 JAG2Q9Y219 1238 aa13.17□□□□□ -0.3
CHKB-211ENST00000489453 MYH13Q9UKX3 1938 aa13.16□□□□□ -0.3
CHKB-211ENST00000489453 GRM8O00222 908 aa13.16□□□□□ -0.3
CHKB-211ENST00000489453 VAMP4O75379 141 aa13.16□□□□□ -0.3
CHKB-211ENST00000489453 IL1R1P14778 569 aa13.16□□□□□ -0.3
CHKB-211ENST00000489453 FKBP1AP62942 108 aaKnown RBP13.16□□□□□ -0.3
CHKB-211ENST00000489453 FOXO4P98177 505 aa13.16□□□□□ -0.3
CHKB-211ENST00000489453 PRPF38BQ5VTL8 546 aaKnown RBP13.16□□□□□ -0.3
CHKB-211ENST00000489453 OTUD7BQ6GQQ9 843 aa13.16□□□□□ -0.3
CHKB-211ENST00000489453 LDHAL6AQ6ZMR3 332 aa13.16□□□□□ -0.3
CHKB-211ENST00000489453 WDR63Q8IWG1 891 aa13.16□□□□□ -0.3
CHKB-211ENST00000489453 WNK4Q96J92 1243 aa13.16□□□□□ -0.3
CHKB-211ENST00000489453 CFHR5Q9BXR6 569 aa13.16□□□□□ -0.3
CHKB-211ENST00000489453 SPDYE2BA6NHP3 402 aa13.15□□□□□ -0.3
CHKB-211ENST00000489453 SPDYE6P0CI01 402 aa13.15□□□□□ -0.3
CHKB-211ENST00000489453 TNFAIP1Q13829 316 aa13.15□□□□□ -0.3
CHKB-211ENST00000489453 MAP3K11Q16584 847 aa13.15□□□□□ -0.3
CHKB-211ENST00000489453 BEND3Q5T5X7 828 aa13.15□□□□□ -0.3
CHKB-211ENST00000489453 IFNL1Q8IU54 200 aa13.15□□□□□ -0.3
CHKB-211ENST00000489453 SSC5DA1L4H1 1573 aa13.15□□□□□ -0.3
CHKB-211ENST00000489453 IRS2Q9Y4H2 1338 aa13.14□□□□□ -0.31
CHKB-211ENST00000489453 AK9Q5TCS8 1911 aa13.14□□□□□ -0.31
CHKB-211ENST00000489453 UNCXA6NJT0 531 aa13.14□□□□□ -0.31
CHKB-211ENST00000489453 ANP32CO43423 234 aa13.14□□□□□ -0.31
CHKB-211ENST00000489453 SLC4A10Q6U841 1118 aa13.14□□□□□ -0.31
CHKB-211ENST00000489453 ZNF594Q96JF6 807 aaPredicted RBP13.14□□□□□ -0.31
CHKB-211ENST00000489453 CLMNQ96JQ2 1002 aa13.14□□□□□ -0.31
CHKB-211ENST00000489453 PRMT6Q96LA8 375 aaPredicted RBP13.14□□□□□ -0.31
CHKB-211ENST00000489453 R3HDMLQ9H3Y0 253 aa13.14□□□□□ -0.31
CHKB-211ENST00000489453 TRIM17Q9Y577 477 aa13.14□□□□□ -0.31
CHKB-211ENST00000489453 PCDHAC2Q9Y5I4 1007 aa13.14□□□□□ -0.31
CHKB-211ENST00000489453 RBBP6Q7Z6E9 1792 aaKnown RBP13.13□□□□□ -0.31
CHKB-211ENST00000489453 MFSD14BQ5SR56 506 aa13.13□□□□□ -0.31
CHKB-211ENST00000489453 NBPF12Q5TAG4 269 aaPredicted RBP13.13□□□□□ -0.31
CHKB-211ENST00000489453 VPS37DQ86XT2 251 aa13.13□□□□□ -0.31
CHKB-211ENST00000489453 ANKRD13AQ8IZ07 590 aa13.13□□□□□ -0.31
CHKB-211ENST00000489453 ERO1AQ96HE7 468 aa13.13□□□□□ -0.31
CHKB-211ENST00000489453 SRCIN1Q9C0H9 1055 aa13.13□□□□□ -0.31
CHKB-211ENST00000489453 TTF2Q9UNY4 1162 aaKnown RBP13.13□□□□□ -0.31
CHKB-211ENST00000489453 ALDH1L1O75891 902 aa13.12□□□□□ -0.31
CHKB-211ENST00000489453 HIBADHP31937 336 aaKnown RBP13.12□□□□□ -0.31
CHKB-211ENST00000489453 RASA3Q14644 834 aa13.12□□□□□ -0.31
CHKB-211ENST00000489453 EPHA10Q5JZY3 1008 aa13.12□□□□□ -0.31
CHKB-211ENST00000489453 PCDH10Q9P2E7 1040 aa13.12□□□□□ -0.31
CHKB-211ENST00000489453 FAM205AQ6ZU69 1335 aa13.12□□□□□ -0.31
CHKB-211ENST00000489453 IGF2BP3O00425 579 aaKnown RBP eCLIP13.11□□□□□ -0.31
CHKB-211ENST00000489453 FRAT2O75474 233 aaPredicted RBP13.11□□□□□ -0.31
CHKB-211ENST00000489453 GYG1P46976 350 aa13.11□□□□□ -0.31
CHKB-211ENST00000489453 TNNI2P48788 182 aa13.11□□□□□ -0.31
CHKB-211ENST00000489453 UBE4AQ14139 1066 aa13.11□□□□□ -0.31
CHKB-211ENST00000489453 SPDYE2Q495Y8 402 aa13.11□□□□□ -0.31
CHKB-211ENST00000489453 INTS3Q68E01 1043 aaKnown RBP13.11□□□□□ -0.31
CHKB-211ENST00000489453 OTOP1Q7RTM1 612 aa13.11□□□□□ -0.31
CHKB-211ENST00000489453 ELP3Q9H9T3 547 aa13.11□□□□□ -0.31
CHKB-211ENST00000489453 ZNF70Q9UC06 446 aaPredicted RBP13.11□□□□□ -0.31
CHKB-211ENST00000489453 SERPINA10Q9UK55 444 aa13.11□□□□□ -0.31
CHKB-211ENST00000489453 KIAA0100Q14667 2235 aaKnown RBP13.11□□□□□ -0.31
CHKB-211ENST00000489453 USP2O75604 605 aaPredicted RBP13.1□□□□□ -0.31
CHKB-211ENST00000489453 CRHR2Q13324 411 aa13.1□□□□□ -0.31
CHKB-211ENST00000489453 TDRD7Q8NHU6 1098 aaKnown RBP13.1□□□□□ -0.31
CHKB-211ENST00000489453 CD99L2Q8TCZ2 262 aa13.1□□□□□ -0.31
CHKB-211ENST00000489453 OPTNQ96CV9 577 aa13.1□□□□□ -0.31
CHKB-211ENST00000489453 TDRD3Q9H7E2 651 aaKnown RBP13.1□□□□□ -0.31
CHKB-211ENST00000489453 AOX1Q06278 1338 aa13.1□□□□□ -0.31
CHKB-211ENST00000489453 MROH5Q6ZUA9 1318 aa13.1□□□□□ -0.31
CHKB-211ENST00000489453 TCP10L2B9ZVM9 353 aa13.09□□□□□ -0.31
CHKB-211ENST00000489453 WDHD1O75717 1129 aaPredicted RBP13.09□□□□□ -0.31
CHKB-211ENST00000489453 CRKP46108 304 aa13.09□□□□□ -0.31
CHKB-211ENST00000489453 CHAF1AQ13111 956 aaPredicted RBP13.09□□□□□ -0.31
CHKB-211ENST00000489453 DZIP1LQ8IYY4 767 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms