RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 PUS3Q9BZE2 481 aaKnown RBP16.88■□□□□ 0.29
LMO4-203ENST00000489303 CD209Q9NNX6 404 aa16.88■□□□□ 0.29
LMO4-203ENST00000489303 NBPF9Q3BBW0 867 aa16.87■□□□□ 0.29
LMO4-203ENST00000489303 C2orf69Q8N8R5 385 aa16.87■□□□□ 0.29
LMO4-203ENST00000489303 MYOZ2Q9NPC6 264 aa16.87■□□□□ 0.29
LMO4-203ENST00000489303 RIPOR2Q9Y4F9 1068 aa16.87■□□□□ 0.29
LMO4-203ENST00000489303 ZNF609O15014 1411 aa16.87■□□□□ 0.29
LMO4-203ENST00000489303 TRIM27P14373 513 aa16.86■□□□□ 0.29
LMO4-203ENST00000489303 MMP14P50281 582 aa16.86■□□□□ 0.29
LMO4-203ENST00000489303 GTF2IP78347 998 aa16.86■□□□□ 0.29
LMO4-203ENST00000489303 KIF23Q02241 960 aaPredicted RBP16.86■□□□□ 0.29
LMO4-203ENST00000489303 DACT2Q5SW24 774 aa16.86■□□□□ 0.29
LMO4-203ENST00000489303 SULF1Q8IWU6 871 aa16.86■□□□□ 0.29
LMO4-203ENST00000489303 ZNF157P51786 506 aaPredicted RBP16.85■□□□□ 0.29
LMO4-203ENST00000489303 NOGQ13253 232 aa16.85■□□□□ 0.29
LMO4-203ENST00000489303 CLUAP1Q96AJ1 413 aa16.85■□□□□ 0.29
LMO4-203ENST00000489303 HDAC9Q9UKV0 1011 aa16.85■□□□□ 0.29
LMO4-203ENST00000489303 LRRFIP2Q9Y608 721 aaKnown RBP16.85■□□□□ 0.29
LMO4-203ENST00000489303 CCDC85CA6NKD9 419 aa16.84■□□□□ 0.29
LMO4-203ENST00000489303 LRRC24Q50LG9 513 aa16.84■□□□□ 0.29
LMO4-203ENST00000489303 VPS37DQ86XT2 251 aa16.84■□□□□ 0.29
LMO4-203ENST00000489303 FTSJ3Q8IY81 847 aaKnown RBP16.84■□□□□ 0.29
LMO4-203ENST00000489303 KLHDC4Q8TBB5 520 aa16.84■□□□□ 0.29
LMO4-203ENST00000489303 MEIS3Q99687 375 aa16.84■□□□□ 0.29
LMO4-203ENST00000489303 MCOLN1Q9GZU1 580 aa16.84■□□□□ 0.29
LMO4-203ENST00000489303 EYA2O00167 538 aa16.83■□□□□ 0.28
LMO4-203ENST00000489303 SASH1O94885 1247 aa16.83■□□□□ 0.28
LMO4-203ENST00000489303 PDE8BO95263 885 aa16.83■□□□□ 0.28
LMO4-203ENST00000489303 IL1R1P14778 569 aa16.83■□□□□ 0.28
LMO4-203ENST00000489303 HIBADHP31937 336 aaKnown RBP16.83■□□□□ 0.28
LMO4-203ENST00000489303 CAVIN4Q5BKX8 364 aa16.83■□□□□ 0.28
LMO4-203ENST00000489303 FBXO3Q9UK99 471 aa16.83■□□□□ 0.28
LMO4-203ENST00000489303 IRS2Q9Y4H2 1338 aa16.83■□□□□ 0.28
LMO4-203ENST00000489303 SLC10A3P09131 477 aa16.82■□□□□ 0.28
LMO4-203ENST00000489303 RFX5P48382 616 aaPredicted RBP16.82■□□□□ 0.28
LMO4-203ENST00000489303 CSRNP1Q96S65 589 aa16.82■□□□□ 0.28
LMO4-203ENST00000489303 PCDHAC2Q9Y5I4 1007 aa16.82■□□□□ 0.28
LMO4-203ENST00000489303 UBE2Q2LH0YL09 131 aa16.81■□□□□ 0.28
LMO4-203ENST00000489303 WNT10BO00744 389 aa16.81■□□□□ 0.28
LMO4-203ENST00000489303 FRAT2O75474 233 aaPredicted RBP16.81■□□□□ 0.28
LMO4-203ENST00000489303 TRPA1O75762 1119 aa16.81■□□□□ 0.28
LMO4-203ENST00000489303 GNAI2P04899 355 aa16.81■□□□□ 0.28
LMO4-203ENST00000489303 IFIT1P09914 478 aaKnown RBP16.81■□□□□ 0.28
LMO4-203ENST00000489303 GYG1P46976 350 aa16.81■□□□□ 0.28
LMO4-203ENST00000489303 PTPN12Q05209 780 aaKnown RBP16.81■□□□□ 0.28
LMO4-203ENST00000489303 PUM3Q15397 648 aaKnown RBP16.81■□□□□ 0.28
LMO4-203ENST00000489303 RASAL3Q86YV0 1011 aa16.81■□□□□ 0.28
LMO4-203ENST00000489303 KIAA0825Q8IV33 1275 aa16.81■□□□□ 0.28
LMO4-203ENST00000489303 RNF186Q9NXI6 227 aa16.81■□□□□ 0.28
LMO4-203ENST00000489303 A0A1B0GUL6 1792 aa16.81■□□□□ 0.28
LMO4-203ENST00000489303 CA12O43570 354 aa16.8■□□□□ 0.28
LMO4-203ENST00000489303 CIAO1O76071 339 aa16.8■□□□□ 0.28
LMO4-203ENST00000489303 FKBP1AP62942 108 aaKnown RBP16.8■□□□□ 0.28
LMO4-203ENST00000489303 DGKZQ13574 1117 aa16.8■□□□□ 0.28
LMO4-203ENST00000489303 DZIP1LQ8IYY4 767 aaKnown RBP16.8■□□□□ 0.28
LMO4-203ENST00000489303 TMEM57Q8N5G2 664 aa16.8■□□□□ 0.28
LMO4-203ENST00000489303 CCDC102AQ96A19 550 aa16.8■□□□□ 0.28
LMO4-203ENST00000489303 FAM84BQ96KN1 310 aaPredicted RBP16.8■□□□□ 0.28
LMO4-203ENST00000489303 SIL1Q9H173 461 aa16.8■□□□□ 0.28
LMO4-203ENST00000489303 CEP126Q9P2H0 1117 aa16.8■□□□□ 0.28
LMO4-203ENST00000489303 FZD1Q9UP38 647 aa16.8■□□□□ 0.28
LMO4-203ENST00000489303 SRGAP3O43295 1099 aa16.79■□□□□ 0.28
LMO4-203ENST00000489303 SLC5A1P13866 664 aa16.79■□□□□ 0.28
LMO4-203ENST00000489303 IL15P40933 162 aaPredicted RBP16.79■□□□□ 0.28
LMO4-203ENST00000489303 CERS5Q8N5B7 392 aa16.79■□□□□ 0.28
LMO4-203ENST00000489303 VGLL2Q8N8G2 317 aa16.79■□□□□ 0.28
LMO4-203ENST00000489303 TDRD7Q8NHU6 1098 aaKnown RBP16.79■□□□□ 0.28
LMO4-203ENST00000489303 TNNQ9UQP3 1299 aa16.79■□□□□ 0.28
LMO4-203ENST00000489303 JAG2Q9Y219 1238 aa16.79■□□□□ 0.28
LMO4-203ENST00000489303 AOX1Q06278 1338 aa16.78■□□□□ 0.28
LMO4-203ENST00000489303 PITPNM2Q9BZ72 1349 aa16.78■□□□□ 0.28
LMO4-203ENST00000489303 MS4A1P11836 297 aa16.78■□□□□ 0.28
LMO4-203ENST00000489303 PRKG1Q13976 671 aa16.78■□□□□ 0.28
LMO4-203ENST00000489303 LPIN2Q92539 896 aa16.78■□□□□ 0.28
LMO4-203ENST00000489303 COPRSQ9NQ92 184 aa16.78■□□□□ 0.28
LMO4-203ENST00000489303 PAPPA2Q9BXP8 1791 aa16.78■□□□□ 0.28
LMO4-203ENST00000489303 FAM205AQ6ZU69 1335 aa16.77■□□□□ 0.28
LMO4-203ENST00000489303 F8W031 263 aaPredicted RBP16.77■□□□□ 0.28
LMO4-203ENST00000489303 MKRN3Q13064 507 aaKnown RBP16.77■□□□□ 0.28
LMO4-203ENST00000489303 DLGAP5Q15398 846 aa16.77■□□□□ 0.28
LMO4-203ENST00000489303 MFSD14BQ5SR56 506 aa16.77■□□□□ 0.28
LMO4-203ENST00000489303 FBXO33Q7Z6M2 555 aa16.77■□□□□ 0.28
LMO4-203ENST00000489303 ITPRIPQ8IWB1 547 aa16.77■□□□□ 0.28
LMO4-203ENST00000489303 ZBED3Q96IU2 234 aaPredicted RBP16.77■□□□□ 0.28
LMO4-203ENST00000489303 MTX1Q13505 466 aa16.76■□□□□ 0.27
LMO4-203ENST00000489303 ATG9AQ7Z3C6 839 aa16.76■□□□□ 0.27
LMO4-203ENST00000489303 TBC1D22AQ8WUA7 517 aa16.76■□□□□ 0.27
LMO4-203ENST00000489303 PA2G4Q9UQ80 394 aaKnown RBP16.76■□□□□ 0.27
LMO4-203ENST00000489303 AKAP11Q9UKA4 1901 aa16.76■□□□□ 0.27
LMO4-203ENST00000489303 MYO1BO43795 1136 aa16.75■□□□□ 0.27
LMO4-203ENST00000489303 FGFR2P21802 821 aa16.75■□□□□ 0.27
LMO4-203ENST00000489303 BCAMP50895 628 aa16.75■□□□□ 0.27
LMO4-203ENST00000489303 RBM5P52756 815 aaKnown RBP eCLIP16.75■□□□□ 0.27
LMO4-203ENST00000489303 CHAF1AQ13111 956 aaPredicted RBP16.75■□□□□ 0.27
LMO4-203ENST00000489303 ATP2B3Q16720 1220 aa16.75■□□□□ 0.27
LMO4-203ENST00000489303 IQSEC3Q9UPP2 1182 aaPredicted RBP16.75■□□□□ 0.27
LMO4-203ENST00000489303 TTLL12Q14166 644 aaPredicted RBP16.74■□□□□ 0.27
LMO4-203ENST00000489303 APOBEC3FQ8IUX4 373 aaKnown RBP16.74■□□□□ 0.27
LMO4-203ENST00000489303 GNL3LQ9NVN8 582 aaKnown RBP16.74■□□□□ 0.27
LMO4-203ENST00000489303 SAGE1Q9NXZ1 904 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms