RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 TRAF5O00463 557 aa17.72■□□□□ 0.43
BRCA1-218ENST00000489037 RLBP1P12271 317 aa17.72■□□□□ 0.43
BRCA1-218ENST00000489037 ATP2B3Q16720 1220 aa17.72■□□□□ 0.43
BRCA1-218ENST00000489037 FBXO33Q7Z6M2 555 aa17.72■□□□□ 0.43
BRCA1-218ENST00000489037 GGA3Q9NZ52 723 aa17.72■□□□□ 0.43
BRCA1-218ENST00000489037 FAM205AQ6ZU69 1335 aa17.72■□□□□ 0.43
BRCA1-218ENST00000489037 CELF2O95319 508 aaKnown RBP17.71■□□□□ 0.43
BRCA1-218ENST00000489037 FGFR2P21802 821 aa17.71■□□□□ 0.43
BRCA1-218ENST00000489037 G3BP1Q13283 466 aaKnown RBP eCLIP17.71■□□□□ 0.43
BRCA1-218ENST00000489037 PANK1Q8TE04 598 aa17.71■□□□□ 0.43
BRCA1-218ENST00000489037 CHMP4BQ9H444 224 aaKnown RBP17.71■□□□□ 0.43
BRCA1-218ENST00000489037 ZNF408Q9H9D4 720 aa17.71■□□□□ 0.43
BRCA1-218ENST00000489037 MKRN1Q9UHC7 482 aaKnown RBP17.71■□□□□ 0.43
BRCA1-218ENST00000489037 JAG2Q9Y219 1238 aa17.71■□□□□ 0.43
BRCA1-218ENST00000489037 F8W031 263 aaPredicted RBP17.7■□□□□ 0.42
BRCA1-218ENST00000489037 ZBTB7BO15156 539 aaPredicted RBP17.7■□□□□ 0.42
BRCA1-218ENST00000489037 BCAMP50895 628 aa17.7■□□□□ 0.42
BRCA1-218ENST00000489037 MFSD14BQ5SR56 506 aa17.7■□□□□ 0.42
BRCA1-218ENST00000489037 ANGEL2Q5VTE6 544 aaKnown RBP17.7■□□□□ 0.42
BRCA1-218ENST00000489037 TBC1D22AQ8WUA7 517 aa17.7■□□□□ 0.42
BRCA1-218ENST00000489037 GNL3LQ9NVN8 582 aaKnown RBP17.7■□□□□ 0.42
BRCA1-218ENST00000489037 AKAP2Q9Y2D5 859 aa17.7■□□□□ 0.42
BRCA1-218ENST00000489037 ATP8B2P98198 1209 aa17.69■□□□□ 0.42
BRCA1-218ENST00000489037 FMR1Q06787 632 aaKnown RBP eCLIP17.69■□□□□ 0.42
BRCA1-218ENST00000489037 CHAF1AQ13111 956 aaPredicted RBP17.69■□□□□ 0.42
BRCA1-218ENST00000489037 DLGAP5Q15398 846 aa17.69■□□□□ 0.42
BRCA1-218ENST00000489037 DEFB115Q30KQ5 88 aa17.69■□□□□ 0.42
BRCA1-218ENST00000489037 IQSEC3Q9UPP2 1182 aaPredicted RBP17.69■□□□□ 0.42
BRCA1-218ENST00000489037 PITPNM2Q9BZ72 1349 aa17.69■□□□□ 0.42
BRCA1-218ENST00000489037 PNMA6EA0A0J9YXQ4 647 aa17.68■□□□□ 0.42
BRCA1-218ENST00000489037 WNT10BO00744 389 aa17.68■□□□□ 0.42
BRCA1-218ENST00000489037 OS9Q13438 667 aaPredicted RBP17.68■□□□□ 0.42
BRCA1-218ENST00000489037 CERS5Q8N5B7 392 aa17.68■□□□□ 0.42
BRCA1-218ENST00000489037 YTHDC1Q96MU7 727 aaKnown RBP17.68■□□□□ 0.42
BRCA1-218ENST00000489037 C1orf115Q9H7X2 142 aa17.68■□□□□ 0.42
BRCA1-218ENST00000489037 DDX19BQ9UMR2 479 aa17.68■□□□□ 0.42
BRCA1-218ENST00000489037 CEP350Q5VT06 3117 aa17.68■□□□□ 0.42
BRCA1-218ENST00000489037 MYO1BO43795 1136 aa17.67■□□□□ 0.42
BRCA1-218ENST00000489037 RBM5P52756 815 aaKnown RBP eCLIP17.67■□□□□ 0.42
BRCA1-218ENST00000489037 NBPF9Q3BBW0 867 aa17.67■□□□□ 0.42
BRCA1-218ENST00000489037 CST9Q5W186 159 aa17.67■□□□□ 0.42
BRCA1-218ENST00000489037 PAXIP1Q6ZW49 1069 aaPredicted RBP17.67■□□□□ 0.42
BRCA1-218ENST00000489037 ASTN2O75129 1339 aaPredicted RBP17.67■□□□□ 0.42
BRCA1-218ENST00000489037 CNTNAP1P78357 1384 aa17.66■□□□□ 0.42
BRCA1-218ENST00000489037 ADM5C9JUS6 153 aa17.66■□□□□ 0.42
BRCA1-218ENST00000489037 TFCP2Q12800 502 aa17.66■□□□□ 0.42
BRCA1-218ENST00000489037 MVPQ14764 893 aaKnown RBP17.66■□□□□ 0.42
BRCA1-218ENST00000489037 CFAP100Q494V2 611 aa17.66■□□□□ 0.42
BRCA1-218ENST00000489037 APOBEC3FQ8IUX4 373 aaKnown RBP17.66■□□□□ 0.42
BRCA1-218ENST00000489037 C2orf69Q8N8R5 385 aa17.66■□□□□ 0.42
BRCA1-218ENST00000489037 JMYQ8N9B5 988 aa17.66■□□□□ 0.42
BRCA1-218ENST00000489037 MTMR14Q8NCE2 650 aa17.66■□□□□ 0.42
BRCA1-218ENST00000489037 TTF2Q9UNY4 1162 aaKnown RBP17.66■□□□□ 0.42
BRCA1-218ENST00000489037 ECM29Q5VYK3 1845 aa17.65■□□□□ 0.42
BRCA1-218ENST00000489037 ARAP2Q8WZ64 1704 aa17.65■□□□□ 0.42
BRCA1-218ENST00000489037 RASSF10A6NK89 507 aa17.65■□□□□ 0.42
BRCA1-218ENST00000489037 ECE1P42892 770 aa17.65■□□□□ 0.42
BRCA1-218ENST00000489037 WDR66Q8TBY9 1149 aa17.65■□□□□ 0.42
BRCA1-218ENST00000489037 SSH3Q8TE77 659 aa17.65■□□□□ 0.42
BRCA1-218ENST00000489037 NEUROD6Q96NK8 337 aa17.65■□□□□ 0.42
BRCA1-218ENST00000489037 COG6Q9Y2V7 657 aa17.65■□□□□ 0.42
BRCA1-218ENST00000489037 TLL2Q9Y6L7 1015 aa17.65■□□□□ 0.42
BRCA1-218ENST00000489037 SURF6O75683 361 aaKnown RBP17.64■□□□□ 0.41
BRCA1-218ENST00000489037 TIMM10P62072 90 aa17.64■□□□□ 0.41
BRCA1-218ENST00000489037 POLA2Q14181 598 aa17.64■□□□□ 0.41
BRCA1-218ENST00000489037 PDE3AQ14432 1141 aa17.64■□□□□ 0.41
BRCA1-218ENST00000489037 GORABQ5T7V8 394 aa17.64■□□□□ 0.41
BRCA1-218ENST00000489037 CDCA5Q96FF9 252 aa17.64■□□□□ 0.41
BRCA1-218ENST00000489037 DENND2AQ9ULE3 1009 aa17.64■□□□□ 0.41
BRCA1-218ENST00000489037 SUGT1Q9Y2Z0 365 aa17.64■□□□□ 0.41
BRCA1-218ENST00000489037 MAST3O60307 1309 aa17.64■□□□□ 0.41
BRCA1-218ENST00000489037 A0A1B0GUL7 405 aa17.63■□□□□ 0.41
BRCA1-218ENST00000489037 SEMA3EO15041 775 aa17.63■□□□□ 0.41
BRCA1-218ENST00000489037 NF2P35240 595 aa17.63■□□□□ 0.41
BRCA1-218ENST00000489037 GBA2Q9HCG7 927 aaPredicted RBP17.63■□□□□ 0.41
BRCA1-218ENST00000489037 SERPINA10Q9UK55 444 aa17.63■□□□□ 0.41
BRCA1-218ENST00000489037 SPDYE2BA6NHP3 402 aa17.62■□□□□ 0.41
BRCA1-218ENST00000489037 SPDYE6P0CI01 402 aa17.62■□□□□ 0.41
BRCA1-218ENST00000489037 VEGFBP49765 207 aa17.62■□□□□ 0.41
BRCA1-218ENST00000489037 CCDC102BQ68D86 513 aa17.62■□□□□ 0.41
BRCA1-218ENST00000489037 SAPCD2Q86UD0 394 aa17.62■□□□□ 0.41
BRCA1-218ENST00000489037 XAGE2Q96GT9 111 aa17.62■□□□□ 0.41
BRCA1-218ENST00000489037 ZBED3Q96IU2 234 aaPredicted RBP17.62■□□□□ 0.41
BRCA1-218ENST00000489037 ADORA1P30542 326 aa17.61■□□□□ 0.41
BRCA1-218ENST00000489037 PHKA1P46020 1223 aa17.61■□□□□ 0.41
BRCA1-218ENST00000489037 HUNKP57058 714 aa17.61■□□□□ 0.41
BRCA1-218ENST00000489037 HDLBPQ00341 1268 aaKnown RBP17.61■□□□□ 0.41
BRCA1-218ENST00000489037 GRM1Q13255 1194 aa17.61■□□□□ 0.41
BRCA1-218ENST00000489037 CEP85Q6P2H3 762 aa17.61■□□□□ 0.41
BRCA1-218ENST00000489037 DLK2Q6UY11 383 aa17.61■□□□□ 0.41
BRCA1-218ENST00000489037 HHIPL1Q96JK4 782 aa17.61■□□□□ 0.41
BRCA1-218ENST00000489037 WDR33Q9C0J8 1336 aaKnown RBP17.61■□□□□ 0.41
BRCA1-218ENST00000489037 HMMRO75330 724 aa17.6■□□□□ 0.41
BRCA1-218ENST00000489037 CRKP46108 304 aa17.6■□□□□ 0.41
BRCA1-218ENST00000489037 HSP90AB4PQ58FF6 505 aa17.6■□□□□ 0.41
BRCA1-218ENST00000489037 RPAP2Q8IXW5 612 aaPredicted RBP17.6■□□□□ 0.41
BRCA1-218ENST00000489037 ZGPATQ8N5A5 531 aaKnown RBP17.6■□□□□ 0.41
BRCA1-218ENST00000489037 TEKT1Q969V4 418 aa17.6■□□□□ 0.41
BRCA1-218ENST00000489037 CAPNS2Q96L46 248 aa17.6■□□□□ 0.41
BRCA1-218ENST00000489037 PRMT6Q96LA8 375 aaPredicted RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms