RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 FKBP1BP68106 108 aa20.16■□□□□ 0.82
ERGIC3-217ENST00000488935 DLGAP5Q15398 846 aa20.16■□□□□ 0.82
ERGIC3-217ENST00000488935 CCDC57Q2TAC2 916 aa20.16■□□□□ 0.82
ERGIC3-217ENST00000488935 KAZALD1Q96I82 304 aa20.16■□□□□ 0.82
ERGIC3-217ENST00000488935 NBPF7P0C2Y1 421 aaPredicted RBP20.15■□□□□ 0.82
ERGIC3-217ENST00000488935 GYG1P46976 350 aa20.15■□□□□ 0.82
ERGIC3-217ENST00000488935 MLLT1Q03111 559 aaPredicted RBP20.15■□□□□ 0.82
ERGIC3-217ENST00000488935 CFAP100Q494V2 611 aa20.15■□□□□ 0.82
ERGIC3-217ENST00000488935 R3HDMLQ9H3Y0 253 aa20.15■□□□□ 0.82
ERGIC3-217ENST00000488935 ANGEL1Q9UNK9 670 aaKnown RBP20.15■□□□□ 0.82
ERGIC3-217ENST00000488935 ZEB1P37275 1124 aaPredicted RBP20.14■□□□□ 0.81
ERGIC3-217ENST00000488935 SOX10P56693 466 aa20.14■□□□□ 0.81
ERGIC3-217ENST00000488935 PRMT6Q96LA8 375 aaPredicted RBP20.14■□□□□ 0.81
ERGIC3-217ENST00000488935 SRCIN1Q9C0H9 1055 aa20.14■□□□□ 0.81
ERGIC3-217ENST00000488935 IL1R1P14778 569 aa20.13■□□□□ 0.81
ERGIC3-217ENST00000488935 NF2P35240 595 aa20.13■□□□□ 0.81
ERGIC3-217ENST00000488935 RBM5P52756 815 aaKnown RBP eCLIP20.13■□□□□ 0.81
ERGIC3-217ENST00000488935 ZNF804AQ7Z570 1209 aa20.13■□□□□ 0.81
ERGIC3-217ENST00000488935 APOBEC3FQ8IUX4 373 aaKnown RBP20.13■□□□□ 0.81
ERGIC3-217ENST00000488935 DEFB129Q9H1M3 183 aa20.13■□□□□ 0.81
ERGIC3-217ENST00000488935 VEZTQ9HBM0 779 aa20.13■□□□□ 0.81
ERGIC3-217ENST00000488935 IQSEC3Q9UPP2 1182 aaPredicted RBP20.13■□□□□ 0.81
ERGIC3-217ENST00000488935 C15orf52Q6ZUT6 534 aaKnown RBP20.12■□□□□ 0.81
ERGIC3-217ENST00000488935 CLMNQ96JQ2 1002 aa20.12■□□□□ 0.81
ERGIC3-217ENST00000488935 ALDH1L1O75891 902 aa20.11■□□□□ 0.81
ERGIC3-217ENST00000488935 RGS19P49795 217 aa20.11■□□□□ 0.81
ERGIC3-217ENST00000488935 ARMC9Q7Z3E5 817 aa20.11■□□□□ 0.81
ERGIC3-217ENST00000488935 MRPL50Q8N5N7 158 aaKnown RBP20.11■□□□□ 0.81
ERGIC3-217ENST00000488935 SSC5DA1L4H1 1573 aa20.1■□□□□ 0.81
ERGIC3-217ENST00000488935 GRIK5Q16478 980 aa20.1■□□□□ 0.81
ERGIC3-217ENST00000488935 LRRC24Q50LG9 513 aa20.1■□□□□ 0.81
ERGIC3-217ENST00000488935 NBPF12Q5TAG4 269 aaPredicted RBP20.1■□□□□ 0.81
ERGIC3-217ENST00000488935 KLHDC4Q8TBB5 520 aa20.1■□□□□ 0.81
ERGIC3-217ENST00000488935 ZNF296Q8WUU4 475 aaPredicted RBP20.1■□□□□ 0.81
ERGIC3-217ENST00000488935 BICC1Q9H694 974 aaKnown RBP20.1■□□□□ 0.81
ERGIC3-217ENST00000488935 ECM29Q5VYK3 1845 aa20.09■□□□□ 0.81
ERGIC3-217ENST00000488935 ZNF521Q96K83 1311 aa20.09■□□□□ 0.81
ERGIC3-217ENST00000488935 SPDYE2BA6NHP3 402 aa20.09■□□□□ 0.81
ERGIC3-217ENST00000488935 SPDYE6P0CI01 402 aa20.09■□□□□ 0.81
ERGIC3-217ENST00000488935 LDLRAD1Q5T700 205 aa20.09■□□□□ 0.81
ERGIC3-217ENST00000488935 CTU1Q7Z7A3 348 aaKnown RBP20.09■□□□□ 0.81
ERGIC3-217ENST00000488935 FAM84BQ96KN1 310 aaPredicted RBP20.09■□□□□ 0.81
ERGIC3-217ENST00000488935 TM4SF4P48230 202 aa20.08■□□□□ 0.81
ERGIC3-217ENST00000488935 CDAN1Q8IWY9 1227 aa20.08■□□□□ 0.81
ERGIC3-217ENST00000488935 HIBADHP31937 336 aaKnown RBP20.07■□□□□ 0.8
ERGIC3-217ENST00000488935 CHAF1AQ13111 956 aaPredicted RBP20.07■□□□□ 0.8
ERGIC3-217ENST00000488935 MFSD14BQ5SR56 506 aa20.07■□□□□ 0.8
ERGIC3-217ENST00000488935 SPRYD7Q5W111 196 aa20.07■□□□□ 0.8
ERGIC3-217ENST00000488935 ANKRD44Q8N8A2 993 aa20.07■□□□□ 0.8
ERGIC3-217ENST00000488935 MTMR14Q8NCE2 650 aa20.07■□□□□ 0.8
ERGIC3-217ENST00000488935 TDRD7Q8NHU6 1098 aaKnown RBP20.07■□□□□ 0.8
ERGIC3-217ENST00000488935 SSH1Q8WYL5 1049 aa20.07■□□□□ 0.8
ERGIC3-217ENST00000488935 SLC10A4Q96EP9 437 aa20.07■□□□□ 0.8
ERGIC3-217ENST00000488935 TDRD3Q9H7E2 651 aaKnown RBP20.07■□□□□ 0.8
ERGIC3-217ENST00000488935 TTF2Q9UNY4 1162 aaKnown RBP20.07■□□□□ 0.8
ERGIC3-217ENST00000488935 RIPOR2Q9Y4F9 1068 aa20.07■□□□□ 0.8
ERGIC3-217ENST00000488935 REM2Q8IYK8 340 aaPredicted RBP20.06■□□□□ 0.8
ERGIC3-217ENST00000488935 CDCA7LQ96GN5 454 aa20.06■□□□□ 0.8
ERGIC3-217ENST00000488935 GPR25O00155 361 aa20.05■□□□□ 0.8
ERGIC3-217ENST00000488935 MMP14P50281 582 aa20.05■□□□□ 0.8
ERGIC3-217ENST00000488935 UBE4AQ14139 1066 aa20.05■□□□□ 0.8
ERGIC3-217ENST00000488935 RASA3Q14644 834 aa20.05■□□□□ 0.8
ERGIC3-217ENST00000488935 HPS5Q9UPZ3 1129 aa20.05■□□□□ 0.8
ERGIC3-217ENST00000488935 FAM205AQ6ZU69 1335 aa20.04■□□□□ 0.8
ERGIC3-217ENST00000488935 TCP10L2B9ZVM9 353 aa20.04■□□□□ 0.8
ERGIC3-217ENST00000488935 MYO1BO43795 1136 aa20.04■□□□□ 0.8
ERGIC3-217ENST00000488935 USP2O75604 605 aaPredicted RBP20.04■□□□□ 0.8
ERGIC3-217ENST00000488935 GJA5P36382 358 aa20.04■□□□□ 0.8
ERGIC3-217ENST00000488935 WNK4Q96J92 1243 aa20.04■□□□□ 0.8
ERGIC3-217ENST00000488935 ZNF70Q9UC06 446 aaPredicted RBP20.04■□□□□ 0.8
ERGIC3-217ENST00000488935 FKBP1AP62942 108 aaKnown RBP20.03■□□□□ 0.8
ERGIC3-217ENST00000488935 METTL24Q5JXM2 366 aa20.03■□□□□ 0.8
ERGIC3-217ENST00000488935 UTYO14607 1347 aa20.02■□□□□ 0.8
ERGIC3-217ENST00000488935 TNRC18O15417 2968 aaPredicted RBP20.02■□□□□ 0.8
ERGIC3-217ENST00000488935 IGF2BP3O00425 579 aaKnown RBP eCLIP20.02■□□□□ 0.8
ERGIC3-217ENST00000488935 PPP1R12BO60237 982 aaPredicted RBP20.02■□□□□ 0.8
ERGIC3-217ENST00000488935 BCAMP50895 628 aa20.02■□□□□ 0.8
ERGIC3-217ENST00000488935 CACNB3P54284 484 aa20.02■□□□□ 0.8
ERGIC3-217ENST00000488935 SREBF2Q12772 1141 aa20.02■□□□□ 0.8
ERGIC3-217ENST00000488935 CRKP46108 304 aa20.01■□□□□ 0.79
ERGIC3-217ENST00000488935 RABL6Q3YEC7 729 aaPredicted RBP20.01■□□□□ 0.79
ERGIC3-217ENST00000488935 FBXO33Q7Z6M2 555 aa20.01■□□□□ 0.79
ERGIC3-217ENST00000488935 VPS37DQ86XT2 251 aa20.01■□□□□ 0.79
ERGIC3-217ENST00000488935 DZIP1LQ8IYY4 767 aaKnown RBP20.01■□□□□ 0.79
ERGIC3-217ENST00000488935 CNKSR2Q8WXI2 1034 aa20.01■□□□□ 0.79
ERGIC3-217ENST00000488935 TMEM39BQ9GZU3 492 aa20.01■□□□□ 0.79
ERGIC3-217ENST00000488935 USP44Q9H0E7 712 aa20.01■□□□□ 0.79
ERGIC3-217ENST00000488935 ELP3Q9H9T3 547 aa20.01■□□□□ 0.79
ERGIC3-217ENST00000488935 FRAT2O75474 233 aaPredicted RBP20■□□□□ 0.79
ERGIC3-217ENST00000488935 SLFN5Q08AF3 891 aa20■□□□□ 0.79
ERGIC3-217ENST00000488935 MAP3K11Q16584 847 aa20■□□□□ 0.79
ERGIC3-217ENST00000488935 SUPT20HL1Q3ZLR7 823 aa20■□□□□ 0.79
ERGIC3-217ENST00000488935 SPDYE2Q495Y8 402 aa20■□□□□ 0.79
ERGIC3-217ENST00000488935 IFNL1Q8IU54 200 aa20■□□□□ 0.79
ERGIC3-217ENST00000488935 OTOFQ9HC10 1997 aa20■□□□□ 0.79
ERGIC3-217ENST00000488935 MROH5Q6ZUA9 1318 aa20■□□□□ 0.79
ERGIC3-217ENST00000488935 COL1A1P02452 1464 aaPredicted RBP19.99■□□□□ 0.79
ERGIC3-217ENST00000488935 FKTNO75072 461 aa19.99■□□□□ 0.79
ERGIC3-217ENST00000488935 VGLL2Q8N8G2 317 aa19.99■□□□□ 0.79
ERGIC3-217ENST00000488935 PPP2R3BQ9Y5P8 575 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms