RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 SASH1O94885 1247 aa28.99■■■□□ 2.23
CUL4A-209ENST00000488558 LBX1P52954 281 aa28.99■■■□□ 2.23
CUL4A-209ENST00000488558 MTMR14Q8NCE2 650 aa28.99■■■□□ 2.23
CUL4A-209ENST00000488558 CCDC102AQ96A19 550 aa28.99■■■□□ 2.23
CUL4A-209ENST00000488558 NOB1Q9ULX3 412 aaKnown RBP28.99■■■□□ 2.23
CUL4A-209ENST00000488558 KIF16BQ96L93 1317 aa28.98■■■□□ 2.23
CUL4A-209ENST00000488558 RARSP54136 660 aaKnown RBP28.98■■■□□ 2.23
CUL4A-209ENST00000488558 APOBEC3FQ8IUX4 373 aaKnown RBP28.98■■■□□ 2.23
CUL4A-209ENST00000488558 TDRD7Q8NHU6 1098 aaKnown RBP28.98■■■□□ 2.23
CUL4A-209ENST00000488558 FAM155AB1AL88 458 aaPredicted RBP28.96■■■□□ 2.23
CUL4A-209ENST00000488558 HIBADHP31937 336 aaKnown RBP28.96■■■□□ 2.23
CUL4A-209ENST00000488558 LRRC24Q50LG9 513 aa28.96■■■□□ 2.23
CUL4A-209ENST00000488558 METTL24Q5JXM2 366 aa28.96■■■□□ 2.23
CUL4A-209ENST00000488558 VGLL2Q8N8G2 317 aa28.96■■■□□ 2.23
CUL4A-209ENST00000488558 ARHGAP45Q92619 1136 aa28.96■■■□□ 2.23
CUL4A-209ENST00000488558 FAM84BQ96KN1 310 aaPredicted RBP28.96■■■□□ 2.23
CUL4A-209ENST00000488558 PDE8BO95263 885 aa28.95■■■□□ 2.22
CUL4A-209ENST00000488558 UBTFL1P0CB47 393 aaPredicted RBP28.94■■■□□ 2.22
CUL4A-209ENST00000488558 GYG1P46976 350 aa28.94■■■□□ 2.22
CUL4A-209ENST00000488558 ZNF157P51786 506 aaPredicted RBP28.94■■■□□ 2.22
CUL4A-209ENST00000488558 DLGAP5Q15398 846 aa28.94■■■□□ 2.22
CUL4A-209ENST00000488558 HDAC5Q9UQL6 1122 aa28.94■■■□□ 2.22
CUL4A-209ENST00000488558 SLC10A3P09131 477 aa28.93■■■□□ 2.22
CUL4A-209ENST00000488558 RFX5P48382 616 aaPredicted RBP28.93■■■□□ 2.22
CUL4A-209ENST00000488558 NF2P35240 595 aa28.92■■■□□ 2.22
CUL4A-209ENST00000488558 DIEXFQ68CQ4 756 aaKnown RBP28.92■■■□□ 2.22
CUL4A-209ENST00000488558 KLHDC4Q8TBB5 520 aa28.92■■■□□ 2.22
CUL4A-209ENST00000488558 SCAF8Q9UPN6 1271 aaKnown RBP28.92■■■□□ 2.22
CUL4A-209ENST00000488558 MFSD14BQ5SR56 506 aa28.91■■■□□ 2.22
CUL4A-209ENST00000488558 FBXO33Q7Z6M2 555 aa28.91■■■□□ 2.22
CUL4A-209ENST00000488558 SPDYE2BA6NHP3 402 aa28.9■■■□□ 2.22
CUL4A-209ENST00000488558 EYA2O00167 538 aa28.9■■■□□ 2.22
CUL4A-209ENST00000488558 SPDYE6P0CI01 402 aa28.9■■■□□ 2.22
CUL4A-209ENST00000488558 FBXO3Q9UK99 471 aa28.9■■■□□ 2.22
CUL4A-209ENST00000488558 JAG2Q9Y219 1238 aa28.9■■■□□ 2.22
CUL4A-209ENST00000488558 F8W031 263 aaPredicted RBP28.89■■■□□ 2.22
CUL4A-209ENST00000488558 MYO1BO43795 1136 aa28.89■■■□□ 2.22
CUL4A-209ENST00000488558 PTPN12Q05209 780 aaKnown RBP28.89■■■□□ 2.22
CUL4A-209ENST00000488558 PUM3Q15397 648 aaKnown RBP28.89■■■□□ 2.22
CUL4A-209ENST00000488558 CFAP100Q494V2 611 aa28.89■■■□□ 2.22
CUL4A-209ENST00000488558 CAVIN4Q5BKX8 364 aa28.89■■■□□ 2.22
CUL4A-209ENST00000488558 VPS37DQ86XT2 251 aa28.89■■■□□ 2.22
CUL4A-209ENST00000488558 MIER1Q8N108 512 aa28.89■■■□□ 2.22
CUL4A-209ENST00000488558 ZIC5Q96T25 663 aa28.89■■■□□ 2.22
CUL4A-209ENST00000488558 PPP2R3BQ9Y5P8 575 aa28.89■■■□□ 2.22
CUL4A-209ENST00000488558 INTS3Q68E01 1043 aaKnown RBP28.88■■■□□ 2.21
CUL4A-209ENST00000488558 RASAL3Q86YV0 1011 aa28.88■■■□□ 2.21
CUL4A-209ENST00000488558 FGFR2P21802 821 aa28.87■■■□□ 2.21
CUL4A-209ENST00000488558 PRAMEF18Q5VWM3 479 aa28.87■■■□□ 2.21
CUL4A-209ENST00000488558 REM2Q8IYK8 340 aaPredicted RBP28.87■■■□□ 2.21
CUL4A-209ENST00000488558 SERPINA10Q9UK55 444 aa28.87■■■□□ 2.21
CUL4A-209ENST00000488558 MYH13Q9UKX3 1938 aa28.86■■■□□ 2.21
CUL4A-209ENST00000488558 KIF23Q02241 960 aaPredicted RBP28.86■■■□□ 2.21
CUL4A-209ENST00000488558 SAGE1Q9NXZ1 904 aa28.86■■■□□ 2.21
CUL4A-209ENST00000488558 AKAP11Q9UKA4 1901 aa28.86■■■□□ 2.21
CUL4A-209ENST00000488558 IPO8O15397 1037 aaKnown RBP28.85■■■□□ 2.21
CUL4A-209ENST00000488558 CIAO1O76071 339 aa28.85■■■□□ 2.21
CUL4A-209ENST00000488558 IFIT1P09914 478 aaKnown RBP28.85■■■□□ 2.21
CUL4A-209ENST00000488558 TBC1D22AQ8WUA7 517 aa28.85■■■□□ 2.21
CUL4A-209ENST00000488558 PRMT6Q96LA8 375 aaPredicted RBP28.85■■■□□ 2.21
CUL4A-209ENST00000488558 DEFB129Q9H1M3 183 aa28.85■■■□□ 2.21
CUL4A-209ENST00000488558 LRRFIP2Q9Y608 721 aaKnown RBP28.85■■■□□ 2.21
CUL4A-209ENST00000488558 MOB2Q70IA6 237 aa28.84■■■□□ 2.21
CUL4A-209ENST00000488558 ATG9AQ7Z3C6 839 aa28.84■■■□□ 2.21
CUL4A-209ENST00000488558 MEIS3Q99687 375 aa28.84■■■□□ 2.21
CUL4A-209ENST00000488558 TTF2Q9UNY4 1162 aaKnown RBP28.84■■■□□ 2.21
CUL4A-209ENST00000488558 PCDHAC2Q9Y5I4 1007 aa28.84■■■□□ 2.21
CUL4A-209ENST00000488558 TTLL12Q14166 644 aaPredicted RBP28.83■■■□□ 2.21
CUL4A-209ENST00000488558 LPIN2Q92539 896 aa28.83■■■□□ 2.21
CUL4A-209ENST00000488558 TSKSQ9UJT2 592 aa28.83■■■□□ 2.21
CUL4A-209ENST00000488558 UBE2Q2LH0YL09 131 aa28.82■■■□□ 2.2
CUL4A-209ENST00000488558 GNAI3P08754 354 aa28.82■■■□□ 2.2
CUL4A-209ENST00000488558 SLC5A1P13866 664 aa28.82■■■□□ 2.2
CUL4A-209ENST00000488558 HNRNPUQ00839 825 aaKnown RBP eCLIP28.82■■■□□ 2.2
CUL4A-209ENST00000488558 ARMC9Q7Z3E5 817 aa28.82■■■□□ 2.2
CUL4A-209ENST00000488558 SSC5DA1L4H1 1573 aa28.81■■■□□ 2.2
CUL4A-209ENST00000488558 FRAT2O75474 233 aaPredicted RBP28.81■■■□□ 2.2
CUL4A-209ENST00000488558 TRIM27P14373 513 aa28.81■■■□□ 2.2
CUL4A-209ENST00000488558 RBM5P52756 815 aaKnown RBP eCLIP28.81■■■□□ 2.22e-8■■■■■ 30
CUL4A-209ENST00000488558 ATF7IPQ6VMQ6 1270 aa28.81■■■□□ 2.2
CUL4A-209ENST00000488558 CLRN2A0PK11 232 aa28.8■■■□□ 2.2
CUL4A-209ENST00000488558 BCAMP50895 628 aa28.8■■■□□ 2.2
CUL4A-209ENST00000488558 HDLBPQ00341 1268 aaKnown RBP28.8■■■□□ 2.2
CUL4A-209ENST00000488558 COPRSQ9NQ92 184 aa28.8■■■□□ 2.2
CUL4A-209ENST00000488558 IQSEC3Q9UPP2 1182 aaPredicted RBP28.8■■■□□ 2.2
CUL4A-209ENST00000488558 AOX1Q06278 1338 aa28.79■■■□□ 2.2
CUL4A-209ENST00000488558 IL15P40933 162 aaPredicted RBP28.79■■■□□ 2.2
CUL4A-209ENST00000488558 CHAF1AQ13111 956 aaPredicted RBP28.79■■■□□ 2.2
CUL4A-209ENST00000488558 TNFAIP1Q13829 316 aa28.79■■■□□ 2.2
CUL4A-209ENST00000488558 SPDYE2Q495Y8 402 aa28.79■■■□□ 2.2
CUL4A-209ENST00000488558 CSRNP1Q96S65 589 aa28.79■■■□□ 2.2
CUL4A-209ENST00000488558 VEZTQ9HBM0 779 aa28.79■■■□□ 2.2
CUL4A-209ENST00000488558 SUGT1Q9Y2Z0 365 aa28.79■■■□□ 2.2
CUL4A-209ENST00000488558 LAMB1P07942 1786 aa28.78■■■□□ 2.2
CUL4A-209ENST00000488558 CAPN15O75808 1086 aa28.78■■■□□ 2.2
CUL4A-209ENST00000488558 CRKP46108 304 aa28.78■■■□□ 2.2
CUL4A-209ENST00000488558 MTX1Q13505 466 aa28.78■■■□□ 2.2
CUL4A-209ENST00000488558 MAP3K11Q16584 847 aa28.78■■■□□ 2.2
CUL4A-209ENST00000488558 LDLRAD1Q5T700 205 aa28.78■■■□□ 2.2
CUL4A-209ENST00000488558 SIL1Q9H173 461 aa28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms