RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 RIPOR2Q9Y4F9 1068 aa28.44■■■□□ 2.14
PTPN4-211ENST00000488279 TRMT2AQ8IZ69 625 aaKnown RBP28.43■■■□□ 2.14
PTPN4-211ENST00000488279 MROH5Q6ZUA9 1318 aa28.43■■■□□ 2.14
PTPN4-211ENST00000488279 TTLL12Q14166 644 aaPredicted RBP28.42■■■□□ 2.14
PTPN4-211ENST00000488279 USP44Q9H0E7 712 aa28.42■■■□□ 2.14
PTPN4-211ENST00000488279 SMC4Q9NTJ3 1288 aa28.42■■■□□ 2.14
PTPN4-211ENST00000488279 F8W031 263 aaPredicted RBP28.41■■■□□ 2.14
PTPN4-211ENST00000488279 UBE2Q2LH0YL09 131 aa28.41■■■□□ 2.14
PTPN4-211ENST00000488279 HIBADHP31937 336 aaKnown RBP28.41■■■□□ 2.14
PTPN4-211ENST00000488279 MOB2Q70IA6 237 aa28.41■■■□□ 2.14
PTPN4-211ENST00000488279 ANKRD44Q8N8A2 993 aa28.41■■■□□ 2.14
PTPN4-211ENST00000488279 MTMR14Q8NCE2 650 aa28.41■■■□□ 2.14
PTPN4-211ENST00000488279 JAG2Q9Y219 1238 aa28.41■■■□□ 2.14
PTPN4-211ENST00000488279 RASAL3Q86YV0 1011 aa28.4■■■□□ 2.14
PTPN4-211ENST00000488279 REM2Q8IYK8 340 aaPredicted RBP28.4■■■□□ 2.14
PTPN4-211ENST00000488279 ZNF646O15015 1829 aaPredicted RBP28.4■■■□□ 2.14
PTPN4-211ENST00000488279 CT47B1P0C2W7 299 aaPredicted RBP28.39■■■□□ 2.14
PTPN4-211ENST00000488279 GYG1P46976 350 aa28.39■■■□□ 2.14
PTPN4-211ENST00000488279 TDRD7Q8NHU6 1098 aaKnown RBP28.39■■■□□ 2.14
PTPN4-211ENST00000488279 ABHD8Q96I13 439 aa28.39■■■□□ 2.14
PTPN4-211ENST00000488279 FAM84BQ96KN1 310 aaPredicted RBP28.39■■■□□ 2.14
PTPN4-211ENST00000488279 CSRNP1Q96S65 589 aa28.39■■■□□ 2.14
PTPN4-211ENST00000488279 SAGE1Q9NXZ1 904 aa28.39■■■□□ 2.14
PTPN4-211ENST00000488279 MYO1BO43795 1136 aa28.38■■■□□ 2.13
PTPN4-211ENST00000488279 FAM205AQ6ZU69 1335 aa28.38■■■□□ 2.13
PTPN4-211ENST00000488279 CFAP100Q494V2 611 aa28.37■■■□□ 2.13
PTPN4-211ENST00000488279 LRRC24Q50LG9 513 aa28.37■■■□□ 2.13
PTPN4-211ENST00000488279 METTL24Q5JXM2 366 aa28.37■■■□□ 2.13
PTPN4-211ENST00000488279 DEFB129Q9H1M3 183 aa28.37■■■□□ 2.13
PTPN4-211ENST00000488279 RNF186Q9NXI6 227 aa28.37■■■□□ 2.13
PTPN4-211ENST00000488279 PAPPA2Q9BXP8 1791 aa28.37■■■□□ 2.13
PTPN4-211ENST00000488279 VPS37DQ86XT2 251 aa28.36■■■□□ 2.13
PTPN4-211ENST00000488279 SPDYE2BA6NHP3 402 aa28.35■■■□□ 2.13
PTPN4-211ENST00000488279 TRPA1O75762 1119 aa28.35■■■□□ 2.13
PTPN4-211ENST00000488279 SPDYE6P0CI01 402 aa28.35■■■□□ 2.13
PTPN4-211ENST00000488279 RBM5P52756 815 aaKnown RBP eCLIP28.35■■■□□ 2.13
PTPN4-211ENST00000488279 MFSD14BQ5SR56 506 aa28.35■■■□□ 2.13
PTPN4-211ENST00000488279 ARMC9Q7Z3E5 817 aa28.35■■■□□ 2.13
PTPN4-211ENST00000488279 PRMT6Q96LA8 375 aaPredicted RBP28.35■■■□□ 2.13
PTPN4-211ENST00000488279 PDE8BO95263 885 aa28.34■■■□□ 2.13
PTPN4-211ENST00000488279 PCDHAC2Q9Y5I4 1007 aa28.34■■■□□ 2.13
PTPN4-211ENST00000488279 A0A1B0GUL6 1792 aa28.33■■■□□ 2.13
PTPN4-211ENST00000488279 CAVIN4Q5BKX8 364 aa28.33■■■□□ 2.13
PTPN4-211ENST00000488279 FBXO33Q7Z6M2 555 aa28.33■■■□□ 2.13
PTPN4-211ENST00000488279 KLHDC4Q8TBB5 520 aa28.33■■■□□ 2.13
PTPN4-211ENST00000488279 NOB1Q9ULX3 412 aaKnown RBP28.33■■■□□ 2.13
PTPN4-211ENST00000488279 PRKG1Q13976 671 aa28.32■■■□□ 2.12
PTPN4-211ENST00000488279 PPP2R3BQ9Y5P8 575 aa28.32■■■□□ 2.12
PTPN4-211ENST00000488279 CLRN2A0PK11 232 aa28.31■■■□□ 2.12
PTPN4-211ENST00000488279 PTPN12Q05209 780 aaKnown RBP28.31■■■□□ 2.12
PTPN4-211ENST00000488279 VGLL2Q8N8G2 317 aa28.31■■■□□ 2.12
PTPN4-211ENST00000488279 SERPINA10Q9UK55 444 aa28.31■■■□□ 2.12
PTPN4-211ENST00000488279 TTF2Q9UNY4 1162 aaKnown RBP28.31■■■□□ 2.12
PTPN4-211ENST00000488279 COL1A1P02452 1464 aaPredicted RBP28.3■■■□□ 2.12
PTPN4-211ENST00000488279 FRAT2O75474 233 aaPredicted RBP28.3■■■□□ 2.12
PTPN4-211ENST00000488279 API5Q9BZZ5 524 aaKnown RBP28.3■■■□□ 2.12
PTPN4-211ENST00000488279 VEZTQ9HBM0 779 aa28.3■■■□□ 2.12
PTPN4-211ENST00000488279 ANGEL1Q9UNK9 670 aaKnown RBP28.3■■■□□ 2.12
PTPN4-211ENST00000488279 SUPT20HL1Q3ZLR7 823 aa28.29■■■□□ 2.12
PTPN4-211ENST00000488279 MCOLN1Q9GZU1 580 aa28.29■■■□□ 2.12
PTPN4-211ENST00000488279 PPP1R12BO60237 982 aaPredicted RBP28.28■■■□□ 2.12
PTPN4-211ENST00000488279 UBTFL1P0CB47 393 aaPredicted RBP28.28■■■□□ 2.12
PTPN4-211ENST00000488279 LDLRAD1Q5T700 205 aa28.28■■■□□ 2.12
PTPN4-211ENST00000488279 IQSEC3Q9UPP2 1182 aaPredicted RBP28.28■■■□□ 2.12
PTPN4-211ENST00000488279 RFX5P48382 616 aaPredicted RBP28.27■■■□□ 2.12
PTPN4-211ENST00000488279 DGKZQ13574 1117 aa28.27■■■□□ 2.12
PTPN4-211ENST00000488279 PUM3Q15397 648 aaKnown RBP28.27■■■□□ 2.12
PTPN4-211ENST00000488279 HDAC5Q9UQL6 1122 aa28.27■■■□□ 2.12
PTPN4-211ENST00000488279 CCDC85CA6NKD9 419 aa28.26■■■□□ 2.11
PTPN4-211ENST00000488279 EYA2O00167 538 aa28.26■■■□□ 2.11
PTPN4-211ENST00000488279 IFIT1P09914 478 aaKnown RBP28.26■■■□□ 2.11
PTPN4-211ENST00000488279 MKRN3Q13064 507 aaKnown RBP28.26■■■□□ 2.11
PTPN4-211ENST00000488279 CHAF1AQ13111 956 aaPredicted RBP28.26■■■□□ 2.11
PTPN4-211ENST00000488279 TBC1D22AQ8WUA7 517 aa28.26■■■□□ 2.11
PTPN4-211ENST00000488279 CASP8AP2Q9UKL3 1982 aa28.26■■■□□ 2.11
PTPN4-211ENST00000488279 AOX1Q06278 1338 aa28.25■■■□□ 2.11
PTPN4-211ENST00000488279 TM4SF4P48230 202 aa28.25■■■□□ 2.11
PTPN4-211ENST00000488279 BCAMP50895 628 aa28.25■■■□□ 2.11
PTPN4-211ENST00000488279 RARSP54136 660 aaKnown RBP28.25■■■□□ 2.11
PTPN4-211ENST00000488279 TNFAIP1Q13829 316 aa28.25■■■□□ 2.11
PTPN4-211ENST00000488279 DZIP1LQ8IYY4 767 aaKnown RBP28.25■■■□□ 2.11
PTPN4-211ENST00000488279 FZD1Q9UP38 647 aa28.25■■■□□ 2.11
PTPN4-211ENST00000488279 CRKP46108 304 aa28.24■■■□□ 2.11
PTPN4-211ENST00000488279 RASA3Q14644 834 aa28.24■■■□□ 2.11
PTPN4-211ENST00000488279 MAP3K11Q16584 847 aa28.24■■■□□ 2.11
PTPN4-211ENST00000488279 SLC10A4Q96EP9 437 aa28.24■■■□□ 2.11
PTPN4-211ENST00000488279 ZNF70Q9UC06 446 aaPredicted RBP28.24■■■□□ 2.11
PTPN4-211ENST00000488279 KIF16BQ96L93 1317 aa28.23■■■□□ 2.11
PTPN4-211ENST00000488279 FGFR2P21802 821 aa28.23■■■□□ 2.11
PTPN4-211ENST00000488279 SREBF2Q12772 1141 aa28.23■■■□□ 2.11
PTPN4-211ENST00000488279 SPDYE2Q495Y8 402 aa28.23■■■□□ 2.11
PTPN4-211ENST00000488279 TDRD3Q9H7E2 651 aaKnown RBP28.23■■■□□ 2.11
PTPN4-211ENST00000488279 NBPF12Q5TAG4 269 aaPredicted RBP28.22■■■□□ 2.11
PTPN4-211ENST00000488279 LPIN2Q92539 896 aa28.22■■■□□ 2.11
PTPN4-211ENST00000488279 FBXO3Q9UK99 471 aa28.22■■■□□ 2.11
PTPN4-211ENST00000488279 UNCXA6NJT0 531 aa28.21■■■□□ 2.11
PTPN4-211ENST00000488279 SLC5A1P13866 664 aa28.21■■■□□ 2.11
PTPN4-211ENST00000488279 HDLBPQ00341 1268 aaKnown RBP28.21■■■□□ 2.11
PTPN4-211ENST00000488279 SPRYD7Q5W111 196 aa28.21■■■□□ 2.11
PTPN4-211ENST00000488279 ARHGAP45Q92619 1136 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 172.4 ms