RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 CCDC8Q9H0W5 538 aaPredicted RBP13.6□□□□□ -0.23
UBE4B-210ENST00000488228 DCTPP1Q9H773 170 aa13.6□□□□□ -0.23
UBE4B-210ENST00000488228 RRAGCQ9HB90 399 aa13.6□□□□□ -0.23
UBE4B-210ENST00000488228 POTECB2RU33 542 aa13.59□□□□□ -0.23
UBE4B-210ENST00000488228 RAB11FIP3O75154 756 aa13.59□□□□□ -0.23
UBE4B-210ENST00000488228 FRAT2O75474 233 aaPredicted RBP13.59□□□□□ -0.23
UBE4B-210ENST00000488228 VIL1P09327 827 aaKnown RBP13.59□□□□□ -0.23
UBE4B-210ENST00000488228 RASGRF1Q13972 1273 aa13.59□□□□□ -0.23
UBE4B-210ENST00000488228 GORABQ5T7V8 394 aa13.59□□□□□ -0.23
UBE4B-210ENST00000488228 STRIP1Q5VSL9 837 aa13.59□□□□□ -0.23
UBE4B-210ENST00000488228 TTLL5Q6EMB2 1281 aa13.59□□□□□ -0.23
UBE4B-210ENST00000488228 CERS5Q8N5B7 392 aa13.59□□□□□ -0.23
UBE4B-210ENST00000488228 LRRCC1Q9C099 1032 aa13.59□□□□□ -0.23
UBE4B-210ENST00000488228 GPRC5DQ9NZD1 345 aa13.59□□□□□ -0.23
UBE4B-210ENST00000488228 POLR2AP24928 1970 aaKnown RBP13.59□□□□□ -0.23
UBE4B-210ENST00000488228 IGHDP01880 384 aa13.58□□□□□ -0.24
UBE4B-210ENST00000488228 LMOD1P29536 600 aaPredicted RBP13.58□□□□□ -0.24
UBE4B-210ENST00000488228 EPS15P42566 896 aa13.58□□□□□ -0.24
UBE4B-210ENST00000488228 PI16Q6UXB8 463 aa13.58□□□□□ -0.24
UBE4B-210ENST00000488228 MICALL2Q8IY33 904 aa13.58□□□□□ -0.24
UBE4B-210ENST00000488228 HACL1Q9UJ83 578 aa13.58□□□□□ -0.24
UBE4B-210ENST00000488228 AK9Q5TCS8 1911 aa13.58□□□□□ -0.24
UBE4B-210ENST00000488228 FAM205AQ6ZU69 1335 aa13.58□□□□□ -0.24
UBE4B-210ENST00000488228 NEFLP07196 543 aa13.57□□□□□ -0.24
UBE4B-210ENST00000488228 RPS12P25398 132 aaKnown RBP13.57□□□□□ -0.24
UBE4B-210ENST00000488228 SCARF1Q14162 830 aa13.57□□□□□ -0.24
UBE4B-210ENST00000488228 MFSD14BQ5SR56 506 aa13.57□□□□□ -0.24
UBE4B-210ENST00000488228 TTC39AQ5SRH9 613 aa13.57□□□□□ -0.24
UBE4B-210ENST00000488228 KIAA0825Q8IV33 1275 aa13.57□□□□□ -0.24
UBE4B-210ENST00000488228 CLASRPQ8N2M8 674 aaKnown RBP13.57□□□□□ -0.24
UBE4B-210ENST00000488228 GMLQ99445 158 aa13.57□□□□□ -0.24
UBE4B-210ENST00000488228 GNL3LQ9NVN8 582 aaKnown RBP13.57□□□□□ -0.24
UBE4B-210ENST00000488228 MYO3BQ8WXR4 1341 aa13.57□□□□□ -0.24
UBE4B-210ENST00000488228 IQCA1LA6NCM1 817 aa13.56□□□□□ -0.24
UBE4B-210ENST00000488228 F8W031 263 aaPredicted RBP13.56□□□□□ -0.24
UBE4B-210ENST00000488228 KIF3CO14782 793 aa13.56□□□□□ -0.24
UBE4B-210ENST00000488228 IFIT2P09913 472 aaKnown RBP13.56□□□□□ -0.24
UBE4B-210ENST00000488228 VEGFAP15692 232 aaPredicted RBP13.56□□□□□ -0.24
UBE4B-210ENST00000488228 ARID4AP29374 1257 aaPredicted RBP13.56□□□□□ -0.24
UBE4B-210ENST00000488228 EPHX2P34913 555 aa13.56□□□□□ -0.24
UBE4B-210ENST00000488228 MCAMP43121 646 aa13.56□□□□□ -0.24
UBE4B-210ENST00000488228 GRIK5Q16478 980 aa13.56□□□□□ -0.24
UBE4B-210ENST00000488228 AGBL3Q8NEM8 1001 aa13.56□□□□□ -0.24
UBE4B-210ENST00000488228 TRPM4Q8TD43 1214 aa13.56□□□□□ -0.24
UBE4B-210ENST00000488228 RWDD1Q9H446 243 aaPredicted RBP13.56□□□□□ -0.24
UBE4B-210ENST00000488228 TAF1DQ9H5J8 278 aaPredicted RBP13.56□□□□□ -0.24
UBE4B-210ENST00000488228 CDK5RAP2Q96SN8 1893 aa13.56□□□□□ -0.24
UBE4B-210ENST00000488228 SEMA3EO15041 775 aa13.55□□□□□ -0.24
UBE4B-210ENST00000488228 EGFRP00533 1210 aa13.55□□□□□ -0.24
UBE4B-210ENST00000488228 POTEIP0CG38 1075 aa13.55□□□□□ -0.24
UBE4B-210ENST00000488228 POTEJP0CG39 1038 aa13.55□□□□□ -0.24
UBE4B-210ENST00000488228 EAPPQ56P03 285 aaPredicted RBP13.55□□□□□ -0.24
UBE4B-210ENST00000488228 OTUD7AQ8TE49 926 aaPredicted RBP13.55□□□□□ -0.24
UBE4B-210ENST00000488228 DPF2Q92785 391 aa13.55□□□□□ -0.24
UBE4B-210ENST00000488228 SNRKQ9NRH2 765 aa13.55□□□□□ -0.24
UBE4B-210ENST00000488228 HMG20BQ9P0W2 317 aa13.55□□□□□ -0.24
UBE4B-210ENST00000488228 CNOT7Q9UIV1 285 aaKnown RBP13.55□□□□□ -0.24
UBE4B-210ENST00000488228 USP17L8P0C7I0 530 aa13.54□□□□□ -0.24
UBE4B-210ENST00000488228 TBC1D10BQ4KMP7 808 aaPredicted RBP13.54□□□□□ -0.24
UBE4B-210ENST00000488228 CCDC158Q5M9N0 1113 aa13.54□□□□□ -0.24
UBE4B-210ENST00000488228 TSHZ3Q63HK5 1081 aa13.54□□□□□ -0.24
UBE4B-210ENST00000488228 B4GALNT3Q6L9W6 998 aa13.54□□□□□ -0.24
UBE4B-210ENST00000488228 SAMD7Q7Z3H4 446 aa13.54□□□□□ -0.24
UBE4B-210ENST00000488228 SMC5Q8IY18 1101 aa13.54□□□□□ -0.24
UBE4B-210ENST00000488228 SPATA5Q8NB90 893 aa13.54□□□□□ -0.24
UBE4B-210ENST00000488228 GCC1Q96CN9 775 aa13.54□□□□□ -0.24
UBE4B-210ENST00000488228 DENND2AQ9ULE3 1009 aa13.54□□□□□ -0.24
UBE4B-210ENST00000488228 NDUFB9Q9Y6M9 179 aa13.54□□□□□ -0.24
UBE4B-210ENST00000488228 PDS5AQ29RF7 1337 aaKnown RBP13.54□□□□□ -0.24
UBE4B-210ENST00000488228 TRPM7Q96QT4 1865 aa13.53□□□□□ -0.24
UBE4B-210ENST00000488228 UQCRFS1P1P0C7P4 283 aa13.53□□□□□ -0.24
UBE4B-210ENST00000488228 ZNF280AP59817 542 aaPredicted RBP13.53□□□□□ -0.24
UBE4B-210ENST00000488228 FKBP1AP62942 108 aaKnown RBP13.53□□□□□ -0.24
UBE4B-210ENST00000488228 KIF4BQ2VIQ3 1234 aa13.53□□□□□ -0.24
UBE4B-210ENST00000488228 ANKRD45Q5TZF3 282 aa13.53□□□□□ -0.24
UBE4B-210ENST00000488228 TBC1D22AQ8WUA7 517 aa13.53□□□□□ -0.24
UBE4B-210ENST00000488228 ADARB2Q9NS39 739 aaKnown RBP13.53□□□□□ -0.24
UBE4B-210ENST00000488228 H7C1D1 291 aa13.52□□□□□ -0.25
UBE4B-210ENST00000488228 PRDX5P30044 214 aa13.52□□□□□ -0.25
UBE4B-210ENST00000488228 RBM26Q5T8P6 1007 aaKnown RBP13.52□□□□□ -0.25
UBE4B-210ENST00000488228 C16orf71Q8IYS4 520 aaPredicted RBP13.52□□□□□ -0.25
UBE4B-210ENST00000488228 WDR66Q8TBY9 1149 aa13.52□□□□□ -0.25
UBE4B-210ENST00000488228 LNPKQ9C0E8 428 aa13.52□□□□□ -0.25
UBE4B-210ENST00000488228 TTF2Q9UNY4 1162 aaKnown RBP13.52□□□□□ -0.25
UBE4B-210ENST00000488228 PCDHAC2Q9Y5I4 1007 aa13.52□□□□□ -0.25
UBE4B-210ENST00000488228 ASTN2O75129 1339 aaPredicted RBP13.52□□□□□ -0.25
UBE4B-210ENST00000488228 SALL1Q9NSC2 1324 aa13.52□□□□□ -0.25
UBE4B-210ENST00000488228 FOCADQ5VW36 1801 aa13.52□□□□□ -0.25
UBE4B-210ENST00000488228 AOX1Q06278 1338 aa13.51□□□□□ -0.25
UBE4B-210ENST00000488228 ZAP70P43403 619 aa13.51□□□□□ -0.25
UBE4B-210ENST00000488228 HIRAP54198 1017 aaPredicted RBP13.51□□□□□ -0.25
UBE4B-210ENST00000488228 TBC1D9Q6ZT07 1266 aa13.51□□□□□ -0.25
UBE4B-210ENST00000488228 ZNF512BQ96KM6 892 aaPredicted RBP13.51□□□□□ -0.25
UBE4B-210ENST00000488228 MYOZ2Q9NPC6 264 aa13.51□□□□□ -0.25
UBE4B-210ENST00000488228 ABCF2Q9UG63 623 aa13.51□□□□□ -0.25
UBE4B-210ENST00000488228 SALL3Q9BXA9 1300 aa13.5□□□□□ -0.25
UBE4B-210ENST00000488228 ZBTB22O15209 634 aa13.5□□□□□ -0.25
UBE4B-210ENST00000488228 DIXDC1Q155Q3 683 aa13.5□□□□□ -0.25
UBE4B-210ENST00000488228 USP50Q70EL3 339 aaPredicted RBP13.5□□□□□ -0.25
UBE4B-210ENST00000488228 OGFOD1Q8N543 542 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms