RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 RPS12P25398 132 aaKnown RBP19.31■□□□□ 0.68
C9orf3-219ENST00000488186 GMPSP49915 693 aaPredicted RBP19.31■□□□□ 0.68
C9orf3-219ENST00000488186 FSTL1Q12841 308 aa19.31■□□□□ 0.68
C9orf3-219ENST00000488186 TTC39AQ5SRH9 613 aa19.31■□□□□ 0.68
C9orf3-219ENST00000488186 CCDC102BQ68D86 513 aa19.31■□□□□ 0.68
C9orf3-219ENST00000488186 RSBN1LQ6PCB5 846 aaPredicted RBP19.31■□□□□ 0.68
C9orf3-219ENST00000488186 PNMA8AQ86V59 439 aaPredicted RBP19.31■□□□□ 0.68
C9orf3-219ENST00000488186 C16orf71Q8IYS4 520 aaPredicted RBP19.31■□□□□ 0.68
C9orf3-219ENST00000488186 HACL1Q9UJ83 578 aa19.31■□□□□ 0.68
C9orf3-219ENST00000488186 JAG2Q9Y219 1238 aa19.31■□□□□ 0.68
C9orf3-219ENST00000488186 ZBTB12Q9Y330 459 aaPredicted RBP19.31■□□□□ 0.68
C9orf3-219ENST00000488186 H7C1D1 291 aa19.3■□□□□ 0.68
C9orf3-219ENST00000488186 PHKA1P46020 1223 aa19.3■□□□□ 0.68
C9orf3-219ENST00000488186 MMP14P50281 582 aa19.3■□□□□ 0.68
C9orf3-219ENST00000488186 AGBL3Q8NEM8 1001 aa19.3■□□□□ 0.68
C9orf3-219ENST00000488186 EAF2Q96CJ1 260 aaPredicted RBP19.3■□□□□ 0.68
C9orf3-219ENST00000488186 TAF1DQ9H5J8 278 aaPredicted RBP19.3■□□□□ 0.68
C9orf3-219ENST00000488186 DENND2AQ9ULE3 1009 aa19.3■□□□□ 0.68
C9orf3-219ENST00000488186 MYO3BQ8WXR4 1341 aa19.29■□□□□ 0.68
C9orf3-219ENST00000488186 SEMA3EO15041 775 aa19.29■□□□□ 0.68
C9orf3-219ENST00000488186 SMARCA5O60264 1052 aaPredicted RBP19.29■□□□□ 0.68
C9orf3-219ENST00000488186 UQCRFS1P1P0C7P4 283 aa19.29■□□□□ 0.68
C9orf3-219ENST00000488186 SCNN1DP51172 638 aa19.29■□□□□ 0.68
C9orf3-219ENST00000488186 DACT2Q5SW24 774 aa19.29■□□□□ 0.68
C9orf3-219ENST00000488186 DBNDD2Q9BQY9 259 aa19.29■□□□□ 0.68
C9orf3-219ENST00000488186 GPRC5DQ9NZD1 345 aa19.29■□□□□ 0.68
C9orf3-219ENST00000488186 ZBTB22O15209 634 aa19.28■□□□□ 0.68
C9orf3-219ENST00000488186 ANKRD45Q5TZF3 282 aa19.28■□□□□ 0.68
C9orf3-219ENST00000488186 TBC1D22AQ8WUA7 517 aa19.28■□□□□ 0.68
C9orf3-219ENST00000488186 CNOT7Q9UIV1 285 aaKnown RBP19.28■□□□□ 0.68
C9orf3-219ENST00000488186 FAM205AQ6ZU69 1335 aa19.27■□□□□ 0.68
C9orf3-219ENST00000488186 EPHX2P34913 555 aa19.27■□□□□ 0.68
C9orf3-219ENST00000488186 USP50Q70EL3 339 aaPredicted RBP19.27■□□□□ 0.68
C9orf3-219ENST00000488186 OGFOD1Q8N543 542 aa19.27■□□□□ 0.68
C9orf3-219ENST00000488186 WDR66Q8TBY9 1149 aa19.27■□□□□ 0.68
C9orf3-219ENST00000488186 MXD3Q9BW11 206 aa19.27■□□□□ 0.68
C9orf3-219ENST00000488186 DBNLQ9UJU6 430 aaKnown RBP19.27■□□□□ 0.68
C9orf3-219ENST00000488186 HDAC9Q9UKV0 1011 aa19.27■□□□□ 0.68
C9orf3-219ENST00000488186 ADAMTSL1Q8N6G6 1762 aa19.27■□□□□ 0.67
C9orf3-219ENST00000488186 IGHDP01880 384 aa19.26■□□□□ 0.67
C9orf3-219ENST00000488186 USP17L8P0C7I0 530 aa19.26■□□□□ 0.67
C9orf3-219ENST00000488186 EPS15P42566 896 aa19.26■□□□□ 0.67
C9orf3-219ENST00000488186 MFSD14BQ5SR56 506 aa19.26■□□□□ 0.67
C9orf3-219ENST00000488186 MICALL2Q8IY33 904 aa19.26■□□□□ 0.67
C9orf3-219ENST00000488186 SMC1BQ8NDV3 1235 aa19.26■□□□□ 0.67
C9orf3-219ENST00000488186 ZNF646O15015 1829 aaPredicted RBP19.25■□□□□ 0.67
C9orf3-219ENST00000488186 F8W031 263 aaPredicted RBP19.25■□□□□ 0.67
C9orf3-219ENST00000488186 FKBP1AP62942 108 aaKnown RBP19.25■□□□□ 0.67
C9orf3-219ENST00000488186 B4GALNT3Q6L9W6 998 aa19.25■□□□□ 0.67
C9orf3-219ENST00000488186 LDHDQ86WU2 507 aa19.25■□□□□ 0.67
C9orf3-219ENST00000488186 GPATCH3Q96I76 525 aa19.25■□□□□ 0.67
C9orf3-219ENST00000488186 ADARB2Q9NS39 739 aaKnown RBP19.25■□□□□ 0.67
C9orf3-219ENST00000488186 TLR7Q9NYK1 1049 aaKnown RBP19.25■□□□□ 0.67
C9orf3-219ENST00000488186 ARID4AP29374 1257 aaPredicted RBP19.24■□□□□ 0.67
C9orf3-219ENST00000488186 EAPPQ56P03 285 aaPredicted RBP19.24■□□□□ 0.67
C9orf3-219ENST00000488186 RBM26Q5T8P6 1007 aaKnown RBP19.24■□□□□ 0.67
C9orf3-219ENST00000488186 KIAA0825Q8IV33 1275 aa19.24■□□□□ 0.67
C9orf3-219ENST00000488186 ZGPATQ8N5A5 531 aaKnown RBP19.24■□□□□ 0.67
C9orf3-219ENST00000488186 GMLQ99445 158 aa19.24■□□□□ 0.67
C9orf3-219ENST00000488186 CLEC11AQ9Y240 323 aa19.24■□□□□ 0.67
C9orf3-219ENST00000488186 RASGRF1Q13972 1273 aa19.23■□□□□ 0.67
C9orf3-219ENST00000488186 SPATA5Q8NB90 893 aa19.23■□□□□ 0.67
C9orf3-219ENST00000488186 ZC3H15Q8WU90 426 aaKnown RBP19.23■□□□□ 0.67
C9orf3-219ENST00000488186 RBM5P52756 815 aaKnown RBP eCLIP19.22■□□□□ 0.67
C9orf3-219ENST00000488186 SPTY2D1Q68D10 685 aaPredicted RBP19.22■□□□□ 0.67
C9orf3-219ENST00000488186 CHADLQ6NUI6 762 aa19.22■□□□□ 0.67
C9orf3-219ENST00000488186 SNRKQ9NRH2 765 aa19.22■□□□□ 0.67
C9orf3-219ENST00000488186 HMG20BQ9P0W2 317 aa19.22■□□□□ 0.67
C9orf3-219ENST00000488186 ABCF2Q9UG63 623 aa19.22■□□□□ 0.67
C9orf3-219ENST00000488186 PGAP2Q9UHJ9 254 aa19.22■□□□□ 0.67
C9orf3-219ENST00000488186 TTF2Q9UNY4 1162 aaKnown RBP19.22■□□□□ 0.67
C9orf3-219ENST00000488186 ZNF280AP59817 542 aaPredicted RBP19.21■□□□□ 0.67
C9orf3-219ENST00000488186 SMC5Q8IY18 1101 aa19.21■□□□□ 0.67
C9orf3-219ENST00000488186 CERS5Q8N5B7 392 aa19.21■□□□□ 0.67
C9orf3-219ENST00000488186 ZNF512BQ96KM6 892 aaPredicted RBP19.21■□□□□ 0.67
C9orf3-219ENST00000488186 SUGT1Q9Y2Z0 365 aa19.21■□□□□ 0.67
C9orf3-219ENST00000488186 ARAP2Q8WZ64 1704 aa19.2■□□□□ 0.66
C9orf3-219ENST00000488186 LDHBP07195 334 aaKnown RBP19.2■□□□□ 0.66
C9orf3-219ENST00000488186 MCAMP43121 646 aa19.2■□□□□ 0.66
C9orf3-219ENST00000488186 TBC1D10BQ4KMP7 808 aaPredicted RBP19.2■□□□□ 0.66
C9orf3-219ENST00000488186 SAMD7Q7Z3H4 446 aa19.2■□□□□ 0.66
C9orf3-219ENST00000488186 MYOZ2Q9NPC6 264 aa19.2■□□□□ 0.66
C9orf3-219ENST00000488186 PDS5AQ29RF7 1337 aaKnown RBP19.2■□□□□ 0.66
C9orf3-219ENST00000488186 SHTN1A0MZ66 631 aa19.19■□□□□ 0.66
C9orf3-219ENST00000488186 KIF4BQ2VIQ3 1234 aa19.19■□□□□ 0.66
C9orf3-219ENST00000488186 ERICH6Q7L0X2 663 aa19.19■□□□□ 0.66
C9orf3-219ENST00000488186 CCDC136Q96JN2 1154 aa19.19■□□□□ 0.66
C9orf3-219ENST00000488186 ECHDC1Q9NTX5 307 aa19.19■□□□□ 0.66
C9orf3-219ENST00000488186 MAST3O60307 1309 aa19.19■□□□□ 0.66
C9orf3-219ENST00000488186 HSPA6P17066 643 aa19.18■□□□□ 0.66
C9orf3-219ENST00000488186 SCARF1Q14162 830 aa19.18■□□□□ 0.66
C9orf3-219ENST00000488186 DLGAP5Q15398 846 aa19.18■□□□□ 0.66
C9orf3-219ENST00000488186 PI16Q6UXB8 463 aa19.18■□□□□ 0.66
C9orf3-219ENST00000488186 DZIP1Q86YF9 867 aaKnown RBP19.18■□□□□ 0.66
C9orf3-219ENST00000488186 LNPKQ9C0E8 428 aa19.18■□□□□ 0.66
C9orf3-219ENST00000488186 RAI14Q9P0K7 980 aa19.18■□□□□ 0.66
C9orf3-219ENST00000488186 LRP2BPQ9P2M1 347 aa19.18■□□□□ 0.66
C9orf3-219ENST00000488186 SALL1Q9NSC2 1324 aa19.18■□□□□ 0.66
C9orf3-219ENST00000488186 ZAP70P43403 619 aa19.17■□□□□ 0.66
C9orf3-219ENST00000488186 NUCB1Q02818 461 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms