RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 AGBL5Q8NDL9 886 aa5.47□□□□□ -1.53
R3HDM1-219ENST00000488035 COL26A1Q96A83 441 aa5.47□□□□□ -1.53
R3HDM1-219ENST00000488035 BSDC1Q9NW68 430 aaPredicted RBP5.47□□□□□ -1.53
R3HDM1-219ENST00000488035 ZMIZ1Q9ULJ6 1067 aa5.47□□□□□ -1.53
R3HDM1-219ENST00000488035 NUTM2GQ5VZR2 741 aa5.46□□□□□ -1.54
R3HDM1-219ENST00000488035 KRTAP5-3Q6L8H2 238 aa5.46□□□□□ -1.54
R3HDM1-219ENST00000488035 C16orf46Q6P387 395 aa5.46□□□□□ -1.54
R3HDM1-219ENST00000488035 PAOXQ6QHF9 649 aa5.46□□□□□ -1.54
R3HDM1-219ENST00000488035 CEP120Q8N960 986 aa5.46□□□□□ -1.54
R3HDM1-219ENST00000488035 STK32AQ8WU08 396 aa5.46□□□□□ -1.54
R3HDM1-219ENST00000488035 ABI2Q9NYB9 513 aaPredicted RBP5.46□□□□□ -1.54
R3HDM1-219ENST00000488035 ATG7O95352 703 aa5.45□□□□□ -1.54
R3HDM1-219ENST00000488035 F13BP05160 661 aa5.45□□□□□ -1.54
R3HDM1-219ENST00000488035 NLRP12P59046 1061 aa5.45□□□□□ -1.54
R3HDM1-219ENST00000488035 KRTAP19-4Q3LI73 84 aa5.45□□□□□ -1.54
R3HDM1-219ENST00000488035 POP1Q99575 1024 aaKnown RBP5.45□□□□□ -1.54
R3HDM1-219ENST00000488035 FAM95CA0A1B0GW59 222 aa5.44□□□□□ -1.54
R3HDM1-219ENST00000488035 TMEM88BA6NKF7 163 aa5.44□□□□□ -1.54
R3HDM1-219ENST00000488035 CYP26A1O43174 497 aa5.44□□□□□ -1.54
R3HDM1-219ENST00000488035 FKBP5Q13451 457 aaPredicted RBP5.44□□□□□ -1.54
R3HDM1-219ENST00000488035 SGO2Q562F6 1265 aa5.44□□□□□ -1.54
R3HDM1-219ENST00000488035 C12orf50Q8NA57 414 aaPredicted RBP5.44□□□□□ -1.54
R3HDM1-219ENST00000488035 CYP4F12Q9HCS2 524 aa5.44□□□□□ -1.54
R3HDM1-219ENST00000488035 NOVA2Q9UNW9 492 aaKnown RBP5.44□□□□□ -1.54
R3HDM1-219ENST00000488035 PAPLNO95428 1278 aa5.43□□□□□ -1.54
R3HDM1-219ENST00000488035 USP11P51784 963 aa5.43□□□□□ -1.54
R3HDM1-219ENST00000488035 C19orf57Q0VDD7 668 aa5.43□□□□□ -1.54
R3HDM1-219ENST00000488035 TMEM164Q5U3C3 297 aa5.43□□□□□ -1.54
R3HDM1-219ENST00000488035 ADAMTSL4Q6UY14 1074 aa5.43□□□□□ -1.54
R3HDM1-219ENST00000488035 SMG8Q8ND04 991 aaKnown RBP5.43□□□□□ -1.54
R3HDM1-219ENST00000488035 SLC7A3Q8WY07 619 aa5.43□□□□□ -1.54
R3HDM1-219ENST00000488035 YIPF2Q9BWQ6 316 aa5.43□□□□□ -1.54
R3HDM1-219ENST00000488035 SLAIN2Q9P270 581 aa5.43□□□□□ -1.54
R3HDM1-219ENST00000488035 BIN1O00499 593 aa5.42□□□□□ -1.54
R3HDM1-219ENST00000488035 ZAP70P43403 619 aa5.42□□□□□ -1.54
R3HDM1-219ENST00000488035 NFKBIBQ15653 356 aa5.42□□□□□ -1.54
R3HDM1-219ENST00000488035 ZNF124Q15973 351 aa5.42□□□□□ -1.54
R3HDM1-219ENST00000488035 SWI5Q1ZZU3 235 aa5.42□□□□□ -1.54
R3HDM1-219ENST00000488035 PDE12Q6L8Q7 609 aaKnown RBP5.42□□□□□ -1.54
R3HDM1-219ENST00000488035 FLCNQ8NFG4 579 aa5.42□□□□□ -1.54
R3HDM1-219ENST00000488035 SUGCTQ9HAC7 445 aa5.42□□□□□ -1.54
R3HDM1-219ENST00000488035 PDE2AO00408 941 aaPredicted RBP5.41□□□□□ -1.54
R3HDM1-219ENST00000488035 EIF4EBP3O60516 100 aaPredicted RBP5.41□□□□□ -1.54
R3HDM1-219ENST00000488035 FAM69CQ0P6D2 419 aa5.41□□□□□ -1.54
R3HDM1-219ENST00000488035 ELOAQ14241 798 aaKnown RBP5.41□□□□□ -1.54
R3HDM1-219ENST00000488035 SHISA5Q8N114 240 aa5.41□□□□□ -1.54
R3HDM1-219ENST00000488035 GPR152Q8TDT2 470 aa5.41□□□□□ -1.54
R3HDM1-219ENST00000488035 TMPRSS13Q9BYE2 586 aa5.41□□□□□ -1.54
R3HDM1-219ENST00000488035 SAP130Q9H0E3 1048 aa5.41□□□□□ -1.54
R3HDM1-219ENST00000488035 ELP3Q9H9T3 547 aa5.41□□□□□ -1.54
R3HDM1-219ENST00000488035 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.41□□□□□ -1.54
R3HDM1-219ENST00000488035 ACIN1Q9UKV3 1341 aaKnown RBP5.41□□□□□ -1.54
R3HDM1-219ENST00000488035 TIAF1O95411 115 aa5.4□□□□□ -1.54
R3HDM1-219ENST00000488035 CYP2E1P05181 493 aaPredicted RBP5.4□□□□□ -1.54
R3HDM1-219ENST00000488035 RPLP1P05386 114 aaKnown RBP5.4□□□□□ -1.54
R3HDM1-219ENST00000488035 CYP27A1Q02318 531 aa5.4□□□□□ -1.54
R3HDM1-219ENST00000488035 PKN1Q16512 942 aa5.4□□□□□ -1.54
R3HDM1-219ENST00000488035 ZNF648Q5T619 568 aaPredicted RBP5.4□□□□□ -1.54
R3HDM1-219ENST00000488035 DUSP27Q5VZP5 1158 aa5.4□□□□□ -1.54
R3HDM1-219ENST00000488035 ZAR1Q86SH2 424 aa5.4□□□□□ -1.54
R3HDM1-219ENST00000488035 ABTB2Q8N961 1025 aa5.4□□□□□ -1.54
R3HDM1-219ENST00000488035 PRIMPOLQ96LW4 560 aa5.4□□□□□ -1.54
R3HDM1-219ENST00000488035 TBC1D32Q96NH3 1257 aa5.4□□□□□ -1.54
R3HDM1-219ENST00000488035 PAK6Q9NQU5 681 aaPredicted RBP5.4□□□□□ -1.54
R3HDM1-219ENST00000488035 TNFRSF10BO14763 440 aa5.39□□□□□ -1.55
R3HDM1-219ENST00000488035 TRAIPQ9BWF2 469 aa5.39□□□□□ -1.55
R3HDM1-219ENST00000488035 KRTAP9-3Q9BYQ3 159 aa5.39□□□□□ -1.55
R3HDM1-219ENST00000488035 STIM2Q9P246 746 aa5.39□□□□□ -1.55
R3HDM1-219ENST00000488035 SALL4Q9UJQ4 1053 aa5.39□□□□□ -1.55
R3HDM1-219ENST00000488035 SOX13Q9UN79 622 aa5.39□□□□□ -1.55
R3HDM1-219ENST00000488035 USTQ9Y2C2 406 aa5.39□□□□□ -1.55
R3HDM1-219ENST00000488035 CARMIL2Q6F5E8 1435 aa5.39□□□□□ -1.55
R3HDM1-219ENST00000488035 PRMT3O60678 531 aa5.38□□□□□ -1.55
R3HDM1-219ENST00000488035 PDIA4P13667 645 aaKnown RBP5.38□□□□□ -1.55
R3HDM1-219ENST00000488035 CES1P23141 567 aa5.38□□□□□ -1.55
R3HDM1-219ENST00000488035 IKBKEQ14164 716 aa5.38□□□□□ -1.55
R3HDM1-219ENST00000488035 EXOSC6Q5RKV6 272 aaKnown RBP5.38□□□□□ -1.55
R3HDM1-219ENST00000488035 ZNF438Q7Z4V0 828 aa5.38□□□□□ -1.55
R3HDM1-219ENST00000488035 FBLIM1Q8WUP2 373 aa5.38□□□□□ -1.55
R3HDM1-219ENST00000488035 PMEPA1Q969W9 287 aa5.38□□□□□ -1.55
R3HDM1-219ENST00000488035 USP26Q9BXU7 913 aa5.38□□□□□ -1.55
R3HDM1-219ENST00000488035 DZANK1Q9NVP4 752 aa5.38□□□□□ -1.55
R3HDM1-219ENST00000488035 PRKAG2Q9UGJ0 569 aa5.38□□□□□ -1.55
R3HDM1-219ENST00000488035 NFKBIEO00221 500 aa5.37□□□□□ -1.55
R3HDM1-219ENST00000488035 FARP2O94887 1054 aaPredicted RBP5.37□□□□□ -1.55
R3HDM1-219ENST00000488035 OCLNQ16625 522 aa5.37□□□□□ -1.55
R3HDM1-219ENST00000488035 FAM26DQ5JW98 314 aa5.37□□□□□ -1.55
R3HDM1-219ENST00000488035 CILP2Q8IUL8 1156 aa5.37□□□□□ -1.55
R3HDM1-219ENST00000488035 STK11IPQ8N1F8 1099 aa5.37□□□□□ -1.55
R3HDM1-219ENST00000488035 TMEM102Q8N9M5 508 aaPredicted RBP5.37□□□□□ -1.55
R3HDM1-219ENST00000488035 BSNDQ8WZ55 320 aa5.37□□□□□ -1.55
R3HDM1-219ENST00000488035 EZH1Q92800 747 aaPredicted RBP5.37□□□□□ -1.55
R3HDM1-219ENST00000488035 SOX17Q9H6I2 414 aaPredicted RBP5.37□□□□□ -1.55
R3HDM1-219ENST00000488035 TMEM63CQ9P1W3 806 aa5.37□□□□□ -1.55
R3HDM1-219ENST00000488035 KANSL3Q9P2N6 904 aa5.37□□□□□ -1.55
R3HDM1-219ENST00000488035 LOC100289279A0A1B0GTE1 492 aa5.36□□□□□ -1.55
R3HDM1-219ENST00000488035 ZNF865P0CJ78 1059 aaPredicted RBP5.36□□□□□ -1.55
R3HDM1-219ENST00000488035 PCSK2P16519 638 aa5.36□□□□□ -1.55
R3HDM1-219ENST00000488035 ADMP35318 185 aa5.36□□□□□ -1.55
R3HDM1-219ENST00000488035 TRIM26Q12899 539 aaPredicted RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms