RNA–Protein interactions for RNA: ENST00000487251.5

LRRC1-203, Transcript of leucine rich repeat containing 1, humanhuman

TSL 2

Gene LRRC1, Length 2,527 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC1-203ENST00000487251 SYCE3A1L190 88 aa26.84■■□□□ 1.89
LRRC1-203ENST00000487251 MBD3O95983 291 aa26.84■■□□□ 1.89
LRRC1-203ENST00000487251 NASPP49321 788 aaPredicted RBP26.84■■□□□ 1.89
LRRC1-203ENST00000487251 EXOSC10Q01780 885 aaKnown RBP26.84■■□□□ 1.89
LRRC1-203ENST00000487251 EP400Q96L91 3159 aa26.84■■□□□ 1.89
LRRC1-203ENST00000487251 SCRN1Q12765 414 aa26.84■■□□□ 1.89
LRRC1-203ENST00000487251 FAM173BQ6P4H8 233 aa26.84■■□□□ 1.89
LRRC1-203ENST00000487251 ZNF652Q9Y2D9 606 aa26.84■■□□□ 1.89
LRRC1-203ENST00000487251 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.83■■□□□ 1.89
LRRC1-203ENST00000487251 HMGB1P09429 215 aaKnown RBP26.82■■□□□ 1.88
LRRC1-203ENST00000487251 SLC5A1P13866 664 aa26.82■■□□□ 1.88
LRRC1-203ENST00000487251 GPHNQ9NQX3 736 aaPredicted RBP26.82■■□□□ 1.88
LRRC1-203ENST00000487251 IGHMBP2P38935 993 aaKnown RBP26.82■■□□□ 1.88
LRRC1-203ENST00000487251 RASGRF1Q13972 1273 aa26.82■■□□□ 1.88
LRRC1-203ENST00000487251 DDX11Q96FC9 970 aa26.82■■□□□ 1.88
LRRC1-203ENST00000487251 SRP68Q9UHB9 627 aaKnown RBP26.82■■□□□ 1.88
LRRC1-203ENST00000487251 ZNF532Q9HCE3 1301 aa26.82■■□□□ 1.88
LRRC1-203ENST00000487251 WTIPA6NIX2 430 aaPredicted RBP26.81■■□□□ 1.88
LRRC1-203ENST00000487251 BCAMP50895 628 aa26.81■■□□□ 1.88
LRRC1-203ENST00000487251 TBC1D9BQ66K14 1250 aa26.81■■□□□ 1.88
LRRC1-203ENST00000487251 TMEM87AQ8NBN3 555 aa26.81■■□□□ 1.88
LRRC1-203ENST00000487251 BCL2L12Q9HB09 334 aa26.81■■□□□ 1.88
LRRC1-203ENST00000487251 PPFIA3O75145 1194 aa26.8■■□□□ 1.88
LRRC1-203ENST00000487251 UQCRFS1P1P0C7P4 283 aa26.8■■□□□ 1.88
LRRC1-203ENST00000487251 AMIGO3Q86WK7 504 aa26.8■■□□□ 1.88
LRRC1-203ENST00000487251 PDE6AP16499 860 aa26.8■■□□□ 1.88
LRRC1-203ENST00000487251 CCT2P78371 535 aaKnown RBP26.8■■□□□ 1.88
LRRC1-203ENST00000487251 CHRNDQ07001 517 aa26.8■■□□□ 1.88
LRRC1-203ENST00000487251 TTF1Q15361 905 aaPredicted RBP26.8■■□□□ 1.88
LRRC1-203ENST00000487251 ZSCAN30Q86W11 494 aa26.8■■□□□ 1.88
LRRC1-203ENST00000487251 SPATA5Q8NB90 893 aa26.8■■□□□ 1.88
LRRC1-203ENST00000487251 NAP1L2Q9ULW6 460 aaPredicted RBP26.8■■□□□ 1.88
LRRC1-203ENST00000487251 THSD7AQ9UPZ6 1657 aa26.79■■□□□ 1.88
LRRC1-203ENST00000487251 CLEC4GQ6UXB4 293 aa26.79■■□□□ 1.88
LRRC1-203ENST00000487251 ATP6V1DQ9Y5K8 247 aa26.79■■□□□ 1.88
LRRC1-203ENST00000487251 DOCK2Q92608 1830 aa26.79■■□□□ 1.88
LRRC1-203ENST00000487251 IMMTQ16891 758 aaKnown RBP26.79■■□□□ 1.88
LRRC1-203ENST00000487251 RBSNQ9H1K0 784 aa26.79■■□□□ 1.88
LRRC1-203ENST00000487251 NCOA5Q9HCD5 579 aaKnown RBP26.79■■□□□ 1.88
LRRC1-203ENST00000487251 CNTNAP4Q9C0A0 1308 aa26.79■■□□□ 1.88
LRRC1-203ENST00000487251 SCN7AQ01118 1682 aa26.79■■□□□ 1.88
LRRC1-203ENST00000487251 DENND2AQ9ULE3 1009 aa26.78■■□□□ 1.88
LRRC1-203ENST00000487251 RTL9Q8NET4 1388 aa26.78■■□□□ 1.88
LRRC1-203ENST00000487251 CCDC24Q8N4L8 307 aa26.78■■□□□ 1.88
LRRC1-203ENST00000487251 AGXT2Q9BYV1 514 aa26.78■■□□□ 1.88
LRRC1-203ENST00000487251 CTNNA3Q9UI47 895 aa26.78■■□□□ 1.88
LRRC1-203ENST00000487251 A0A1B0GUL6 1792 aa26.78■■□□□ 1.88
LRRC1-203ENST00000487251 TCRBV5S4A2TA0A5A2 114 aa26.77■■□□□ 1.88
LRRC1-203ENST00000487251 PFKFB2O60825 505 aa26.77■■□□□ 1.88
LRRC1-203ENST00000487251 ZSCAN25Q6NSZ9 544 aa26.77■■□□□ 1.88
LRRC1-203ENST00000487251 IQSEC3Q9UPP2 1182 aaPredicted RBP26.77■■□□□ 1.88
LRRC1-203ENST00000487251 NKX2-3Q8TAU0 364 aa26.77■■□□□ 1.88
LRRC1-203ENST00000487251 NHSQ6T4R5 1651 aa26.77■■□□□ 1.88
LRRC1-203ENST00000487251 GNPATO15228 680 aa26.76■■□□□ 1.87
LRRC1-203ENST00000487251 CTDNEP1O95476 244 aa26.76■■□□□ 1.87
LRRC1-203ENST00000487251 PDCP20941 246 aa26.76■■□□□ 1.87
LRRC1-203ENST00000487251 FOSBP53539 338 aa26.76■■□□□ 1.87
LRRC1-203ENST00000487251 NBPF3Q9H094 633 aa26.76■■□□□ 1.87
LRRC1-203ENST00000487251 ATRNO75882 1429 aa26.76■■□□□ 1.87
LRRC1-203ENST00000487251 UBE3CQ15386 1083 aa26.76■■□□□ 1.87
LRRC1-203ENST00000487251 LRSAM1Q6UWE0 723 aa26.75■■□□□ 1.87
LRRC1-203ENST00000487251 OFD1O75665 1012 aa26.75■■□□□ 1.87
LRRC1-203ENST00000487251 MAGEB6Q8N7X4 407 aa26.75■■□□□ 1.87
LRRC1-203ENST00000487251 NSUN7Q8NE18 718 aaKnown RBP26.75■■□□□ 1.87
LRRC1-203ENST00000487251 PDCL3Q9H2J4 239 aa26.75■■□□□ 1.87
LRRC1-203ENST00000487251 ZNF213O14771 459 aa26.74■■□□□ 1.87
LRRC1-203ENST00000487251 APPP05067 770 aa26.74■■□□□ 1.87
LRRC1-203ENST00000487251 CCNL1Q9UK58 526 aaPredicted RBP26.74■■□□□ 1.87
LRRC1-203ENST00000487251 TAF1LQ8IZX4 1826 aa26.73■■□□□ 1.87
LRRC1-203ENST00000487251 GTF2E1P29083 439 aaPredicted RBP26.73■■□□□ 1.87
LRRC1-203ENST00000487251 PDIA3P30101 505 aaKnown RBP26.73■■□□□ 1.87
LRRC1-203ENST00000487251 MB21D2Q8IYB1 491 aaPredicted RBP26.73■■□□□ 1.87
LRRC1-203ENST00000487251 SBF2Q86WG5 1849 aa26.73■■□□□ 1.87
LRRC1-203ENST00000487251 SPATA31A6Q5VVP1 1343 aa26.73■■□□□ 1.87
LRRC1-203ENST00000487251 ANTXR2P58335 489 aa26.73■■□□□ 1.87
LRRC1-203ENST00000487251 RAB11FIP4Q86YS3 637 aa26.73■■□□□ 1.87
LRRC1-203ENST00000487251 SMARCC2Q8TAQ2 1214 aa26.73■■□□□ 1.87
LRRC1-203ENST00000487251 UBE2HP62256 183 aa26.72■■□□□ 1.87
LRRC1-203ENST00000487251 MEX3CQ5U5Q3 659 aaKnown RBP26.72■■□□□ 1.87
LRRC1-203ENST00000487251 CDC5LQ99459 802 aaKnown RBP26.72■■□□□ 1.87
LRRC1-203ENST00000487251 PRC1O43663 620 aa26.72■■□□□ 1.87
LRRC1-203ENST00000487251 RPS6KA4O75676 772 aa26.72■■□□□ 1.87
LRRC1-203ENST00000487251 TBC1D10CQ8IV04 446 aa26.72■■□□□ 1.87
LRRC1-203ENST00000487251 CELF1Q92879 486 aaKnown RBP26.72■■□□□ 1.87
LRRC1-203ENST00000487251 NARFQ9UHQ1 456 aa26.72■■□□□ 1.87
LRRC1-203ENST00000487251 PTPDC1A2A3K4 754 aa26.71■■□□□ 1.87
LRRC1-203ENST00000487251 TTC6Q86TZ1 520 aa26.71■■□□□ 1.87
LRRC1-203ENST00000487251 ANKRD18AQ8IVF6 992 aa26.71■■□□□ 1.87
LRRC1-203ENST00000487251 TFIP11Q9UBB9 837 aaKnown RBP26.71■■□□□ 1.87
LRRC1-203ENST00000487251 AIDAQ96BJ3 306 aa26.71■■□□□ 1.87
LRRC1-203ENST00000487251 STRBPQ96SI9 672 aaKnown RBP26.71■■□□□ 1.87
LRRC1-203ENST00000487251 GYG1P46976 350 aa26.7■■□□□ 1.87
LRRC1-203ENST00000487251 SF3B3Q15393 1217 aaKnown RBP26.7■■□□□ 1.87
LRRC1-203ENST00000487251 FAM184AQ8NB25 1140 aa26.7■■□□□ 1.87
LRRC1-203ENST00000487251 GJD4Q96KN9 370 aaPredicted RBP26.7■■□□□ 1.86
LRRC1-203ENST00000487251 ARMT1Q9H993 441 aa26.7■■□□□ 1.86
LRRC1-203ENST00000487251 MBD4O95243 580 aa26.69■■□□□ 1.86
LRRC1-203ENST00000487251 MSNP26038 577 aaKnown RBP26.69■■□□□ 1.86
LRRC1-203ENST00000487251 RC3H1Q5TC82 1133 aaKnown RBP26.69■■□□□ 1.86
LRRC1-203ENST00000487251 NCOA7Q8NI08 942 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms