RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 TRPM4Q8TD43 1214 aa12.68□□□□□ -0.38
NEK4-204ENST00000487068 DPF2Q92785 391 aa12.68□□□□□ -0.38
NEK4-204ENST00000487068 CD209Q9NNX6 404 aa12.68□□□□□ -0.38
NEK4-204ENST00000487068 CEP126Q9P2H0 1117 aa12.68□□□□□ -0.38
NEK4-204ENST00000487068 ABT1Q9ULW3 272 aaKnown RBP12.68□□□□□ -0.38
NEK4-204ENST00000487068 JAG2Q9Y219 1238 aa12.68□□□□□ -0.38
NEK4-204ENST00000487068 COG6Q9Y2V7 657 aa12.68□□□□□ -0.38
NEK4-204ENST00000487068 WDR33Q9C0J8 1336 aaKnown RBP12.67□□□□□ -0.38
NEK4-204ENST00000487068 MYH2Q9UKX2 1941 aa12.67□□□□□ -0.38
NEK4-204ENST00000487068 CIAO1O76071 339 aa12.67□□□□□ -0.38
NEK4-204ENST00000487068 SLC34A2O95436 690 aa12.67□□□□□ -0.38
NEK4-204ENST00000487068 HIBADHP31937 336 aaKnown RBP12.67□□□□□ -0.38
NEK4-204ENST00000487068 IL15P40933 162 aaPredicted RBP12.67□□□□□ -0.38
NEK4-204ENST00000487068 MVPQ14764 893 aaKnown RBP12.67□□□□□ -0.38
NEK4-204ENST00000487068 ATP2B3Q16720 1220 aa12.67□□□□□ -0.38
NEK4-204ENST00000487068 KIF4BQ2VIQ3 1234 aa12.67□□□□□ -0.38
NEK4-204ENST00000487068 STRIP1Q5VSL9 837 aa12.67□□□□□ -0.38
NEK4-204ENST00000487068 SAMD7Q7Z3H4 446 aa12.67□□□□□ -0.38
NEK4-204ENST00000487068 OGFOD1Q8N543 542 aa12.67□□□□□ -0.38
NEK4-204ENST00000487068 ABHD8Q96I13 439 aa12.67□□□□□ -0.38
NEK4-204ENST00000487068 MXD3Q9BW11 206 aa12.67□□□□□ -0.38
NEK4-204ENST00000487068 DDX19BQ9UMR2 479 aa12.67□□□□□ -0.38
NEK4-204ENST00000487068 IQSEC3Q9UPP2 1182 aaPredicted RBP12.67□□□□□ -0.38
NEK4-204ENST00000487068 ZNF609O15014 1411 aa12.67□□□□□ -0.38
NEK4-204ENST00000487068 THSD7BQ9C0I4 1608 aa12.66□□□□□ -0.38
NEK4-204ENST00000487068 PNMA6EA0A0J9YXQ4 647 aa12.66□□□□□ -0.38
NEK4-204ENST00000487068 USP17L8P0C7I0 530 aa12.66□□□□□ -0.38
NEK4-204ENST00000487068 CHAF1AQ13111 956 aaPredicted RBP12.66□□□□□ -0.38
NEK4-204ENST00000487068 MTX1Q13505 466 aa12.66□□□□□ -0.38
NEK4-204ENST00000487068 DACT2Q5SW24 774 aa12.66□□□□□ -0.38
NEK4-204ENST00000487068 C15orf52Q6ZUT6 534 aaKnown RBP12.66□□□□□ -0.38
NEK4-204ENST00000487068 KIAA0825Q8IV33 1275 aa12.66□□□□□ -0.38
NEK4-204ENST00000487068 VGLL2Q8N8G2 317 aa12.66□□□□□ -0.38
NEK4-204ENST00000487068 HDAC9Q9UKV0 1011 aa12.66□□□□□ -0.38
NEK4-204ENST00000487068 MYO5AQ9Y4I1 1855 aaKnown RBP12.65□□□□□ -0.38
NEK4-204ENST00000487068 IRS2Q9Y4H2 1338 aa12.65□□□□□ -0.38
NEK4-204ENST00000487068 F8W031 263 aaPredicted RBP12.65□□□□□ -0.38
NEK4-204ENST00000487068 G3BP1Q13283 466 aaKnown RBP eCLIP12.65□□□□□ -0.38
NEK4-204ENST00000487068 ATG9AQ7Z3C6 839 aa12.65□□□□□ -0.38
NEK4-204ENST00000487068 CHMP4BQ9H444 224 aaKnown RBP12.65□□□□□ -0.38
NEK4-204ENST00000487068 COPRSQ9NQ92 184 aa12.65□□□□□ -0.38
NEK4-204ENST00000487068 SPDYE4A6NLX3 237 aa12.64□□□□□ -0.39
NEK4-204ENST00000487068 ZBTB7BO15156 539 aaPredicted RBP12.64□□□□□ -0.39
NEK4-204ENST00000487068 EGFRP00533 1210 aa12.64□□□□□ -0.39
NEK4-204ENST00000487068 IL1R1P14778 569 aa12.64□□□□□ -0.39
NEK4-204ENST00000487068 PAXIP1Q6ZW49 1069 aaPredicted RBP12.64□□□□□ -0.39
NEK4-204ENST00000487068 LPIN2Q92539 896 aa12.64□□□□□ -0.39
NEK4-204ENST00000487068 DCPSQ96C86 337 aaKnown RBP12.64□□□□□ -0.39
NEK4-204ENST00000487068 BEGAINQ9BUH8 593 aa12.64□□□□□ -0.39
NEK4-204ENST00000487068 ZNF408Q9H9D4 720 aa12.64□□□□□ -0.39
NEK4-204ENST00000487068 MYOZ2Q9NPC6 264 aa12.64□□□□□ -0.39
NEK4-204ENST00000487068 GGA3Q9NZ52 723 aa12.64□□□□□ -0.39
NEK4-204ENST00000487068 MAST2Q6P0Q8 1798 aa12.64□□□□□ -0.39
NEK4-204ENST00000487068 ECE1P42892 770 aa12.63□□□□□ -0.39
NEK4-204ENST00000487068 TFCP2Q12800 502 aa12.63□□□□□ -0.39
NEK4-204ENST00000487068 MFSD14BQ5SR56 506 aa12.63□□□□□ -0.39
NEK4-204ENST00000487068 FAM84BQ96KN1 310 aaPredicted RBP12.63□□□□□ -0.39
NEK4-204ENST00000487068 AKAP2Q9Y2D5 859 aa12.63□□□□□ -0.39
NEK4-204ENST00000487068 SURF6O75683 361 aaKnown RBP12.62□□□□□ -0.39
NEK4-204ENST00000487068 SASH1O94885 1247 aa12.62□□□□□ -0.39
NEK4-204ENST00000487068 FGFR2P21802 821 aa12.62□□□□□ -0.39
NEK4-204ENST00000487068 BCAMP50895 628 aa12.62□□□□□ -0.39
NEK4-204ENST00000487068 RBM5P52756 815 aaKnown RBP eCLIP12.62□□□□□ -0.39
NEK4-204ENST00000487068 HIRAP54198 1017 aaPredicted RBP12.62□□□□□ -0.39
NEK4-204ENST00000487068 ATP8B2P98198 1209 aa12.62□□□□□ -0.39
NEK4-204ENST00000487068 GORABQ5T7V8 394 aa12.62□□□□□ -0.39
NEK4-204ENST00000487068 C20orf194Q5TEA3 1177 aa12.62□□□□□ -0.39
NEK4-204ENST00000487068 ZC3H15Q8WU90 426 aaKnown RBP12.62□□□□□ -0.39
NEK4-204ENST00000487068 CAPNS2Q96L46 248 aa12.62□□□□□ -0.39
NEK4-204ENST00000487068 NEUROD6Q96NK8 337 aa12.62□□□□□ -0.39
NEK4-204ENST00000487068 GLIS2Q9BZE0 524 aaPredicted RBP12.62□□□□□ -0.39
NEK4-204ENST00000487068 GNL3LQ9NVN8 582 aaKnown RBP12.62□□□□□ -0.39
NEK4-204ENST00000487068 AKAP11Q9UKA4 1901 aa12.61□□□□□ -0.39
NEK4-204ENST00000487068 A0A1B0GUL7 405 aa12.61□□□□□ -0.39
NEK4-204ENST00000487068 TRAF5O00463 557 aa12.61□□□□□ -0.39
NEK4-204ENST00000487068 ZNF280AP59817 542 aaPredicted RBP12.61□□□□□ -0.39
NEK4-204ENST00000487068 GRM1Q13255 1194 aa12.61□□□□□ -0.39
NEK4-204ENST00000487068 PDE3AQ14432 1141 aa12.61□□□□□ -0.39
NEK4-204ENST00000487068 ANGEL2Q5VTE6 544 aaKnown RBP12.61□□□□□ -0.39
NEK4-204ENST00000487068 CEP85Q6P2H3 762 aa12.61□□□□□ -0.39
NEK4-204ENST00000487068 CDC37L1Q7L3B6 337 aa12.61□□□□□ -0.39
NEK4-204ENST00000487068 KRT26Q7Z3Y9 468 aa12.61□□□□□ -0.39
NEK4-204ENST00000487068 SULF1Q8IWU6 871 aa12.61□□□□□ -0.39
NEK4-204ENST00000487068 CERS5Q8N5B7 392 aa12.61□□□□□ -0.39
NEK4-204ENST00000487068 TDRD7Q8NHU6 1098 aaKnown RBP12.61□□□□□ -0.39
NEK4-204ENST00000487068 GMLQ99445 158 aa12.61□□□□□ -0.39
NEK4-204ENST00000487068 BCL11AQ9H165 835 aa12.61□□□□□ -0.39
NEK4-204ENST00000487068 ASTN2O75129 1339 aaPredicted RBP12.61□□□□□ -0.39
NEK4-204ENST00000487068 MYH7P12883 1935 aa12.6□□□□□ -0.39
NEK4-204ENST00000487068 CCDC85CA6NKD9 419 aa12.6□□□□□ -0.39
NEK4-204ENST00000487068 HMMRO75330 724 aa12.6□□□□□ -0.39
NEK4-204ENST00000487068 RRP1P56182 461 aaKnown RBP12.6□□□□□ -0.39
NEK4-204ENST00000487068 MLLT1Q03111 559 aaPredicted RBP12.6□□□□□ -0.39
NEK4-204ENST00000487068 SCARF1Q14162 830 aa12.6□□□□□ -0.39
NEK4-204ENST00000487068 POLA2Q14181 598 aa12.6□□□□□ -0.39
NEK4-204ENST00000487068 DLGAP5Q15398 846 aa12.6□□□□□ -0.39
NEK4-204ENST00000487068 CYP4F22Q6NT55 531 aa12.6□□□□□ -0.39
NEK4-204ENST00000487068 FBXO33Q7Z6M2 555 aa12.6□□□□□ -0.39
NEK4-204ENST00000487068 SSH3Q8TE77 659 aa12.6□□□□□ -0.39
NEK4-204ENST00000487068 TBC1D22AQ8WUA7 517 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms