RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 SALL3Q9BXA9 1300 aa15.68■□□□□ 0.1
HDAC6-229ENST00000486665 A0A1B0GUL6 1792 aa15.67■□□□□ 0.1
HDAC6-229ENST00000486665 DUOX1Q9NRD9 1551 aa15.67■□□□□ 0.1
HDAC6-229ENST00000486665 RASSF10A6NK89 507 aa15.67■□□□□ 0.1
HDAC6-229ENST00000486665 RIMBP2O15034 1052 aa15.67■□□□□ 0.1
HDAC6-229ENST00000486665 GYG1P46976 350 aa15.67■□□□□ 0.1
HDAC6-229ENST00000486665 BCAMP50895 628 aa15.67■□□□□ 0.1
HDAC6-229ENST00000486665 GRIPAP1Q4V328 841 aa15.67■□□□□ 0.1
HDAC6-229ENST00000486665 C15orf52Q6ZUT6 534 aaKnown RBP15.67■□□□□ 0.1
HDAC6-229ENST00000486665 LARGE2Q8N3Y3 721 aa15.67■□□□□ 0.1
HDAC6-229ENST00000486665 FAM84BQ96KN1 310 aaPredicted RBP15.67■□□□□ 0.1
HDAC6-229ENST00000486665 WBP1LQ9NX94 342 aa15.67■□□□□ 0.1
HDAC6-229ENST00000486665 THSD7BQ9C0I4 1608 aa15.66■□□□□ 0.1
HDAC6-229ENST00000486665 TRPM7Q96QT4 1865 aa15.66■□□□□ 0.1
HDAC6-229ENST00000486665 EIF6P56537 245 aaKnown RBP15.66■□□□□ 0.1
HDAC6-229ENST00000486665 TSHZ3Q63HK5 1081 aa15.66■□□□□ 0.1
HDAC6-229ENST00000486665 FBXO33Q7Z6M2 555 aa15.66■□□□□ 0.1
HDAC6-229ENST00000486665 PLEKHM2Q8IWE5 1019 aa15.66■□□□□ 0.1
HDAC6-229ENST00000486665 TRAF5O00463 557 aa15.65■□□□□ 0.1
HDAC6-229ENST00000486665 PHKA1P46020 1223 aa15.65■□□□□ 0.1
HDAC6-229ENST00000486665 AOC3Q16853 763 aa15.65■□□□□ 0.1
HDAC6-229ENST00000486665 WASHC4Q2M389 1173 aa15.65■□□□□ 0.1
HDAC6-229ENST00000486665 DEFB115Q30KQ5 88 aa15.65■□□□□ 0.1
HDAC6-229ENST00000486665 GORABQ5T7V8 394 aa15.65■□□□□ 0.1
HDAC6-229ENST00000486665 CCDC102BQ68D86 513 aa15.65■□□□□ 0.1
HDAC6-229ENST00000486665 SUPT20HQ8NEM7 779 aa15.65■□□□□ 0.1
HDAC6-229ENST00000486665 EYA3Q99504 573 aa15.65■□□□□ 0.1
HDAC6-229ENST00000486665 ZC3H12CQ9C0D7 883 aaKnown RBP15.65■□□□□ 0.1
HDAC6-229ENST00000486665 STAP2Q9UGK3 403 aa15.65■□□□□ 0.1
HDAC6-229ENST00000486665 MX1P20591 662 aa15.64■□□□□ 0.09
HDAC6-229ENST00000486665 HIBADHP31937 336 aaKnown RBP15.64■□□□□ 0.09
HDAC6-229ENST00000486665 CTCFP49711 727 aaPredicted RBP15.64■□□□□ 0.09
HDAC6-229ENST00000486665 LBX1P52954 281 aa15.64■□□□□ 0.09
HDAC6-229ENST00000486665 PDE1AP54750 535 aa15.64■□□□□ 0.09
HDAC6-229ENST00000486665 DOK7Q18PE1 504 aa15.64■□□□□ 0.09
HDAC6-229ENST00000486665 PRDM10Q9NQV6 1147 aa15.64■□□□□ 0.09
HDAC6-229ENST00000486665 WDR33Q9C0J8 1336 aaKnown RBP15.64■□□□□ 0.09
HDAC6-229ENST00000486665 MED23Q9ULK4 1368 aa15.63■□□□□ 0.09
HDAC6-229ENST00000486665 PPIP5K2O43314 1243 aa15.63■□□□□ 0.09
HDAC6-229ENST00000486665 HSPA8P11142 646 aaKnown RBP15.63■□□□□ 0.09
HDAC6-229ENST00000486665 RGS3P49796 1198 aa15.63■□□□□ 0.09
HDAC6-229ENST00000486665 CAVIN4Q5BKX8 364 aa15.63■□□□□ 0.09
HDAC6-229ENST00000486665 CST9Q5W186 159 aa15.63■□□□□ 0.09
HDAC6-229ENST00000486665 ECHDC1Q9NTX5 307 aa15.63■□□□□ 0.09
HDAC6-229ENST00000486665 ABT1Q9ULW3 272 aaKnown RBP15.63■□□□□ 0.09
HDAC6-229ENST00000486665 LMOD1P29536 600 aaPredicted RBP15.62■□□□□ 0.09
HDAC6-229ENST00000486665 KIAA2012Q0VF49 1180 aa15.62■□□□□ 0.09
HDAC6-229ENST00000486665 SCARF1Q14162 830 aa15.62■□□□□ 0.09
HDAC6-229ENST00000486665 CCDC158Q5M9N0 1113 aa15.62■□□□□ 0.09
HDAC6-229ENST00000486665 TTC39AQ5SRH9 613 aa15.62■□□□□ 0.09
HDAC6-229ENST00000486665 NIM1KQ8IY84 436 aa15.62■□□□□ 0.09
HDAC6-229ENST00000486665 PI4K2BQ8TCG2 481 aa15.62■□□□□ 0.09
HDAC6-229ENST00000486665 AIDAQ96BJ3 306 aa15.62■□□□□ 0.09
HDAC6-229ENST00000486665 CD209Q9NNX6 404 aa15.62■□□□□ 0.09
HDAC6-229ENST00000486665 IQSEC3Q9UPP2 1182 aaPredicted RBP15.62■□□□□ 0.09
HDAC6-229ENST00000486665 ATP5JP18859 108 aa15.61■□□□□ 0.09
HDAC6-229ENST00000486665 CXCL9Q07325 125 aa15.61■□□□□ 0.09
HDAC6-229ENST00000486665 VPS37DQ86XT2 251 aa15.61■□□□□ 0.09
HDAC6-229ENST00000486665 BOLA2Q9H3K6 86 aa15.61■□□□□ 0.09
HDAC6-229ENST00000486665 OSBPL3Q9H4L5 887 aa15.61■□□□□ 0.09
HDAC6-229ENST00000486665 TTC41PQ6P2S7 1318 aa15.61■□□□□ 0.09
HDAC6-229ENST00000486665 SHTN1A0MZ66 631 aa15.6■□□□□ 0.09
HDAC6-229ENST00000486665 UQCRFS1P1P0C7P4 283 aa15.6■□□□□ 0.09
HDAC6-229ENST00000486665 IL1R1P14778 569 aa15.6■□□□□ 0.09
HDAC6-229ENST00000486665 ARID4AP29374 1257 aaPredicted RBP15.6■□□□□ 0.09
HDAC6-229ENST00000486665 CYP4F22Q6NT55 531 aa15.6■□□□□ 0.09
HDAC6-229ENST00000486665 USP50Q70EL3 339 aaPredicted RBP15.6■□□□□ 0.09
HDAC6-229ENST00000486665 ZNF804AQ7Z570 1209 aa15.6■□□□□ 0.09
HDAC6-229ENST00000486665 TDRD7Q8NHU6 1098 aaKnown RBP15.6■□□□□ 0.09
HDAC6-229ENST00000486665 GPATCH3Q96I76 525 aa15.6■□□□□ 0.09
HDAC6-229ENST00000486665 ZNF512BQ96KM6 892 aaPredicted RBP15.6■□□□□ 0.09
HDAC6-229ENST00000486665 COA1Q9GZY4 146 aa15.6■□□□□ 0.09
HDAC6-229ENST00000486665 VPS33BQ9H267 617 aa15.6■□□□□ 0.09
HDAC6-229ENST00000486665 DBNDD1Q9H9R9 158 aa15.6■□□□□ 0.09
HDAC6-229ENST00000486665 KCNQ5Q9NR82 932 aa15.6■□□□□ 0.09
HDAC6-229ENST00000486665 SNRKQ9NRH2 765 aa15.6■□□□□ 0.09
HDAC6-229ENST00000486665 GPRC5DQ9NZD1 345 aa15.6■□□□□ 0.09
HDAC6-229ENST00000486665 NDUFB9Q9Y6M9 179 aa15.6■□□□□ 0.09
HDAC6-229ENST00000486665 ARAP2Q8WZ64 1704 aa15.6■□□□□ 0.09
HDAC6-229ENST00000486665 MCAMP43121 646 aa15.59■□□□□ 0.09
HDAC6-229ENST00000486665 GMPSP49915 693 aaPredicted RBP15.59■□□□□ 0.09
HDAC6-229ENST00000486665 RASGRF1Q13972 1273 aa15.59■□□□□ 0.09
HDAC6-229ENST00000486665 PI16Q6UXB8 463 aa15.59■□□□□ 0.09
HDAC6-229ENST00000486665 CAPNS2Q96L46 248 aa15.59■□□□□ 0.09
HDAC6-229ENST00000486665 GNL3LQ9NVN8 582 aaKnown RBP15.59■□□□□ 0.09
HDAC6-229ENST00000486665 HMG20BQ9P0W2 317 aa15.59■□□□□ 0.09
HDAC6-229ENST00000486665 YDJCA8MPS7 323 aa15.58■□□□□ 0.08
HDAC6-229ENST00000486665 G3V3G9 751 aa15.58■□□□□ 0.08
HDAC6-229ENST00000486665 ECE2O60344 883 aa15.58■□□□□ 0.08
HDAC6-229ENST00000486665 GLRX3O76003 335 aaKnown RBP15.58■□□□□ 0.08
HDAC6-229ENST00000486665 MAP4K4O95819 1239 aaPredicted RBP15.58■□□□□ 0.08
HDAC6-229ENST00000486665 HIRAP54198 1017 aaPredicted RBP15.58■□□□□ 0.08
HDAC6-229ENST00000486665 GRM1Q13255 1194 aa15.58■□□□□ 0.08
HDAC6-229ENST00000486665 DCAF8Q5TAQ9 597 aa15.58■□□□□ 0.08
HDAC6-229ENST00000486665 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.58■□□□□ 0.08
HDAC6-229ENST00000486665 HAUS7Q99871 368 aa15.58■□□□□ 0.08
HDAC6-229ENST00000486665 ZNRF3Q9ULT6 936 aa15.58■□□□□ 0.08
HDAC6-229ENST00000486665 JAG2Q9Y219 1238 aa15.58■□□□□ 0.08
HDAC6-229ENST00000486665 AOX1Q06278 1338 aa15.58■□□□□ 0.08
HDAC6-229ENST00000486665 ERC2O15083 957 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms