RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 RILPL2Q969X0 211 aa13.75□□□□□ -0.21
SND1-212ENST00000485871 KLRG1Q96E93 195 aa13.75□□□□□ -0.21
SND1-212ENST00000485871 PIM2Q9P1W9 311 aa13.75□□□□□ -0.21
SND1-212ENST00000485871 SEMA3EO15041 775 aa13.74□□□□□ -0.21
SND1-212ENST00000485871 SEC24BO95487 1268 aa13.74□□□□□ -0.21
SND1-212ENST00000485871 CYP2E1P05181 493 aaPredicted RBP13.74□□□□□ -0.21
SND1-212ENST00000485871 CHMLP26374 656 aa13.74□□□□□ -0.21
SND1-212ENST00000485871 HIBADHP31937 336 aaKnown RBP13.74□□□□□ -0.21
SND1-212ENST00000485871 CAVIN4Q5BKX8 364 aa13.74□□□□□ -0.21
SND1-212ENST00000485871 DPP8Q6V1X1 898 aaPredicted RBP13.74□□□□□ -0.21
SND1-212ENST00000485871 KBTBD3Q8NAB2 608 aa13.74□□□□□ -0.21
SND1-212ENST00000485871 TDRD7Q8NHU6 1098 aaKnown RBP13.74□□□□□ -0.21
SND1-212ENST00000485871 DNAJC2Q99543 621 aaKnown RBP13.74□□□□□ -0.21
SND1-212ENST00000485871 SNRKQ9NRH2 765 aa13.74□□□□□ -0.21
SND1-212ENST00000485871 PAG1Q9NWQ8 432 aa13.74□□□□□ -0.21
SND1-212ENST00000485871 GOLIM4O00461 696 aa13.73□□□□□ -0.21
SND1-212ENST00000485871 C21orf2O43822 256 aa13.73□□□□□ -0.21
SND1-212ENST00000485871 IL1R1P14778 569 aa13.73□□□□□ -0.21
SND1-212ENST00000485871 GRIPAP1Q4V328 841 aa13.73□□□□□ -0.21
SND1-212ENST00000485871 CCDC93Q567U6 631 aa13.73□□□□□ -0.21
SND1-212ENST00000485871 TICAM2Q86XR7 235 aa13.73□□□□□ -0.21
SND1-212ENST00000485871 SPATA5Q8NB90 893 aa13.73□□□□□ -0.21
SND1-212ENST00000485871 IL25Q9H293 177 aa13.73□□□□□ -0.21
SND1-212ENST00000485871 CD209Q9NNX6 404 aa13.73□□□□□ -0.21
SND1-212ENST00000485871 COL4A5P29400 1685 aa13.72□□□□□ -0.21
SND1-212ENST00000485871 C6orf229H3BNL8 230 aa13.72□□□□□ -0.21
SND1-212ENST00000485871 HTRA3P83110 453 aa13.72□□□□□ -0.21
SND1-212ENST00000485871 FKBP4Q02790 459 aaKnown RBP eCLIP13.72□□□□□ -0.21
SND1-212ENST00000485871 NMRK2Q9NPI5 230 aa13.72□□□□□ -0.21
SND1-212ENST00000485871 PIH1D3Q9NQM4 214 aaKnown RBP13.72□□□□□ -0.21
SND1-212ENST00000485871 ZNF219Q9P2Y4 722 aaPredicted RBP13.72□□□□□ -0.21
SND1-212ENST00000485871 IQSEC3Q9UPP2 1182 aaPredicted RBP13.72□□□□□ -0.21
SND1-212ENST00000485871 DICER1Q9UPY3 1922 aaKnown RBP13.71□□□□□ -0.21
SND1-212ENST00000485871 CHGBP05060 677 aa13.71□□□□□ -0.21
SND1-212ENST00000485871 DALRD3Q5D0E6 543 aaKnown RBP13.71□□□□□ -0.21
SND1-212ENST00000485871 ARHGAP27Q6ZUM4 889 aa13.71□□□□□ -0.21
SND1-212ENST00000485871 ZNF804AQ7Z570 1209 aa13.71□□□□□ -0.21
SND1-212ENST00000485871 JMYQ8N9B5 988 aa13.71□□□□□ -0.21
SND1-212ENST00000485871 RBM46Q8TBY0 533 aaKnown RBP13.71□□□□□ -0.21
SND1-212ENST00000485871 PSMD1Q99460 953 aa13.71□□□□□ -0.21
SND1-212ENST00000485871 GNL3LQ9NVN8 582 aaKnown RBP13.71□□□□□ -0.21
SND1-212ENST00000485871 DENND2AQ9ULE3 1009 aa13.71□□□□□ -0.21
SND1-212ENST00000485871 SBF1O95248 1867 aa13.71□□□□□ -0.21
SND1-212ENST00000485871 SALL1Q9NSC2 1324 aa13.7□□□□□ -0.22
SND1-212ENST00000485871 TTF1Q15361 905 aaPredicted RBP13.7□□□□□ -0.22
SND1-212ENST00000485871 SOGA3Q5TF21 947 aa13.7□□□□□ -0.22
SND1-212ENST00000485871 RTKN2Q8IZC4 609 aa13.7□□□□□ -0.22
SND1-212ENST00000485871 EYA3Q99504 573 aa13.7□□□□□ -0.22
SND1-212ENST00000485871 ESYT1Q9BSJ8 1104 aa13.7□□□□□ -0.22
SND1-212ENST00000485871 FSD1Q9BTV5 496 aa13.7□□□□□ -0.22
SND1-212ENST00000485871 COA1Q9GZY4 146 aa13.7□□□□□ -0.22
SND1-212ENST00000485871 TMX4Q9H1E5 349 aaPredicted RBP13.7□□□□□ -0.22
SND1-212ENST00000485871 BCS1LQ9Y276 419 aa13.7□□□□□ -0.22
SND1-212ENST00000485871 FAM205AQ6ZU69 1335 aa13.69□□□□□ -0.22
SND1-212ENST00000485871 MYH2Q9UKX2 1941 aa13.69□□□□□ -0.22
SND1-212ENST00000485871 SGSM2O43147 1006 aa13.69□□□□□ -0.22
SND1-212ENST00000485871 KIAA2012Q0VF49 1180 aa13.69□□□□□ -0.22
SND1-212ENST00000485871 FSTL1Q12841 308 aa13.69□□□□□ -0.22
SND1-212ENST00000485871 WASHC4Q2M389 1173 aa13.69□□□□□ -0.22
SND1-212ENST00000485871 VPS37DQ86XT2 251 aa13.69□□□□□ -0.22
SND1-212ENST00000485871 SUPT20HQ8NEM7 779 aa13.69□□□□□ -0.22
SND1-212ENST00000485871 FAM227BQ96M60 508 aa13.69□□□□□ -0.22
SND1-212ENST00000485871 ANP32EQ9BTT0 268 aa13.69□□□□□ -0.22
SND1-212ENST00000485871 ZC3H12CQ9C0D7 883 aaKnown RBP13.69□□□□□ -0.22
SND1-212ENST00000485871 LTBP3Q9NS15 1303 aa13.68□□□□□ -0.22
SND1-212ENST00000485871 A0A0D9SFI3 127 aa13.68□□□□□ -0.22
SND1-212ENST00000485871 TCRBV5S4A2TA0A5A2 114 aa13.68□□□□□ -0.22
SND1-212ENST00000485871 HIP1O00291 1037 aa13.68□□□□□ -0.22
SND1-212ENST00000485871 RIMBP2O15034 1052 aa13.68□□□□□ -0.22
SND1-212ENST00000485871 EIF5BO60841 1220 aaKnown RBP13.68□□□□□ -0.22
SND1-212ENST00000485871 ADD2P35612 726 aa13.68□□□□□ -0.22
SND1-212ENST00000485871 NMIQ13287 307 aaPredicted RBP13.68□□□□□ -0.22
SND1-212ENST00000485871 SLFNL1Q499Z3 407 aa13.68□□□□□ -0.22
SND1-212ENST00000485871 ZMYM1Q5SVZ6 1142 aa13.68□□□□□ -0.22
SND1-212ENST00000485871 RAD50Q92878 1312 aa13.67□□□□□ -0.22
SND1-212ENST00000485871 NFKBIEO00221 500 aa13.67□□□□□ -0.22
SND1-212ENST00000485871 ZNF384Q8TF68 577 aa13.67□□□□□ -0.22
SND1-212ENST00000485871 UPF2Q9HAU5 1272 aaKnown RBP13.67□□□□□ -0.22
SND1-212ENST00000485871 DIAPH3Q9NSV4 1193 aa13.67□□□□□ -0.22
SND1-212ENST00000485871 CDK5RAP2Q96SN8 1893 aa13.67□□□□□ -0.22
SND1-212ENST00000485871 RNF113AO15541 343 aaKnown RBP13.66□□□□□ -0.22
SND1-212ENST00000485871 ZFYP08048 801 aaPredicted RBP13.66□□□□□ -0.22
SND1-212ENST00000485871 PDE6AP16499 860 aa13.66□□□□□ -0.22
SND1-212ENST00000485871 UBE3CQ15386 1083 aa13.66□□□□□ -0.22
SND1-212ENST00000485871 GRIK5Q16478 980 aa13.66□□□□□ -0.22
SND1-212ENST00000485871 AOC3Q16853 763 aa13.66□□□□□ -0.22
SND1-212ENST00000485871 CASC1Q6TDU7 716 aa13.66□□□□□ -0.22
SND1-212ENST00000485871 CWC27Q6UX04 472 aaKnown RBP13.66□□□□□ -0.22
SND1-212ENST00000485871 PODNQ7Z5L7 613 aa13.66□□□□□ -0.22
SND1-212ENST00000485871 WDR66Q8TBY9 1149 aa13.66□□□□□ -0.22
SND1-212ENST00000485871 APPBP2Q92624 585 aa13.66□□□□□ -0.22
SND1-212ENST00000485871 SEC62Q99442 399 aaKnown RBP13.66□□□□□ -0.22
SND1-212ENST00000485871 VPS33BQ9H267 617 aa13.66□□□□□ -0.22
SND1-212ENST00000485871 ADAMTSL1Q8N6G6 1762 aa13.66□□□□□ -0.22
SND1-212ENST00000485871 MAST3O60307 1309 aa13.65□□□□□ -0.22
SND1-212ENST00000485871 WDR90Q96KV7 1748 aa13.65□□□□□ -0.22
SND1-212ENST00000485871 YDJCA8MPS7 323 aa13.65□□□□□ -0.22
SND1-212ENST00000485871 IGSF3O75054 1194 aa13.65□□□□□ -0.22
SND1-212ENST00000485871 IDH1O75874 414 aaKnown RBP13.65□□□□□ -0.22
SND1-212ENST00000485871 CHAF1AQ13111 956 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 958.3 ms