RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 SLC51AQ86UW1 340 aa10.15□□□□□ -0.78
SF3A1-208ENST00000485618 OGFOD1Q8N543 542 aa10.15□□□□□ -0.78
SF3A1-208ENST00000485618 VGLL2Q8N8G2 317 aa10.15□□□□□ -0.78
SF3A1-208ENST00000485618 EXOC6Q8TAG9 804 aa10.15□□□□□ -0.78
SF3A1-208ENST00000485618 TBC1D22AQ8WUA7 517 aa10.15□□□□□ -0.78
SF3A1-208ENST00000485618 GPATCH3Q96I76 525 aa10.15□□□□□ -0.78
SF3A1-208ENST00000485618 LRRCC1Q9C099 1032 aa10.15□□□□□ -0.78
SF3A1-208ENST00000485618 DCTPP1Q9H773 170 aa10.15□□□□□ -0.78
SF3A1-208ENST00000485618 CD209Q9NNX6 404 aa10.15□□□□□ -0.78
SF3A1-208ENST00000485618 WBP1LQ9NX94 342 aa10.15□□□□□ -0.78
SF3A1-208ENST00000485618 EXOC6BQ9Y2D4 811 aa10.15□□□□□ -0.78
SF3A1-208ENST00000485618 LRRC37AA6NMS7 1700 aa10.15□□□□□ -0.78
SF3A1-208ENST00000485618 WDR33Q9C0J8 1336 aaKnown RBP10.14□□□□□ -0.79
SF3A1-208ENST00000485618 A0A1B0GUL7 405 aa10.14□□□□□ -0.79
SF3A1-208ENST00000485618 H7C1D1 291 aa10.14□□□□□ -0.79
SF3A1-208ENST00000485618 RAD17O75943 681 aa10.14□□□□□ -0.79
SF3A1-208ENST00000485618 HSPA8P11142 646 aaKnown RBP10.14□□□□□ -0.79
SF3A1-208ENST00000485618 FGFR2P21802 821 aa10.14□□□□□ -0.79
SF3A1-208ENST00000485618 SCNN1DP51172 638 aa10.14□□□□□ -0.79
SF3A1-208ENST00000485618 MAP2K1Q02750 393 aaPredicted RBP10.14□□□□□ -0.79
SF3A1-208ENST00000485618 CXCL9Q07325 125 aa10.14□□□□□ -0.79
SF3A1-208ENST00000485618 GRM1Q13255 1194 aa10.14□□□□□ -0.79
SF3A1-208ENST00000485618 ERICH6BQ5W0A0 696 aa10.14□□□□□ -0.79
SF3A1-208ENST00000485618 FBXO33Q7Z6M2 555 aa10.14□□□□□ -0.79
SF3A1-208ENST00000485618 SIRT2Q8IXJ6 389 aa10.14□□□□□ -0.79
SF3A1-208ENST00000485618 ZGPATQ8N5A5 531 aaKnown RBP10.14□□□□□ -0.79
SF3A1-208ENST00000485618 AGBL3Q8NEM8 1001 aa10.14□□□□□ -0.79
SF3A1-208ENST00000485618 DPF2Q92785 391 aa10.14□□□□□ -0.79
SF3A1-208ENST00000485618 FBXW7Q969H0 707 aa10.14□□□□□ -0.79
SF3A1-208ENST00000485618 FAM84BQ96KN1 310 aaPredicted RBP10.14□□□□□ -0.79
SF3A1-208ENST00000485618 HDAC9Q9UKV0 1011 aa10.14□□□□□ -0.79
SF3A1-208ENST00000485618 DENND2AQ9ULE3 1009 aa10.14□□□□□ -0.79
SF3A1-208ENST00000485618 APBB1O00213 710 aa10.13□□□□□ -0.79
SF3A1-208ENST00000485618 VIL1P09327 827 aaKnown RBP10.13□□□□□ -0.79
SF3A1-208ENST00000485618 EPS15P42566 896 aa10.13□□□□□ -0.79
SF3A1-208ENST00000485618 GYG1P46976 350 aa10.13□□□□□ -0.79
SF3A1-208ENST00000485618 TIMM10P62072 90 aa10.13□□□□□ -0.79
SF3A1-208ENST00000485618 FKBP1AP62942 108 aaKnown RBP10.13□□□□□ -0.79
SF3A1-208ENST00000485618 TNNI3KQ59H18 835 aa10.13□□□□□ -0.79
SF3A1-208ENST00000485618 SPTY2D1Q68D10 685 aaPredicted RBP10.13□□□□□ -0.79
SF3A1-208ENST00000485618 WDR66Q8TBY9 1149 aa10.13□□□□□ -0.79
SF3A1-208ENST00000485618 RHPN1Q8TCX5 695 aa10.13□□□□□ -0.79
SF3A1-208ENST00000485618 XAGE2Q96GT9 111 aa10.13□□□□□ -0.79
SF3A1-208ENST00000485618 GPR101Q96P66 508 aaPredicted RBP10.13□□□□□ -0.79
SF3A1-208ENST00000485618 PCDHB15Q9Y5E8 787 aa10.13□□□□□ -0.79
SF3A1-208ENST00000485618 FPGT-TNNI3KV9GXZ4 949 aa10.13□□□□□ -0.79
SF3A1-208ENST00000485618 ZBTB22O15209 634 aa10.12□□□□□ -0.79
SF3A1-208ENST00000485618 IGSF3O75054 1194 aa10.12□□□□□ -0.79
SF3A1-208ENST00000485618 ECE1P42892 770 aa10.12□□□□□ -0.79
SF3A1-208ENST00000485618 BCAMP50895 628 aa10.12□□□□□ -0.79
SF3A1-208ENST00000485618 GTF2IP78347 998 aa10.12□□□□□ -0.79
SF3A1-208ENST00000485618 FMR1Q06787 632 aaKnown RBP eCLIP10.12□□□□□ -0.79
SF3A1-208ENST00000485618 TTC39AQ5SRH9 613 aa10.12□□□□□ -0.79
SF3A1-208ENST00000485618 RSBN1LQ6PCB5 846 aaPredicted RBP10.12□□□□□ -0.79
SF3A1-208ENST00000485618 USP50Q70EL3 339 aaPredicted RBP10.12□□□□□ -0.79
SF3A1-208ENST00000485618 AACSQ86V21 672 aa10.12□□□□□ -0.79
SF3A1-208ENST00000485618 TXNRD3Q86VQ6 643 aa10.12□□□□□ -0.79
SF3A1-208ENST00000485618 SLF2Q8IX21 1173 aa10.12□□□□□ -0.79
SF3A1-208ENST00000485618 TDRD7Q8NHU6 1098 aaKnown RBP10.12□□□□□ -0.79
SF3A1-208ENST00000485618 CAPNS2Q96L46 248 aa10.12□□□□□ -0.79
SF3A1-208ENST00000485618 SUGT1Q9Y2Z0 365 aa10.12□□□□□ -0.79
SF3A1-208ENST00000485618 SPEF2Q9C093 1822 aa10.12□□□□□ -0.79
SF3A1-208ENST00000485618 MAST3O60307 1309 aa10.11□□□□□ -0.79
SF3A1-208ENST00000485618 FAM205AQ6ZU69 1335 aa10.11□□□□□ -0.79
SF3A1-208ENST00000485618 SNAP23O00161 211 aa10.11□□□□□ -0.79
SF3A1-208ENST00000485618 TRAF5O00463 557 aa10.11□□□□□ -0.79
SF3A1-208ENST00000485618 PSMD14O00487 310 aa10.11□□□□□ -0.79
SF3A1-208ENST00000485618 USP17L8P0C7I0 530 aa10.11□□□□□ -0.79
SF3A1-208ENST00000485618 IRX6P78412 446 aaPredicted RBP10.11□□□□□ -0.79
SF3A1-208ENST00000485618 CCDC102BQ68D86 513 aa10.11□□□□□ -0.79
SF3A1-208ENST00000485618 ABHD8Q96I13 439 aa10.11□□□□□ -0.79
SF3A1-208ENST00000485618 BEGAINQ9BUH8 593 aa10.11□□□□□ -0.79
SF3A1-208ENST00000485618 YDJCA8MPS7 323 aa10.1□□□□□ -0.79
SF3A1-208ENST00000485618 KLRK1P26718 216 aa10.1□□□□□ -0.79
SF3A1-208ENST00000485618 GMPSP49915 693 aaPredicted RBP10.1□□□□□ -0.79
SF3A1-208ENST00000485618 CHAF1AQ13111 956 aaPredicted RBP10.1□□□□□ -0.79
SF3A1-208ENST00000485618 ANKRD45Q5TZF3 282 aa10.1□□□□□ -0.79
SF3A1-208ENST00000485618 CYP4F22Q6NT55 531 aa10.1□□□□□ -0.79
SF3A1-208ENST00000485618 TMED8Q6PL24 325 aaPredicted RBP10.1□□□□□ -0.79
SF3A1-208ENST00000485618 ZNF512BQ96KM6 892 aaPredicted RBP10.1□□□□□ -0.79
SF3A1-208ENST00000485618 BCL11AQ9H165 835 aa10.1□□□□□ -0.79
SF3A1-208ENST00000485618 IL1RAPL2Q9NP60 686 aa10.1□□□□□ -0.79
SF3A1-208ENST00000485618 ADARB2Q9NS39 739 aaKnown RBP10.1□□□□□ -0.79
SF3A1-208ENST00000485618 GPRC5DQ9NZD1 345 aa10.1□□□□□ -0.79
SF3A1-208ENST00000485618 CNOT7Q9UIV1 285 aaKnown RBP10.1□□□□□ -0.79
SF3A1-208ENST00000485618 TRPM7Q96QT4 1865 aa10.1□□□□□ -0.79
SF3A1-208ENST00000485618 PDS5AQ29RF7 1337 aaKnown RBP10.09□□□□□ -0.79
SF3A1-208ENST00000485618 WTIPA6NIX2 430 aaPredicted RBP10.09□□□□□ -0.79
SF3A1-208ENST00000485618 ERC2O15083 957 aa10.09□□□□□ -0.79
SF3A1-208ENST00000485618 MYO1BO43795 1136 aa10.09□□□□□ -0.79
SF3A1-208ENST00000485618 GSTO1P78417 241 aa10.09□□□□□ -0.79
SF3A1-208ENST00000485618 TTF1Q15361 905 aaPredicted RBP10.09□□□□□ -0.79
SF3A1-208ENST00000485618 MFSD14BQ5SR56 506 aa10.09□□□□□ -0.79
SF3A1-208ENST00000485618 DACT2Q5SW24 774 aa10.09□□□□□ -0.79
SF3A1-208ENST00000485618 SPATA5Q8NB90 893 aa10.09□□□□□ -0.79
SF3A1-208ENST00000485618 CCDC8Q9H0W5 538 aaPredicted RBP10.09□□□□□ -0.79
SF3A1-208ENST00000485618 TLL2Q9Y6L7 1015 aa10.09□□□□□ -0.79
SF3A1-208ENST00000485618 DUOX1Q9NRD9 1551 aa10.09□□□□□ -0.79
SF3A1-208ENST00000485618 IRS2Q9Y4H2 1338 aa10.08□□□□□ -0.8
SF3A1-208ENST00000485618 CELF2O95319 508 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms