RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, humanhuman

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-222ENST00000485567 ADH7P40394 386 aa6.31□□□□□ -1.4
FN1-222ENST00000485567 LIG3P49916 1009 aa6.31□□□□□ -1.4
FN1-222ENST00000485567 LMNB2Q03252 620 aa6.31□□□□□ -1.4
FN1-222ENST00000485567 PPP2R3AQ06190 1150 aa6.31□□□□□ -1.4
FN1-222ENST00000485567 RBL2Q08999 1139 aa6.31□□□□□ -1.4
FN1-222ENST00000485567 TBC1D8BQ0IIM8 1120 aa6.31□□□□□ -1.4
FN1-222ENST00000485567 FAAP100Q0VG06 881 aa6.31□□□□□ -1.4
FN1-222ENST00000485567 GAS6Q14393 721 aa6.31□□□□□ -1.4
FN1-222ENST00000485567 PERM1Q5SV97 790 aa6.31□□□□□ -1.4
FN1-222ENST00000485567 AGMOQ6ZNB7 445 aa6.31□□□□□ -1.4
FN1-222ENST00000485567 ZNF296Q8WUU4 475 aaPredicted RBP6.31□□□□□ -1.4
FN1-222ENST00000485567 TRIM56Q9BRZ2 755 aaKnown RBP6.31□□□□□ -1.4
FN1-222ENST00000485567 NT5C1AQ9BXI3 368 aa6.31□□□□□ -1.4
FN1-222ENST00000485567 MUC3BQ9H195 1237 aa6.31□□□□□ -1.4
FN1-222ENST00000485567 MBIPQ9NS73 344 aa6.31□□□□□ -1.4
FN1-222ENST00000485567 TMEM39AQ9NV64 488 aa6.31□□□□□ -1.4
FN1-222ENST00000485567 SOX13Q9UN79 622 aa6.31□□□□□ -1.4
FN1-222ENST00000485567 SAMM50Q9Y512 469 aa6.31□□□□□ -1.4
FN1-222ENST00000485567 ELOA3CA0A087WX78 387 aaPredicted RBP6.3□□□□□ -1.4
FN1-222ENST00000485567 ELOA3DA6NLF2 546 aaPredicted RBP6.3□□□□□ -1.4
FN1-222ENST00000485567 LCE2BO14633 110 aa6.3□□□□□ -1.4
FN1-222ENST00000485567 GREM1O60565 184 aa6.3□□□□□ -1.4
FN1-222ENST00000485567 FBXO24O75426 580 aa6.3□□□□□ -1.4
FN1-222ENST00000485567 B3GALT4O96024 378 aa6.3□□□□□ -1.4
FN1-222ENST00000485567 CELA3AP09093 270 aa6.3□□□□□ -1.4
FN1-222ENST00000485567 CPB1P15086 417 aa6.3□□□□□ -1.4
FN1-222ENST00000485567 ELOA3BQ3SY89 546 aa6.3□□□□□ -1.4
FN1-222ENST00000485567 TTBK2Q6IQ55 1244 aa6.3□□□□□ -1.4
FN1-222ENST00000485567 ELMSAN1Q6PJG2 1045 aa6.3□□□□□ -1.4
FN1-222ENST00000485567 CCDC84Q86UT8 332 aaPredicted RBP6.3□□□□□ -1.4
FN1-222ENST00000485567 ELOA3Q8NG57 546 aa6.3□□□□□ -1.4
FN1-222ENST00000485567 LPIN3Q9BQK8 851 aa6.3□□□□□ -1.4
FN1-222ENST00000485567 H3BM21 787 aa6.29□□□□□ -1.4
FN1-222ENST00000485567 FGRP09769 529 aa6.29□□□□□ -1.4
FN1-222ENST00000485567 GARTP22102 1010 aa6.29□□□□□ -1.4
FN1-222ENST00000485567 PCDH1Q08174 1060 aa6.29□□□□□ -1.4
FN1-222ENST00000485567 CAMK2GQ13555 558 aaPredicted RBP6.29□□□□□ -1.4
FN1-222ENST00000485567 COL9A2Q14055 689 aaPredicted RBP6.29□□□□□ -1.4
FN1-222ENST00000485567 MAP3K11Q16584 847 aa6.29□□□□□ -1.4
FN1-222ENST00000485567 SOGA3Q5TF21 947 aa6.29□□□□□ -1.4
FN1-222ENST00000485567 FBXL19Q6PCT2 694 aa6.29□□□□□ -1.4
FN1-222ENST00000485567 VN1R5Q7Z5H4 357 aa6.29□□□□□ -1.4
FN1-222ENST00000485567 MCF2L2Q86YR7 1114 aa6.29□□□□□ -1.4
FN1-222ENST00000485567 GPR161Q8N6U8 529 aaKnown RBP6.29□□□□□ -1.4
FN1-222ENST00000485567 EAF1Q96JC9 268 aaPredicted RBP6.29□□□□□ -1.4
FN1-222ENST00000485567 SMG9Q9H0W8 520 aaKnown RBP6.29□□□□□ -1.4
FN1-222ENST00000485567 SUPT16HQ9Y5B9 1047 aaKnown RBP6.29□□□□□ -1.4
FN1-222ENST00000485567 ROBO2Q9HCK4 1378 aa6.29□□□□□ -1.4
FN1-222ENST00000485567 EIF4EBP3O60516 100 aaPredicted RBP6.28□□□□□ -1.4
FN1-222ENST00000485567 PF4P02776 101 aa6.28□□□□□ -1.4
FN1-222ENST00000485567 VSIG8P0DPA2 414 aa6.28□□□□□ -1.4
FN1-222ENST00000485567 NME2P22392 152 aa6.28□□□□□ -1.4
FN1-222ENST00000485567 ALAS2P22557 587 aa6.28□□□□□ -1.4
FN1-222ENST00000485567 CDC27P30260 824 aa6.28□□□□□ -1.4
FN1-222ENST00000485567 GTF2F1P35269 517 aaKnown RBP eCLIP6.28□□□□□ -1.4
FN1-222ENST00000485567 ZNF423Q2M1K9 1284 aa6.28□□□□□ -1.4
FN1-222ENST00000485567 SCARA3Q6AZY7 606 aa6.28□□□□□ -1.4
FN1-222ENST00000485567 FCHSD1Q86WN1 690 aa6.28□□□□□ -1.4
FN1-222ENST00000485567 GOLGA6L1Q8N7Z2 621 aa6.28□□□□□ -1.4
FN1-222ENST00000485567 DDX54Q8TDD1 881 aaKnown RBP6.28□□□□□ -1.4
FN1-222ENST00000485567 DHX38Q92620 1227 aaKnown RBP6.28□□□□□ -1.4
FN1-222ENST00000485567 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.28□□□□□ -1.4
FN1-222ENST00000485567 HIRIP3Q9BW71 556 aaPredicted RBP6.28□□□□□ -1.4
FN1-222ENST00000485567 GPN3Q9UHW5 284 aaPredicted RBP6.28□□□□□ -1.4
FN1-222ENST00000485567 GDF2Q9UK05 429 aaPredicted RBP6.28□□□□□ -1.4
FN1-222ENST00000485567 NAGPAQ9UK23 515 aa6.28□□□□□ -1.4
FN1-222ENST00000485567 CYP8B1Q9UNU6 501 aa6.28□□□□□ -1.4
FN1-222ENST00000485567 FAM177BA6PVY3 158 aa6.27□□□□□ -1.41
FN1-222ENST00000485567 NEURL1BA8MQ27 555 aa6.27□□□□□ -1.41
FN1-222ENST00000485567 PAGE1O75459 146 aa6.27□□□□□ -1.41
FN1-222ENST00000485567 ESRRAP11474 423 aaPredicted RBP6.27□□□□□ -1.41
FN1-222ENST00000485567 TFE3P19532 575 aaPredicted RBP6.27□□□□□ -1.41
FN1-222ENST00000485567 BMP6P22004 513 aa6.27□□□□□ -1.41
FN1-222ENST00000485567 LRRC14Q15048 493 aa6.27□□□□□ -1.41
FN1-222ENST00000485567 PCNX4Q63HM2 1172 aa6.27□□□□□ -1.41
FN1-222ENST00000485567 PSAPL1Q6NUJ1 521 aa6.27□□□□□ -1.41
FN1-222ENST00000485567 TRIM42Q8IWZ5 723 aa6.27□□□□□ -1.41
FN1-222ENST00000485567 EMILIN2Q9BXX0 1053 aa6.27□□□□□ -1.41
FN1-222ENST00000485567 GGA1Q9UJY5 639 aa6.27□□□□□ -1.41
FN1-222ENST00000485567 TRIM33Q9UPN9 1127 aa6.27□□□□□ -1.41
FN1-222ENST00000485567 TLR6Q9Y2C9 796 aa6.27□□□□□ -1.41
FN1-222ENST00000485567 F6X3S4 739 aa6.26□□□□□ -1.41
FN1-222ENST00000485567 RGS9O75916 674 aaPredicted RBP6.26□□□□□ -1.41
FN1-222ENST00000485567 ARNTP27540 789 aa6.26□□□□□ -1.41
FN1-222ENST00000485567 SOX9P48436 509 aa6.26□□□□□ -1.41
FN1-222ENST00000485567 CABP4P57796 275 aa6.26□□□□□ -1.41
FN1-222ENST00000485567 SNAP47Q5SQN1 464 aa6.26□□□□□ -1.41
FN1-222ENST00000485567 ADAMTSL4Q6UY14 1074 aa6.26□□□□□ -1.41
FN1-222ENST00000485567 SLCO4C1Q6ZQN7 724 aa6.26□□□□□ -1.41
FN1-222ENST00000485567 FAM196AQ6ZSG2 479 aa6.26□□□□□ -1.41
FN1-222ENST00000485567 DPH6Q7L8W6 267 aa6.26□□□□□ -1.41
FN1-222ENST00000485567 GOLM1Q8NBJ4 401 aa6.26□□□□□ -1.41
FN1-222ENST00000485567 LRRC3Q9BY71 257 aa6.26□□□□□ -1.41
FN1-222ENST00000485567 SOX17Q9H6I2 414 aaPredicted RBP6.26□□□□□ -1.41
FN1-222ENST00000485567 STRIP2Q9ULQ0 834 aa6.26□□□□□ -1.41
FN1-222ENST00000485567 IGF1RP08069 1367 aa6.26□□□□□ -1.41
FN1-222ENST00000485567 STK10O94804 968 aaKnown RBP6.25□□□□□ -1.41
FN1-222ENST00000485567 ZNF157P51786 506 aaPredicted RBP6.25□□□□□ -1.41
FN1-222ENST00000485567 SRSF11Q05519 484 aaKnown RBP6.25□□□□□ -1.41
FN1-222ENST00000485567 FAM160A1Q05DH4 1040 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms