RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 PCDHAC2Q9Y5I4 1007 aa24.38■■□□□ 1.49
COL27A1-205ENST00000485397 F8W031 263 aaPredicted RBP24.37■■□□□ 1.49
COL27A1-205ENST00000485397 DLGAP5Q15398 846 aa24.37■■□□□ 1.49
COL27A1-205ENST00000485397 ZNF804AQ7Z570 1209 aa24.37■■□□□ 1.49
COL27A1-205ENST00000485397 PTPN12Q05209 780 aaKnown RBP24.36■■□□□ 1.49
COL27A1-205ENST00000485397 MKRN3Q13064 507 aaKnown RBP24.36■■□□□ 1.49
COL27A1-205ENST00000485397 SUCLG2Q96I99 432 aa24.36■■□□□ 1.49
COL27A1-205ENST00000485397 A0A1B0GUL6 1792 aa24.35■■□□□ 1.49
COL27A1-205ENST00000485397 MLLT1Q03111 559 aaPredicted RBP24.35■■□□□ 1.49
COL27A1-205ENST00000485397 ARMC9Q7Z3E5 817 aa24.35■■□□□ 1.49
COL27A1-205ENST00000485397 KAZALD1Q96I82 304 aa24.35■■□□□ 1.49
COL27A1-205ENST00000485397 FZD1Q9UP38 647 aa24.35■■□□□ 1.49
COL27A1-205ENST00000485397 ZNF521Q96K83 1311 aa24.35■■□□□ 1.49
COL27A1-205ENST00000485397 CFAP100Q494V2 611 aa24.34■■□□□ 1.49
COL27A1-205ENST00000485397 MTMR14Q8NCE2 650 aa24.34■■□□□ 1.49
COL27A1-205ENST00000485397 PUS3Q9BZE2 481 aaKnown RBP24.34■■□□□ 1.49
COL27A1-205ENST00000485397 DEFB129Q9H1M3 183 aa24.34■■□□□ 1.49
COL27A1-205ENST00000485397 TBC1D8O95759 1140 aa24.33■■□□□ 1.49
COL27A1-205ENST00000485397 ANGEL1Q9UNK9 670 aaKnown RBP24.33■■□□□ 1.49
COL27A1-205ENST00000485397 CLRN2A0PK11 232 aa24.32■■□□□ 1.48
COL27A1-205ENST00000485397 NBPF7P0C2Y1 421 aaPredicted RBP24.32■■□□□ 1.48
COL27A1-205ENST00000485397 FKBP1AP62942 108 aaKnown RBP24.32■■□□□ 1.48
COL27A1-205ENST00000485397 LDLRAD1Q5T700 205 aa24.32■■□□□ 1.48
COL27A1-205ENST00000485397 PRMT6Q96LA8 375 aaPredicted RBP24.32■■□□□ 1.48
COL27A1-205ENST00000485397 AOX1Q06278 1338 aa24.32■■□□□ 1.48
COL27A1-205ENST00000485397 TM4SF4P48230 202 aa24.31■■□□□ 1.48
COL27A1-205ENST00000485397 CTU1Q7Z7A3 348 aaKnown RBP24.31■■□□□ 1.48
COL27A1-205ENST00000485397 MRPL50Q8N5N7 158 aaKnown RBP24.31■■□□□ 1.48
COL27A1-205ENST00000485397 SPDYE2BA6NHP3 402 aa24.3■■□□□ 1.48
COL27A1-205ENST00000485397 SPDYE6P0CI01 402 aa24.3■■□□□ 1.48
COL27A1-205ENST00000485397 GYG1P46976 350 aa24.3■■□□□ 1.48
COL27A1-205ENST00000485397 UBE4AQ14139 1066 aa24.3■■□□□ 1.48
COL27A1-205ENST00000485397 TDRD7Q8NHU6 1098 aaKnown RBP24.29■■□□□ 1.48
COL27A1-205ENST00000485397 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.29■■□□□ 1.48
COL27A1-205ENST00000485397 COL1A1P02452 1464 aaPredicted RBP24.29■■□□□ 1.48
COL27A1-205ENST00000485397 UTYO14607 1347 aa24.29■■□□□ 1.48
COL27A1-205ENST00000485397 FAM205AQ6ZU69 1335 aa24.29■■□□□ 1.48
COL27A1-205ENST00000485397 MYO1BO43795 1136 aa24.28■■□□□ 1.48
COL27A1-205ENST00000485397 RBM5P52756 815 aaKnown RBP eCLIP24.28■■□□□ 1.481e-12■■□□□ 13.9
COL27A1-205ENST00000485397 SPRYD7Q5W111 196 aa24.28■■□□□ 1.48
COL27A1-205ENST00000485397 ZNF296Q8WUU4 475 aaPredicted RBP24.28■■□□□ 1.48
COL27A1-205ENST00000485397 FAM84BQ96KN1 310 aaPredicted RBP24.28■■□□□ 1.48
COL27A1-205ENST00000485397 BICC1Q9H694 974 aaKnown RBP24.28■■□□□ 1.48
COL27A1-205ENST00000485397 VEZTQ9HBM0 779 aa24.28■■□□□ 1.48
COL27A1-205ENST00000485397 RIPOR2Q9Y4F9 1068 aa24.28■■□□□ 1.48
COL27A1-205ENST00000485397 HIBADHP31937 336 aaKnown RBP24.27■■□□□ 1.48
COL27A1-205ENST00000485397 PPP2R3BQ9Y5P8 575 aa24.27■■□□□ 1.48
COL27A1-205ENST00000485397 SSC5DA1L4H1 1573 aa24.27■■□□□ 1.48
COL27A1-205ENST00000485397 SREBF2Q12772 1141 aa24.26■■□□□ 1.47
COL27A1-205ENST00000485397 MAP3K11Q16584 847 aa24.26■■□□□ 1.47
COL27A1-205ENST00000485397 MFSD14BQ5SR56 506 aa24.26■■□□□ 1.47
COL27A1-205ENST00000485397 RABL6Q3YEC7 729 aaPredicted RBP24.25■■□□□ 1.47
COL27A1-205ENST00000485397 NBPF12Q5TAG4 269 aaPredicted RBP24.25■■□□□ 1.47
COL27A1-205ENST00000485397 ANKRD44Q8N8A2 993 aa24.25■■□□□ 1.47
COL27A1-205ENST00000485397 SLC10A4Q96EP9 437 aa24.25■■□□□ 1.47
COL27A1-205ENST00000485397 CLMNQ96JQ2 1002 aa24.25■■□□□ 1.47
COL27A1-205ENST00000485397 R3HDMLQ9H3Y0 253 aa24.25■■□□□ 1.47
COL27A1-205ENST00000485397 TTF2Q9UNY4 1162 aaKnown RBP24.25■■□□□ 1.47
COL27A1-205ENST00000485397 GPR25O00155 361 aa24.24■■□□□ 1.47
COL27A1-205ENST00000485397 PPP1R12BO60237 982 aaPredicted RBP24.24■■□□□ 1.47
COL27A1-205ENST00000485397 SOX10P56693 466 aa24.24■■□□□ 1.47
COL27A1-205ENST00000485397 LRRC24Q50LG9 513 aa24.24■■□□□ 1.47
COL27A1-205ENST00000485397 SSH1Q8WYL5 1049 aa24.24■■□□□ 1.47
COL27A1-205ENST00000485397 MROH5Q6ZUA9 1318 aa24.24■■□□□ 1.47
COL27A1-205ENST00000485397 RASA3Q14644 834 aa24.23■■□□□ 1.47
COL27A1-205ENST00000485397 SUPT20HL1Q3ZLR7 823 aa24.23■■□□□ 1.47
COL27A1-205ENST00000485397 ECM29Q5VYK3 1845 aa24.22■■□□□ 1.47
COL27A1-205ENST00000485397 PTPRCP08575 1304 aa24.22■■□□□ 1.47
COL27A1-205ENST00000485397 E9PSI1 815 aa24.22■■□□□ 1.47
COL27A1-205ENST00000485397 FBXO33Q7Z6M2 555 aa24.22■■□□□ 1.47
COL27A1-205ENST00000485397 ZNF70Q9UC06 446 aaPredicted RBP24.22■■□□□ 1.47
COL27A1-205ENST00000485397 IQSEC3Q9UPP2 1182 aaPredicted RBP24.22■■□□□ 1.47
COL27A1-205ENST00000485397 USP2O75604 605 aaPredicted RBP24.21■■□□□ 1.47
COL27A1-205ENST00000485397 GRIK5Q16478 980 aa24.21■■□□□ 1.47
COL27A1-205ENST00000485397 METTL24Q5JXM2 366 aa24.21■■□□□ 1.47
COL27A1-205ENST00000485397 KLHDC4Q8TBB5 520 aa24.21■■□□□ 1.47
COL27A1-205ENST00000485397 WNK4Q96J92 1243 aa24.21■■□□□ 1.47
COL27A1-205ENST00000485397 TDRD3Q9H7E2 651 aaKnown RBP24.21■■□□□ 1.47
COL27A1-205ENST00000485397 SERPINA10Q9UK55 444 aa24.21■■□□□ 1.47
COL27A1-205ENST00000485397 HPS5Q9UPZ3 1129 aa24.21■■□□□ 1.47
COL27A1-205ENST00000485397 SLFN5Q08AF3 891 aa24.2■■□□□ 1.46
COL27A1-205ENST00000485397 SPDYE2Q495Y8 402 aa24.2■■□□□ 1.46
COL27A1-205ENST00000485397 NOM1Q5C9Z4 860 aaKnown RBP24.2■■□□□ 1.46
COL27A1-205ENST00000485397 CFHR5Q9BXR6 569 aa24.2■■□□□ 1.46
COL27A1-205ENST00000485397 USP44Q9H0E7 712 aa24.2■■□□□ 1.46
COL27A1-205ENST00000485397 MANSC4A6NHS7 340 aaPredicted RBP24.19■■□□□ 1.46
COL27A1-205ENST00000485397 CHAF1AQ13111 956 aaPredicted RBP24.19■■□□□ 1.46
COL27A1-205ENST00000485397 VPS37DQ86XT2 251 aa24.19■■□□□ 1.46
COL27A1-205ENST00000485397 DZIP1LQ8IYY4 767 aaKnown RBP24.19■■□□□ 1.46
COL27A1-205ENST00000485397 VGLL2Q8N8G2 317 aa24.19■■□□□ 1.46
COL27A1-205ENST00000485397 FKTNO75072 461 aa24.18■■□□□ 1.46
COL27A1-205ENST00000485397 ZBTB48P10074 688 aaPredicted RBP24.18■■□□□ 1.46
COL27A1-205ENST00000485397 CRKP46108 304 aa24.18■■□□□ 1.46
COL27A1-205ENST00000485397 IREB2P48200 963 aaKnown RBP24.18■■□□□ 1.46
COL27A1-205ENST00000485397 PKN2Q16513 984 aaKnown RBP24.18■■□□□ 1.46
COL27A1-205ENST00000485397 IFNL1Q8IU54 200 aa24.18■■□□□ 1.46
COL27A1-205ENST00000485397 UNCXA6NJT0 531 aa24.17■■□□□ 1.46
COL27A1-205ENST00000485397 PDE8BO95263 885 aa24.17■■□□□ 1.46
COL27A1-205ENST00000485397 ALDH1A1P00352 501 aa24.17■■□□□ 1.46
COL27A1-205ENST00000485397 GJA5P36382 358 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms